RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 ERVK-10P10266 1014 aa15.16■□□□□ 0.02
CLN6-211ENST00000635754 ALDH4A1P30038 563 aa15.16■□□□□ 0.02
CLN6-211ENST00000635754 SLC19A1P41440 591 aa15.16■□□□□ 0.02
CLN6-211ENST00000635754 SLC1A2P43004 574 aa15.16■□□□□ 0.02
CLN6-211ENST00000635754 ADARP55265 1226 aaKnown RBP15.16■□□□□ 0.02
CLN6-211ENST00000635754 UBE2IP63279 158 aaKnown RBP15.16■□□□□ 0.02
CLN6-211ENST00000635754 PLOD1Q02809 727 aaPredicted RBP15.16■□□□□ 0.02
CLN6-211ENST00000635754 CTBP1Q13363 440 aa15.16■□□□□ 0.02
CLN6-211ENST00000635754 SPIDRQ14159 915 aa15.16■□□□□ 0.02
CLN6-211ENST00000635754 CLCA4Q14CN2 919 aa15.16■□□□□ 0.02
CLN6-211ENST00000635754 ZNF658BQ4V348 819 aaPredicted RBP15.16■□□□□ 0.02
CLN6-211ENST00000635754 XKR5Q6UX68 686 aa15.16■□□□□ 0.02
CLN6-211ENST00000635754 ZDHHC24Q6UX98 284 aa15.16■□□□□ 0.02
CLN6-211ENST00000635754 TMPRSS7Q7RTY8 843 aa15.16■□□□□ 0.02
CLN6-211ENST00000635754 CCDC25Q86WR0 208 aa15.16■□□□□ 0.02
CLN6-211ENST00000635754 DENND6AQ8IWF6 608 aa15.16■□□□□ 0.02
CLN6-211ENST00000635754 RBM12BQ8IXT5 1001 aaKnown RBP15.16■□□□□ 0.02
CLN6-211ENST00000635754 UNC5BQ8IZJ1 945 aa15.16■□□□□ 0.02
CLN6-211ENST00000635754 PYROXD1Q8WU10 500 aa15.16■□□□□ 0.02
CLN6-211ENST00000635754 C12orf66Q96MD2 445 aa15.16■□□□□ 0.02
CLN6-211ENST00000635754 SLC38A3Q99624 504 aa15.16■□□□□ 0.02
CLN6-211ENST00000635754 FAM129AQ9BZQ8 928 aa15.16■□□□□ 0.02
CLN6-211ENST00000635754 FOXP3Q9BZS1 431 aa15.16■□□□□ 0.02
CLN6-211ENST00000635754 LRRN3Q9H3W5 708 aa15.16■□□□□ 0.02
CLN6-211ENST00000635754 EPB41L5Q9HCM4 733 aa15.16■□□□□ 0.02
CLN6-211ENST00000635754 PPANQ9NQ55 473 aaKnown RBP15.16■□□□□ 0.02
CLN6-211ENST00000635754 KCNK4Q9NYG8 393 aa15.16■□□□□ 0.02
CLN6-211ENST00000635754 ZNF624Q9P2J8 865 aaPredicted RBP15.16■□□□□ 0.02
CLN6-211ENST00000635754 DMGDHQ9UI17 866 aaKnown RBP15.16■□□□□ 0.02
CLN6-211ENST00000635754 CLCA2Q9UQC9 943 aa15.16■□□□□ 0.02
CLN6-211ENST00000635754 CRYL1Q9Y2S2 319 aa15.16■□□□□ 0.02
CLN6-211ENST00000635754 SPEGQ15772 3267 aa15.15■□□□□ 0.02
CLN6-211ENST00000635754 H3BMM5 538 aa15.15■□□□□ 0.02
CLN6-211ENST00000635754 IFRD1O00458 451 aaPredicted RBP15.15■□□□□ 0.02
CLN6-211ENST00000635754 S1PR4O95977 384 aa15.15■□□□□ 0.02
CLN6-211ENST00000635754 MTHFD1P11586 935 aaKnown RBP15.15■□□□□ 0.02
CLN6-211ENST00000635754 JUPP14923 745 aa15.15■□□□□ 0.02
CLN6-211ENST00000635754 ITGB6P18564 788 aa15.15■□□□□ 0.02
CLN6-211ENST00000635754 FMO4P31512 558 aa15.15■□□□□ 0.02
CLN6-211ENST00000635754 PREPP48147 710 aa15.15■□□□□ 0.02
CLN6-211ENST00000635754 PPM1FP49593 454 aaPredicted RBP15.15■□□□□ 0.02
CLN6-211ENST00000635754 OR1D5P58170 312 aa15.15■□□□□ 0.02
CLN6-211ENST00000635754 CCL7P80098 99 aa15.15■□□□□ 0.02
CLN6-211ENST00000635754 FRG1Q14331 258 aaKnown RBP15.15■□□□□ 0.02
CLN6-211ENST00000635754 BRD3Q15059 726 aa15.15■□□□□ 0.02
CLN6-211ENST00000635754 TMED2Q15363 201 aa15.15■□□□□ 0.02
CLN6-211ENST00000635754 RPE65Q16518 533 aa15.15■□□□□ 0.02
CLN6-211ENST00000635754 ZNF761Q86XN6 746 aaPredicted RBP15.15■□□□□ 0.02
CLN6-211ENST00000635754 GSDMBQ8TAX9 411 aa15.15■□□□□ 0.02
CLN6-211ENST00000635754 TMEM159Q96B96 161 aa15.15■□□□□ 0.02
CLN6-211ENST00000635754 RMDN2Q96LZ7 410 aa15.15■□□□□ 0.02
CLN6-211ENST00000635754 BIRC8Q96P09 236 aa15.15■□□□□ 0.02
CLN6-211ENST00000635754 GFM1Q96RP9 751 aaKnown RBP15.15■□□□□ 0.02
CLN6-211ENST00000635754 SCNM1Q9BWG6 230 aa15.15■□□□□ 0.02
CLN6-211ENST00000635754 CCDC68Q9H2F9 335 aa15.15■□□□□ 0.02
CLN6-211ENST00000635754 L2HGDHQ9H9P8 463 aa15.15■□□□□ 0.02
CLN6-211ENST00000635754 PLAC1Q9HBJ0 212 aa15.15■□□□□ 0.02
CLN6-211ENST00000635754 FBXO6Q9NRD1 293 aaPredicted RBP15.15■□□□□ 0.02
CLN6-211ENST00000635754 IMP3Q9NV31 184 aaKnown RBP15.15■□□□□ 0.02
CLN6-211ENST00000635754 FBXO5Q9UKT4 447 aa15.15■□□□□ 0.02
CLN6-211ENST00000635754 WASF3Q9UPY6 502 aa15.15■□□□□ 0.02
CLN6-211ENST00000635754 CFAP20Q9Y6A4 193 aaKnown RBP15.15■□□□□ 0.02
CLN6-211ENST00000635754 COL27A1Q8IZC6 1860 aaPredicted RBP15.14■□□□□ 0.01
CLN6-211ENST00000635754 A0A1W2PQM1 296 aa15.14■□□□□ 0.01
CLN6-211ENST00000635754 IQCF5A8MTL0 148 aa15.14■□□□□ 0.01
CLN6-211ENST00000635754 BHMG1C9JSJ3 638 aaPredicted RBP15.14■□□□□ 0.01
CLN6-211ENST00000635754 NTN3O00634 580 aaPredicted RBP15.14■□□□□ 0.01
CLN6-211ENST00000635754 KPNA5O15131 536 aa15.14■□□□□ 0.01
CLN6-211ENST00000635754 TOP3BO95985 862 aaKnown RBP15.14■□□□□ 0.01
CLN6-211ENST00000635754 MT-CO3P00414 261 aa15.14■□□□□ 0.01
CLN6-211ENST00000635754 APOA4P06727 396 aa15.14■□□□□ 0.01
CLN6-211ENST00000635754 CD151P48509 253 aa15.14■□□□□ 0.01
CLN6-211ENST00000635754 EPHA4P54764 986 aa15.14■□□□□ 0.01
CLN6-211ENST00000635754 CLDN6P56747 220 aa15.14■□□□□ 0.01
CLN6-211ENST00000635754 GPLD1P80108 840 aa15.14■□□□□ 0.01
CLN6-211ENST00000635754 FOXK2Q01167 660 aa15.14■□□□□ 0.01
CLN6-211ENST00000635754 AMZ1Q400G9 498 aa15.14■□□□□ 0.01
CLN6-211ENST00000635754 ZNF789Q5FWF6 425 aa15.14■□□□□ 0.01
CLN6-211ENST00000635754 CTSL3PQ5NE16 218 aa15.14■□□□□ 0.01
CLN6-211ENST00000635754 CDCP2Q5VXM1 449 aa15.14■□□□□ 0.01
CLN6-211ENST00000635754 RBM44Q6ZP01 1051 aaKnown RBP15.14■□□□□ 0.01
CLN6-211ENST00000635754 PDZD3Q86UT5 571 aa15.14■□□□□ 0.01
CLN6-211ENST00000635754 CNTN4Q8IWV2 1026 aa15.14■□□□□ 0.01
CLN6-211ENST00000635754 PALM2Q8IXS6 379 aa15.14■□□□□ 0.01
CLN6-211ENST00000635754 KRT222Q8N1A0 295 aa15.14■□□□□ 0.01
CLN6-211ENST00000635754 C2CD4AQ8NCU7 369 aaPredicted RBP15.14■□□□□ 0.01
CLN6-211ENST00000635754 OR10G6Q8NH81 332 aa15.14■□□□□ 0.01
CLN6-211ENST00000635754 LKAAEAR1Q8TD35 194 aa15.14■□□□□ 0.01
CLN6-211ENST00000635754 ASZ1Q8WWH4 475 aa15.14■□□□□ 0.01
CLN6-211ENST00000635754 AHCYL2Q96HN2 611 aaKnown RBP15.14■□□□□ 0.01
CLN6-211ENST00000635754 DEPDC7Q96QD5 511 aa15.14■□□□□ 0.01
CLN6-211ENST00000635754 INSM2Q96T92 566 aaPredicted RBP15.14■□□□□ 0.01
CLN6-211ENST00000635754 ZMYND15Q9H091 742 aa15.14■□□□□ 0.01
CLN6-211ENST00000635754 OR52A5Q9H2C5 316 aa15.14■□□□□ 0.01
CLN6-211ENST00000635754 UCK1Q9HA47 277 aa15.14■□□□□ 0.01
CLN6-211ENST00000635754 SLC40A1Q9NP59 571 aa15.14■□□□□ 0.01
CLN6-211ENST00000635754 ZDHHC18Q9NUE0 388 aa15.14■□□□□ 0.01
CLN6-211ENST00000635754 MTRF1LQ9UGC7 380 aaKnown RBP15.14■□□□□ 0.01
CLN6-211ENST00000635754 KLK13Q9UKR3 277 aa15.14■□□□□ 0.01
CLN6-211ENST00000635754 ANGPTL2Q9UKU9 493 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms