RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 LINGO1Q96FE5 620 aa7.06□□□□□ -1.28
BRCA1-230ENST00000634433 SGCZQ96LD1 299 aa7.06□□□□□ -1.28
BRCA1-230ENST00000634433 PPP1R36Q96LQ0 422 aa7.06□□□□□ -1.28
BRCA1-230ENST00000634433 CATSPER2Q96P56 530 aa7.06□□□□□ -1.28
BRCA1-230ENST00000634433 SMIM14Q96QK8 99 aa7.06□□□□□ -1.28
BRCA1-230ENST00000634433 CCT7Q99832 543 aa7.06□□□□□ -1.28
BRCA1-230ENST00000634433 TACO1Q9BSH4 297 aaKnown RBP7.06□□□□□ -1.28
BRCA1-230ENST00000634433 C1QTNF3Q9BXJ4 246 aa7.06□□□□□ -1.28
BRCA1-230ENST00000634433 SMG9Q9H0W8 520 aaKnown RBP7.06□□□□□ -1.28
BRCA1-230ENST00000634433 ZNF385DQ9H6B1 395 aa7.06□□□□□ -1.28
BRCA1-230ENST00000634433 ZBTB26Q9HCK0 441 aa7.06□□□□□ -1.28
BRCA1-230ENST00000634433 MRPL40Q9NQ50 206 aaKnown RBP7.06□□□□□ -1.28
BRCA1-230ENST00000634433 ACSS2Q9NR19 701 aa7.06□□□□□ -1.28
BRCA1-230ENST00000634433 UBAP1Q9NZ09 502 aa7.06□□□□□ -1.28
BRCA1-230ENST00000634433 NUDT4Q9NZJ9 180 aa7.06□□□□□ -1.28
BRCA1-230ENST00000634433 MARK1Q9P0L2 795 aa7.06□□□□□ -1.28
BRCA1-230ENST00000634433 CRLS1Q9UJA2 301 aa7.06□□□□□ -1.28
BRCA1-230ENST00000634433 ANGPTL2Q9UKU9 493 aa7.06□□□□□ -1.28
BRCA1-230ENST00000634433 MED16Q9Y2X0 877 aa7.06□□□□□ -1.28
BRCA1-230ENST00000634433 L3MBTL1Q9Y468 752 aa7.06□□□□□ -1.28
BRCA1-230ENST00000634433 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.06□□□□□ -1.28
BRCA1-230ENST00000634433 A0A088AWK7 358 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 TRBV5-4A0A0C4DH59 114 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 FAM25EA8MYX2 175 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 WASH3PC4AMC7 463 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 NIPSNAP2O75323 286 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 ECI2O75521 394 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 RFPL2O75678 378 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 CLDN7O95471 211 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 CYP2A6P11509 494 aaPredicted RBP7.05□□□□□ -1.28
BRCA1-230ENST00000634433 MTHFD2P13995 350 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 TYRP14679 529 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 SYN1P17600 705 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 ACRV1P26436 265 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 EEF1DP29692 281 aaKnown RBP7.05□□□□□ -1.28
BRCA1-230ENST00000634433 ACTR3P61158 418 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 STX1BP61266 288 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 AP2B1P63010 937 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 CLCQ05315 142 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 ART3Q13508 389 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 TSNQ15631 228 aaKnown RBP7.05□□□□□ -1.28
BRCA1-230ENST00000634433 CDKN3Q16667 212 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 GEN1Q17RS7 908 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 TTLL9Q3SXZ7 439 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 FUT11Q495W5 492 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 KHDC1Q4VXA5 237 aaKnown RBP7.05□□□□□ -1.28
BRCA1-230ENST00000634433 AAGABQ6PD74 315 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 FAM151BQ6UXP7 276 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 ZER1Q7Z7L7 766 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 DEFB107AQ8IZN7 70 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 AHI1Q8N157 1196 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 FBXW8Q8N3Y1 598 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 OR56A4Q8NGH8 313 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 FBXO27Q8NI29 283 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 CD200R1Q8TD46 325 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 WFIKKN2Q8TEU8 576 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 EEF1AKMT1Q8WVE0 214 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 SLC39A7Q92504 469 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 FUBP1Q96AE4 644 aaKnown RBP7.05□□□□□ -1.28
BRCA1-230ENST00000634433 ECHDC3Q96DC8 303 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 RPL10LQ96L21 214 aaKnown RBP7.05□□□□□ -1.28
BRCA1-230ENST00000634433 PPM1MQ96MI6 270 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 NUSAP1Q9BXS6 441 aaKnown RBP7.05□□□□□ -1.28
BRCA1-230ENST00000634433 MRPL1Q9BYD6 325 aaKnown RBP7.05□□□□□ -1.28
BRCA1-230ENST00000634433 SARS2Q9NP81 518 aaKnown RBP7.05□□□□□ -1.28
BRCA1-230ENST00000634433 MID1IP1Q9NPA3 183 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 HPS4Q9NQG7 708 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 RAD18Q9NS91 495 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 CD274Q9NZQ7 290 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 CCL26Q9Y258 94 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 FIS1Q9Y3D6 152 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 COPG1Q9Y678 874 aaKnown RBP7.05□□□□□ -1.28
BRCA1-230ENST00000634433 MTCL1Q9Y4B5 1905 aaKnown RBP7.05□□□□□ -1.28
BRCA1-230ENST00000634433 ANKRD36A6QL64 1941 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 NPEPPSL1A6NEC2 478 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 TMEM233B4DJY2 109 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 SKAP2O75563 359 aaPredicted RBP7.05□□□□□ -1.28
BRCA1-230ENST00000634433 CDK14O94921 469 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 ASLP04424 464 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 BPIP17213 487 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 GM2AP17900 193 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 GNAZP19086 355 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 ITGAXP20702 1163 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 CTSOP43234 321 aaPredicted RBP7.05□□□□□ -1.28
BRCA1-230ENST00000634433 CLCN7P51798 805 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 CCNHP51946 323 aaPredicted RBP7.05□□□□□ -1.28
BRCA1-230ENST00000634433 SLC34A1Q06495 639 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 TBL3Q12788 808 aaKnown RBP7.05□□□□□ -1.28
BRCA1-230ENST00000634433 PCBP2Q15366 365 aaKnown RBP eCLIP7.05□□□□□ -1.282e-7■■■□□ 17.1
BRCA1-230ENST00000634433 ACSBG2Q5FVE4 666 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 PRSS36Q5K4E3 855 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 PGM2L1Q6PCE3 622 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 BRAT1Q6PJG6 821 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 BRICD5Q6PL45 260 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 CRTC1Q6UUV9 634 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 C6orf15Q6UXA7 325 aaPredicted RBP7.05□□□□□ -1.28
BRCA1-230ENST00000634433 GDPD4Q6W3E5 623 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 MACC1Q6ZN28 852 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 FRA10AC1Q70Z53 315 aa7.05□□□□□ -1.28
BRCA1-230ENST00000634433 ADGRG2Q8IZP9 1017 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms