RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 THOP1P52888 689 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 ARSFP54793 590 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 UCP3P55916 312 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 PTENP60484 403 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 LGALS3BPQ08380 585 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 SLFN5Q08AF3 891 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 CALCOCO2Q13137 446 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 PDE7AQ13946 482 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 TXNRD1Q16881 649 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 DPCR1Q3MIW9 517 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 PDLIM3Q53GG5 364 aaPredicted RBP4.79□□□□□ -1.64
SDCBP-213ENST00000630925 TMEM41BQ5BJD5 291 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 ZNF667Q5HYK9 610 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 EEF1DP3Q658K8 133 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 CFAP77Q6ZQR2 320 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 BZW1Q7L1Q6 419 aaKnown RBP4.79□□□□□ -1.64
SDCBP-213ENST00000630925 COPS6Q7L5N1 327 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 CENPVQ7Z7K6 275 aaPredicted RBP4.79□□□□□ -1.64
SDCBP-213ENST00000630925 TRABD2AQ86V40 505 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 LRRC56Q8IYG6 542 aaPredicted RBP4.79□□□□□ -1.64
SDCBP-213ENST00000630925 GUF1Q8N442 669 aaKnown RBP4.79□□□□□ -1.64
SDCBP-213ENST00000630925 ZNF781Q8N8C0 355 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 PTGR2Q8N8N7 351 aaPredicted RBP4.79□□□□□ -1.64
SDCBP-213ENST00000630925 C12orf50Q8NA57 414 aaPredicted RBP4.79□□□□□ -1.64
SDCBP-213ENST00000630925 ZNF680Q8NEM1 530 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 TMIEQ8NEW7 156 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 TTLQ8NG68 377 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 ZNF596Q8TC21 504 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 RNF141Q8WVD5 230 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 CPA5Q8WXQ8 436 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 TRIB2Q92519 343 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 RNFT2Q96EX2 444 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 ELMOD3Q96FG2 381 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 ZNF583Q96ND8 569 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 CD180Q99467 661 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 GPA33Q99795 319 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.79□□□□□ -1.64
SDCBP-213ENST00000630925 KLF16Q9BXK1 252 aaPredicted RBP4.79□□□□□ -1.64
SDCBP-213ENST00000630925 HDHD2Q9H0R4 259 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 MTIF3Q9H2K0 278 aaKnown RBP4.79□□□□□ -1.64
SDCBP-213ENST00000630925 AUNIPQ9H7T9 357 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 GLOD4Q9HC38 313 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 ZNF275Q9NSD4 429 aaPredicted RBP4.79□□□□□ -1.64
SDCBP-213ENST00000630925 SETD4Q9NVD3 440 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 PDP1Q9P0J1 537 aaPredicted RBP4.79□□□□□ -1.64
SDCBP-213ENST00000630925 SEMA5BQ9P283 1151 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 HEY2Q9UBP5 337 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 HESX1Q9UBX0 185 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 ACSL6Q9UKU0 697 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 PALD1Q9ULE6 856 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 DRG1Q9Y295 367 aaKnown RBP4.79□□□□□ -1.64
SDCBP-213ENST00000630925 TNRC18O15417 2968 aaPredicted RBP4.79□□□□□ -1.64
SDCBP-213ENST00000630925 A0A0A6YYJ9 748 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 A0A0J9YYE9 177 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 WDR91A4D1P6 747 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 WTIPA6NIX2 430 aaPredicted RBP4.79□□□□□ -1.64
SDCBP-213ENST00000630925 SDR42E2A6NKP2 422 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 BECN2A8MW95 431 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 SLCO1B7G3V0H7 640 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 PDLIM1O00151 329 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 INPPL1O15357 1258 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 AKAP8O43823 692 aaKnown RBP4.79□□□□□ -1.64
SDCBP-213ENST00000630925 VPS4BO75351 444 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 CSDE1O75534 798 aaKnown RBP4.79□□□□□ -1.64
SDCBP-213ENST00000630925 TRBC1P01850 177 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 OR52Z1P0C646 297 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 EZRP15311 586 aaKnown RBP4.79□□□□□ -1.64
SDCBP-213ENST00000630925 ELNP15502 786 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 CTPS1P17812 591 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 EIF2AK2P19525 551 aaKnown RBP4.79□□□□□ -1.64
SDCBP-213ENST00000630925 TIA1P31483 386 aaKnown RBP eCLIP4.79□□□□□ -1.649e-7■■■■□ 24
SDCBP-213ENST00000630925 SPAM1P38567 509 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 NDUFV1P49821 464 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 GSDMDP57764 484 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 TUBA4AP68366 448 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 PHEXP78562 749 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 PDE1BQ01064 536 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 TEKQ02763 1124 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 TAP1Q03518 808 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 GRIN1Q05586 938 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 CACNG1Q06432 222 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 DYRK1AQ13627 763 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 ARHGEF7Q14155 803 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 GPR176Q14439 515 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 PCOLCEQ15113 449 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 CHRNA2Q15822 529 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 TJAP1Q5JTD0 557 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 TMEM31Q5JXX7 168 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 PLA2G2CQ5R387 149 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 ZNF468Q5VIY5 522 aaPredicted RBP4.79□□□□□ -1.64
SDCBP-213ENST00000630925 TTC27Q6P3X3 843 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 LIPIQ6XZB0 460 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 GLDNQ6ZMI3 551 aaPredicted RBP4.79□□□□□ -1.64
SDCBP-213ENST00000630925 MISPQ8IVT2 679 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 MFN1Q8IWA4 741 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 MAP7D3Q8IWC1 876 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 ST13P4Q8IZP2 240 aaPredicted RBP4.79□□□□□ -1.64
SDCBP-213ENST00000630925 NLGN4XQ8N0W4 816 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 Q8N1Y9 231 aa4.79□□□□□ -1.64
SDCBP-213ENST00000630925 ZBTB2Q8N680 514 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms