RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 FBXO38Q6PIJ6 1188 aa17.31■□□□□ 0.36
PNKP-230ENST00000638016 RBM12BQ8IXT5 1001 aaKnown RBP17.31■□□□□ 0.36
PNKP-230ENST00000638016 STYXQ8WUJ0 223 aa17.31■□□□□ 0.36
PNKP-230ENST00000638016 LRRC45Q96CN5 670 aa17.31■□□□□ 0.36
PNKP-230ENST00000638016 LINC00615Q96LM1 132 aaPredicted RBP17.31■□□□□ 0.36
PNKP-230ENST00000638016 OR6C1Q96RD1 312 aa17.31■□□□□ 0.36
PNKP-230ENST00000638016 TLR10Q9BXR5 811 aa17.31■□□□□ 0.36
PNKP-230ENST00000638016 ASPSCR1Q9BZE9 553 aa17.31■□□□□ 0.36
PNKP-230ENST00000638016 FBXO8Q9NRD0 319 aa17.31■□□□□ 0.36
PNKP-230ENST00000638016 RAB6BQ9NRW1 208 aa17.31■□□□□ 0.36
PNKP-230ENST00000638016 CFAP46Q8IYW2 2715 aa17.31■□□□□ 0.36
PNKP-230ENST00000638016 IGHV5-51A0A0C4DH38 117 aa17.3■□□□□ 0.36
PNKP-230ENST00000638016 LOC101059948A0A1B0GTJ6 334 aa17.3■□□□□ 0.36
PNKP-230ENST00000638016 CCDC162PA2VCL2 907 aa17.3■□□□□ 0.36
PNKP-230ENST00000638016 POLR1CO15160 346 aaPredicted RBP17.3■□□□□ 0.36
PNKP-230ENST00000638016 SLC35G4P0C7Q5 338 aa17.3■□□□□ 0.36
PNKP-230ENST00000638016 PDHA2P29803 388 aa17.3■□□□□ 0.36
PNKP-230ENST00000638016 STIP1P31948 543 aaKnown RBP17.3■□□□□ 0.36
PNKP-230ENST00000638016 FOXN2P32314 431 aa17.3■□□□□ 0.36
PNKP-230ENST00000638016 RPL22P35268 128 aaKnown RBP17.3■□□□□ 0.36
PNKP-230ENST00000638016 PREPP48147 710 aa17.3■□□□□ 0.36
PNKP-230ENST00000638016 ATP1A2P50993 1020 aa17.3■□□□□ 0.36
PNKP-230ENST00000638016 CAPRIN2Q6IMN6 1127 aaKnown RBP17.3■□□□□ 0.36
PNKP-230ENST00000638016 CEACAM20Q6UY09 585 aa17.3■□□□□ 0.36
PNKP-230ENST00000638016 NAPRTQ6XQN6 538 aa17.3■□□□□ 0.36
PNKP-230ENST00000638016 PPP1R21Q6ZMI0 780 aa17.3■□□□□ 0.36
PNKP-230ENST00000638016 PRSS42Q7Z5A4 293 aa17.3■□□□□ 0.36
PNKP-230ENST00000638016 EXD3Q8N9H8 876 aa17.3■□□□□ 0.36
PNKP-230ENST00000638016 DNAAF3Q8N9W5 541 aa17.3■□□□□ 0.36
PNKP-230ENST00000638016 OR13J1Q8NGT2 312 aa17.3■□□□□ 0.36
PNKP-230ENST00000638016 HM13Q8TCT9 377 aa17.3■□□□□ 0.36
PNKP-230ENST00000638016 MAP3K3Q99759 626 aa17.3■□□□□ 0.36
PNKP-230ENST00000638016 COG4Q9H9E3 785 aa17.3■□□□□ 0.36
PNKP-230ENST00000638016 SLC24A2Q9UI40 661 aa17.3■□□□□ 0.36
PNKP-230ENST00000638016 SPTBP11277 2137 aa17.3■□□□□ 0.36
PNKP-230ENST00000638016 ZNF462Q96JM2 2506 aa17.29■□□□□ 0.36
PNKP-230ENST00000638016 TK2O00142 265 aa17.29■□□□□ 0.36
PNKP-230ENST00000638016 PSMD3O43242 534 aa17.29■□□□□ 0.36
PNKP-230ENST00000638016 SUN1O94901 812 aa17.29■□□□□ 0.36
PNKP-230ENST00000638016 TIAF1O95411 115 aa17.29■□□□□ 0.36
PNKP-230ENST00000638016 DLGAP3O95886 979 aa17.29■□□□□ 0.36
PNKP-230ENST00000638016 FGGP02679 453 aa17.29■□□□□ 0.36
PNKP-230ENST00000638016 RALBP11234 206 aa17.29■□□□□ 0.36
PNKP-230ENST00000638016 MSNP26038 577 aaKnown RBP17.29■□□□□ 0.36
PNKP-230ENST00000638016 KCNJ1P48048 391 aa17.29■□□□□ 0.36
PNKP-230ENST00000638016 LMAN1P49257 510 aa17.29■□□□□ 0.36
PNKP-230ENST00000638016 CACNG1Q06432 222 aa17.29■□□□□ 0.36
PNKP-230ENST00000638016 CDH17Q12864 832 aa17.29■□□□□ 0.36
PNKP-230ENST00000638016 SEMA5AQ13591 1074 aa17.29■□□□□ 0.36
PNKP-230ENST00000638016 GSE1Q14687 1217 aa17.29■□□□□ 0.36
PNKP-230ENST00000638016 GPR33Q49SQ1 333 aa17.29■□□□□ 0.36
PNKP-230ENST00000638016 KLHL6Q8WZ60 621 aa17.29■□□□□ 0.36
PNKP-230ENST00000638016 ALS2CR12Q96Q35 445 aa17.29■□□□□ 0.36
PNKP-230ENST00000638016 SLC12A9Q9BXP2 914 aa17.29■□□□□ 0.36
PNKP-230ENST00000638016 SMARCAL1Q9NZC9 954 aa17.29■□□□□ 0.36
PNKP-230ENST00000638016 EPHA6Q9UF33 1036 aa17.29■□□□□ 0.36
PNKP-230ENST00000638016 ACSL5Q9ULC5 683 aa17.29■□□□□ 0.36
PNKP-230ENST00000638016 OR6C74A6NCV1 312 aa17.28■□□□□ 0.36
PNKP-230ENST00000638016 OR5K3A6NET4 321 aa17.28■□□□□ 0.36
PNKP-230ENST00000638016 CFAP99D6REC4 459 aa17.28■□□□□ 0.36
PNKP-230ENST00000638016 E7EVH7 732 aa17.28■□□□□ 0.36
PNKP-230ENST00000638016 OR1I1O60431 355 aa17.28■□□□□ 0.36
PNKP-230ENST00000638016 APRTP07741 180 aa17.28■□□□□ 0.36
PNKP-230ENST00000638016 FOLR1P15328 257 aa17.28■□□□□ 0.36
PNKP-230ENST00000638016 PSMA3P25788 255 aa17.28■□□□□ 0.36
PNKP-230ENST00000638016 FDFT1P37268 417 aa17.28■□□□□ 0.36
PNKP-230ENST00000638016 CRADDP78560 199 aa17.28■□□□□ 0.36
PNKP-230ENST00000638016 SEMA3AQ14563 771 aa17.28■□□□□ 0.36
PNKP-230ENST00000638016 ZNF662Q6ZS27 426 aa17.28■□□□□ 0.36
PNKP-230ENST00000638016 LINC00523Q86TU6 105 aa17.28■□□□□ 0.36
PNKP-230ENST00000638016 NLGN4XQ8N0W4 816 aa17.28■□□□□ 0.36
PNKP-230ENST00000638016 CCDC89Q8N998 374 aa17.28■□□□□ 0.36
PNKP-230ENST00000638016 LSM14AQ8ND56 463 aaKnown RBP17.28■□□□□ 0.36
PNKP-230ENST00000638016 PHC3Q8NDX5 983 aa17.28■□□□□ 0.36
PNKP-230ENST00000638016 NLGN4YQ8NFZ3 816 aaPredicted RBP17.28■□□□□ 0.36
PNKP-230ENST00000638016 HDAC10Q969S8 669 aa17.28■□□□□ 0.36
PNKP-230ENST00000638016 ZDHHC12Q96GR4 267 aa17.28■□□□□ 0.36
PNKP-230ENST00000638016 TEFMQ96QE5 360 aaKnown RBP17.28■□□□□ 0.36
PNKP-230ENST00000638016 C19orf43Q9BQ61 176 aa17.28■□□□□ 0.36
PNKP-230ENST00000638016 FRMD8P1Q9BZ68 369 aaPredicted RBP17.28■□□□□ 0.36
PNKP-230ENST00000638016 ULBP3Q9BZM4 244 aa17.28■□□□□ 0.36
PNKP-230ENST00000638016 RAB33BQ9H082 229 aa17.28■□□□□ 0.36
PNKP-230ENST00000638016 OR52A5Q9H2C5 316 aa17.28■□□□□ 0.36
PNKP-230ENST00000638016 KIR3DX1Q9H7L2 352 aa17.28■□□□□ 0.36
PNKP-230ENST00000638016 CASS4Q9NQ75 786 aa17.28■□□□□ 0.36
PNKP-230ENST00000638016 IL17BQ9UHF5 180 aa17.28■□□□□ 0.36
PNKP-230ENST00000638016 PPP2R2CQ9Y2T4 447 aa17.28■□□□□ 0.36
PNKP-230ENST00000638016 TMEM184BQ9Y519 407 aaPredicted RBP17.28■□□□□ 0.36
PNKP-230ENST00000638016 MRPS18BQ9Y676 258 aaKnown RBP17.28■□□□□ 0.36
PNKP-230ENST00000638016 BSNQ9UPA5 3926 aa17.27■□□□□ 0.36
PNKP-230ENST00000638016 CEP104O60308 925 aa17.27■□□□□ 0.36
PNKP-230ENST00000638016 GOT2P00505 430 aaKnown RBP17.27■□□□□ 0.36
PNKP-230ENST00000638016 FAM87AP0C7U9 286 aa17.27■□□□□ 0.36
PNKP-230ENST00000638016 EBLN1P0CF75 366 aa17.27■□□□□ 0.36
PNKP-230ENST00000638016 KPNA2P52292 529 aaKnown RBP17.27■□□□□ 0.36
PNKP-230ENST00000638016 TERF1P54274 439 aa17.27■□□□□ 0.36
PNKP-230ENST00000638016 C19orf57Q0VDD7 668 aa17.27■□□□□ 0.36
PNKP-230ENST00000638016 BRD3Q15059 726 aa17.27■□□□□ 0.36
PNKP-230ENST00000638016 TBR1Q16650 682 aa17.27■□□□□ 0.36
PNKP-230ENST00000638016 TSTD2Q5T7W7 516 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms