RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 JAM2P57087 298 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 PDE1BQ01064 536 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 GOLGA8FQ08AF8 430 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 GOLGA8DPQ0D2H9 430 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 MERTKQ12866 999 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 SLC13A2Q13183 592 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 PDCLQ13371 301 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 ART3Q13508 389 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 GRAPQ13588 217 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 E2F2Q14209 437 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 GPR176Q14439 515 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 KCNAB1Q14722 419 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 PRKD1Q15139 912 aaPredicted RBP2.97□□□□□ -1.93
VIM-210ENST00000637053 EPHA7Q15375 998 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 TESK1Q15569 626 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 ADRM1Q16186 407 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 CSRP2Q16527 193 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 MAN2A1Q16706 1144 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 SYT16Q17RD7 645 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 HKDC1Q2TB90 917 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 LSM12Q3MHD2 195 aaKnown RBP2.97□□□□□ -1.93
VIM-210ENST00000637053 TRIM60Q495X7 471 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 GALNTL6Q49A17 601 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 CERKLQ49MI3 558 aaPredicted RBP2.97□□□□□ -1.93
VIM-210ENST00000637053 DNAL1Q4LDG9 190 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 EEF1AKMT2Q5JPI9 291 aaKnown RBP2.97□□□□□ -1.93
VIM-210ENST00000637053 Q5PR19 223 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 PHYHD1Q5SRE7 291 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 PRAMEF18Q5VWM3 479 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 CARD17Q5XLA6 110 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 KIAA0930Q6ICG6 404 aaPredicted RBP2.97□□□□□ -1.93
VIM-210ENST00000637053 TCTN3Q6NUS6 607 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 MAMDC4Q6UXC1 1216 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 SLC30A10Q6XR72 485 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 CCDC121Q6ZUS5 278 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 ESPNLQ6ZVH7 1005 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 TRILQ7L0X0 811 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 BHLHA15Q7RTS1 189 aaPredicted RBP2.97□□□□□ -1.93
VIM-210ENST00000637053 DCXRQ7Z4W1 244 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 RTN4RL2Q86UN3 420 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 GAS2L3Q86XJ1 694 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 PROSER1Q86XN7 944 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 NRROSQ86YC3 692 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 LYSMD2Q8IV50 215 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 ZDHHC21Q8IVQ6 265 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 CCDC28AQ8IWP9 274 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 CHERPQ8IWX8 916 aaKnown RBP2.97□□□□□ -1.93
VIM-210ENST00000637053 PM20D2Q8IYS1 436 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 KATNAL2Q8IYT4 538 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 MMP21Q8N119 569 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 GHDCQ8N2G8 530 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 FIBCD1Q8N539 461 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 DCBLD1Q8N8Z6 715 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 TMEM116Q8NCL8 245 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 RDM1Q8NG50 284 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 OR8J2Q8NGG1 315 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 OR2I1PQ8NGU4 316 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 ZNF596Q8TC21 504 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 SLC20A1Q8WUM9 679 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 HEXDCQ8WVB3 486 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 OSCP1Q8WVF1 389 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 CAPSLQ8WWF8 208 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 NEU4Q8WWR8 484 aaPredicted RBP2.97□□□□□ -1.93
VIM-210ENST00000637053 ZCCHC14Q8WYQ9 949 aaKnown RBP2.97□□□□□ -1.93
VIM-210ENST00000637053 ROBO4Q8WZ75 1007 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 RAB24Q969Q5 203 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 RAD51AP1Q96B01 352 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 SAAL1Q96ER3 474 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 PGAM5Q96HS1 289 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 ZSWIM3Q96MP5 696 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 QRFPRQ96P65 431 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 TRIB1Q96RU8 372 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 TESK2Q96S53 571 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 ZNF607Q96SK3 696 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 ADOQ96SZ5 270 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 PCYT2Q99447 389 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 PAFAH2Q99487 392 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 RIT2Q99578 217 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 ASCL2Q99929 193 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 CITED1Q99966 193 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 BPIFA3Q9BQP9 254 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 PIGQQ9BRB3 760 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 SRSF8Q9BRL6 282 aaKnown RBP2.97□□□□□ -1.93
VIM-210ENST00000637053 C17orf80Q9BSJ5 609 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 ZNF577Q9BSK1 485 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 NUP58Q9BVL2 599 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 PARD6BQ9BYG5 372 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 BLZF1Q9H2G9 400 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 LRMDAQ9H2I8 198 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 MTIF3Q9H2K0 278 aaKnown RBP2.97□□□□□ -1.93
VIM-210ENST00000637053 AKIRIN1Q9H9L7 192 aaPredicted RBP2.97□□□□□ -1.93
VIM-210ENST00000637053 RPF1Q9H9Y2 349 aaKnown RBP2.97□□□□□ -1.93
VIM-210ENST00000637053 PLEKHA2Q9HB19 425 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 PARVBQ9HBI1 364 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 NEK6Q9HC98 313 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 HEYLQ9NQ87 328 aaPredicted RBP2.97□□□□□ -1.93
VIM-210ENST00000637053 C12orf4Q9NQ89 552 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 PRMT7Q9NVM4 692 aaPredicted RBP2.97□□□□□ -1.93
VIM-210ENST00000637053 RIC8BQ9NVN3 520 aa2.97□□□□□ -1.93
VIM-210ENST00000637053 BEX4Q9NWD9 120 aaPredicted RBP2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms