RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 C1QTNF3Q9BXJ4 246 aa15.08■□□□□ 0
CLN6-219ENST00000637329 STN1Q9H668 368 aaKnown RBP15.08■□□□□ 0
CLN6-219ENST00000637329 PHPT1Q9NRX4 125 aaPredicted RBP15.08■□□□□ 0
CLN6-219ENST00000637329 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.08■□□□□ 0
CLN6-219ENST00000637329 ARL2BPQ9Y2Y0 163 aa15.08■□□□□ 0
CLN6-219ENST00000637329 NEMP2A6NFY4 417 aa15.07■□□□□ 0
CLN6-219ENST00000637329 UBXN8O00124 270 aa15.07■□□□□ 0
CLN6-219ENST00000637329 CHUKO15111 745 aa15.07■□□□□ 0
CLN6-219ENST00000637329 RAD51BO15315 384 aa15.07■□□□□ 0
CLN6-219ENST00000637329 SNX2O60749 519 aa15.07■□□□□ 0
CLN6-219ENST00000637329 LILRB5O75023 590 aa15.07■□□□□ 0
CLN6-219ENST00000637329 SLCO2B1O94956 709 aa15.07■□□□□ 0
CLN6-219ENST00000637329 S100BP04271 92 aaPredicted RBP15.07■□□□□ 0
CLN6-219ENST00000637329 HOXC4P09017 264 aaPredicted RBP15.07■□□□□ 0
CLN6-219ENST00000637329 OXTRP30559 389 aa15.07■□□□□ 0
CLN6-219ENST00000637329 NUDT1P36639 197 aa15.07■□□□□ 0
CLN6-219ENST00000637329 CDKL1Q00532 357 aa15.07■□□□□ 0
CLN6-219ENST00000637329 TCF15Q12870 199 aa15.07■□□□□ 0
CLN6-219ENST00000637329 PRKAA1Q13131 559 aa15.07■□□□□ 0
CLN6-219ENST00000637329 TGFBIQ15582 683 aa15.07■□□□□ 0
CLN6-219ENST00000637329 ZSCAN26Q16670 478 aa15.07■□□□□ 0
CLN6-219ENST00000637329 ZNF658BQ4V348 819 aaPredicted RBP15.07■□□□□ 0
CLN6-219ENST00000637329 ZNF678Q5SXM1 525 aa15.07■□□□□ 0
CLN6-219ENST00000637329 METTL2BQ6P1Q9 378 aaKnown RBP15.07■□□□□ 0
CLN6-219ENST00000637329 TMEM220Q6QAJ8 160 aa15.07■□□□□ 0
CLN6-219ENST00000637329 TRAPPC5Q8IUR0 188 aa15.07■□□□□ 0
CLN6-219ENST00000637329 WDR75Q8IWA0 830 aaKnown RBP15.07■□□□□ 0
CLN6-219ENST00000637329 SIX5Q8N196 739 aa15.07■□□□□ 0
CLN6-219ENST00000637329 FBXL6Q8N531 539 aa15.07■□□□□ 0
CLN6-219ENST00000637329 OXR1Q8N573 874 aa15.07■□□□□ 0
CLN6-219ENST00000637329 PTGR2Q8N8N7 351 aaPredicted RBP15.07■□□□□ 0
CLN6-219ENST00000637329 PDPRQ8NCN5 879 aa15.07■□□□□ 0
CLN6-219ENST00000637329 TSTD1Q8NFU3 115 aa15.07■□□□□ 0
CLN6-219ENST00000637329 HM13Q8TCT9 377 aa15.07■□□□□ 0
CLN6-219ENST00000637329 NAT14Q8WUY8 206 aa15.07■□□□□ 0
CLN6-219ENST00000637329 STON2Q8WXE9 905 aa15.07■□□□□ 0
CLN6-219ENST00000637329 TMEM159Q96B96 161 aa15.07■□□□□ 0
CLN6-219ENST00000637329 OR2AG1Q9H205 316 aa15.07■□□□□ 0
CLN6-219ENST00000637329 EML4Q9HC35 981 aaKnown RBP15.07■□□□□ 0
CLN6-219ENST00000637329 NPHS2Q9NP85 383 aa15.07■□□□□ 0
CLN6-219ENST00000637329 ATXN10Q9UBB4 475 aa15.07■□□□□ 0
CLN6-219ENST00000637329 MBD1Q9UIS9 605 aaPredicted RBP15.07■□□□□ 0
CLN6-219ENST00000637329 IKZF3Q9UKT9 509 aa15.07■□□□□ 0
CLN6-219ENST00000637329 CDYLQ9Y232 598 aa15.07■□□□□ 0
CLN6-219ENST00000637329 RAP2CQ9Y3L5 183 aa15.07■□□□□ 0
CLN6-219ENST00000637329 DNMT3AQ9Y6K1 912 aaPredicted RBP15.07■□□□□ 0
CLN6-219ENST00000637329 ZFHX2Q9C0A1 2572 aaPredicted RBP15.07■□□□□ 0
CLN6-219ENST00000637329 SLC5A10A0PJK1 596 aa15.06■□□□□ 0
CLN6-219ENST00000637329 TOR1BO14657 336 aa15.06■□□□□ 0
CLN6-219ENST00000637329 LATO43561 262 aa15.06■□□□□ 0
CLN6-219ENST00000637329 ITM2AO43736 263 aa15.06■□□□□ 0
CLN6-219ENST00000637329 ZNF217O75362 1048 aa15.06■□□□□ 0
CLN6-219ENST00000637329 SEMA4FO95754 770 aa15.06■□□□□ 0
CLN6-219ENST00000637329 RPS17P08708 135 aaKnown RBP15.06■□□□□ 0
CLN6-219ENST00000637329 ALOX15P16050 662 aaPredicted RBP15.06■□□□□ 0
CLN6-219ENST00000637329 VCLP18206 1134 aa15.06■□□□□ 0
CLN6-219ENST00000637329 IGFALSP35858 605 aa15.06■□□□□ 0
CLN6-219ENST00000637329 RPS9P46781 194 aaKnown RBP15.06■□□□□ 0
CLN6-219ENST00000637329 KCNC1P48547 511 aa15.06■□□□□ 0
CLN6-219ENST00000637329 CCR5P51681 352 aa15.06■□□□□ 0
CLN6-219ENST00000637329 KIAA1024LP59773 190 aa15.06■□□□□ 0
CLN6-219ENST00000637329 PPP2CBP62714 309 aa15.06■□□□□ 0
CLN6-219ENST00000637329 PPP2CAP67775 309 aa15.06■□□□□ 0
CLN6-219ENST00000637329 HSPA14Q0VDF9 509 aa15.06■□□□□ 0
CLN6-219ENST00000637329 FZD5Q13467 585 aa15.06■□□□□ 0
CLN6-219ENST00000637329 INPP5AQ14642 412 aa15.06■□□□□ 0
CLN6-219ENST00000637329 SETDB1Q15047 1291 aa15.06■□□□□ 0
CLN6-219ENST00000637329 ZNF648Q5T619 568 aaPredicted RBP15.06■□□□□ 0
CLN6-219ENST00000637329 CYHR1Q6ZMK1 362 aa15.06■□□□□ 0
CLN6-219ENST00000637329 TRIM74Q86UV6 250 aa15.06■□□□□ 0
CLN6-219ENST00000637329 RASGRP3Q8IV61 690 aa15.06■□□□□ 0
CLN6-219ENST00000637329 PJA1Q8NG27 643 aa15.06■□□□□ 0
CLN6-219ENST00000637329 UBTD2Q8WUN7 234 aa15.06■□□□□ 0
CLN6-219ENST00000637329 C10orf82Q8WW14 230 aa15.06■□□□□ 0
CLN6-219ENST00000637329 EXT2Q93063 718 aa15.06■□□□□ 0
CLN6-219ENST00000637329 PHF21BQ96EK2 531 aa15.06■□□□□ 0
CLN6-219ENST00000637329 C20orf27Q9GZN8 174 aa15.06■□□□□ 0
CLN6-219ENST00000637329 CHRDQ9H2X0 955 aa15.06■□□□□ 0
CLN6-219ENST00000637329 RMI1Q9H9A7 625 aa15.06■□□□□ 0
CLN6-219ENST00000637329 TBC1D17Q9HA65 648 aa15.06■□□□□ 0
CLN6-219ENST00000637329 CYP4F12Q9HCS2 524 aa15.06■□□□□ 0
CLN6-219ENST00000637329 MBNL1Q9NR56 388 aaKnown RBP15.06■□□□□ 0
CLN6-219ENST00000637329 KCNK4Q9NYG8 393 aa15.06■□□□□ 0
CLN6-219ENST00000637329 CD274Q9NZQ7 290 aa15.06■□□□□ 0
CLN6-219ENST00000637329 DNAJC16Q9Y2G8 782 aa15.06■□□□□ 0
CLN6-219ENST00000637329 TNPO3Q9Y5L0 923 aaKnown RBP15.06■□□□□ 0
CLN6-219ENST00000637329 USH1CQ9Y6N9 552 aa15.06■□□□□ 0
CLN6-219ENST00000637329 PTPRZ1P23471 2315 aaPredicted RBP15.05■□□□□ 0
CLN6-219ENST00000637329 PABPN1LA6NDY0 278 aaKnown RBP15.05■□□□□ -0
CLN6-219ENST00000637329 PRR23AA6NEV1 266 aa15.05■□□□□ -0
CLN6-219ENST00000637329 FAM170BA6NMN3 283 aa15.05■□□□□ -0
CLN6-219ENST00000637329 SLCO1B7G3V0H7 640 aa15.05■□□□□ -0
CLN6-219ENST00000637329 EBAG9O00559 213 aa15.05■□□□□ -0
CLN6-219ENST00000637329 FFAR2O15552 330 aa15.05■□□□□ -0
CLN6-219ENST00000637329 LYPLA1O75608 230 aaPredicted RBP15.05■□□□□ -0
CLN6-219ENST00000637329 PAK4O96013 591 aaPredicted RBP15.05■□□□□ -0
CLN6-219ENST00000637329 ZNF8P17098 575 aaPredicted RBP15.05■□□□□ -0
CLN6-219ENST00000637329 HNRNPA2B1P22626 353 aaKnown RBP15.05■□□□□ -0
CLN6-219ENST00000637329 ARRB2P32121 409 aa15.05■□□□□ -0
CLN6-219ENST00000637329 ACSL1P33121 698 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms