RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 CCDC63Q8NA47 563 aa17.49■□□□□ 0.39
PTCHD3-202ENST00000622555 ARMC2Q8NEN0 867 aa17.49■□□□□ 0.39
PTCHD3-202ENST00000622555 OR2L2Q8NH16 312 aa17.49■□□□□ 0.39
PTCHD3-202ENST00000622555 HM13Q8TCT9 377 aa17.49■□□□□ 0.39
PTCHD3-202ENST00000622555 DENND1AQ8TEH3 1009 aa17.49■□□□□ 0.39
PTCHD3-202ENST00000622555 DNASE2BQ8WZ79 361 aa17.49■□□□□ 0.39
PTCHD3-202ENST00000622555 OR1E3Q8WZA6 343 aa17.49■□□□□ 0.39
PTCHD3-202ENST00000622555 PDXPQ96GD0 296 aa17.49■□□□□ 0.39
PTCHD3-202ENST00000622555 SCARF2Q96GP6 870 aaPredicted RBP17.49■□□□□ 0.39
PTCHD3-202ENST00000622555 PAIP2Q9BPZ3 127 aaKnown RBP17.49■□□□□ 0.39
PTCHD3-202ENST00000622555 CARS2Q9HA77 564 aaKnown RBP17.49■□□□□ 0.39
PTCHD3-202ENST00000622555 TM9SF3Q9HD45 589 aa17.49■□□□□ 0.39
PTCHD3-202ENST00000622555 GPSM3Q9Y4H4 160 aa17.49■□□□□ 0.39
PTCHD3-202ENST00000622555 DNMT3AQ9Y6K1 912 aaPredicted RBP17.49■□□□□ 0.39
PTCHD3-202ENST00000622555 C17orf113A0A1B0GUU1 675 aa17.48■□□□□ 0.39
PTCHD3-202ENST00000622555 TNFRSF10CO14798 259 aa17.48■□□□□ 0.39
PTCHD3-202ENST00000622555 HRO43593 1189 aa17.48■□□□□ 0.39
PTCHD3-202ENST00000622555 PROCP04070 461 aa17.48■□□□□ 0.39
PTCHD3-202ENST00000622555 ENO3P13929 434 aaPredicted RBP17.48■□□□□ 0.39
PTCHD3-202ENST00000622555 LSP1P33241 339 aa17.48■□□□□ 0.39
PTCHD3-202ENST00000622555 PREPP48147 710 aa17.48■□□□□ 0.39
PTCHD3-202ENST00000622555 DHPSP49366 369 aaPredicted RBP17.48■□□□□ 0.39
PTCHD3-202ENST00000622555 ATP6V0D1P61421 351 aa17.48■□□□□ 0.39
PTCHD3-202ENST00000622555 GBX1Q14549 363 aa17.48■□□□□ 0.39
PTCHD3-202ENST00000622555 ACAP2Q15057 778 aa17.48■□□□□ 0.39
PTCHD3-202ENST00000622555 CCDC153Q494R4 210 aa17.48■□□□□ 0.39
PTCHD3-202ENST00000622555 ZNF658BQ4V348 819 aaPredicted RBP17.48■□□□□ 0.39
PTCHD3-202ENST00000622555 PYCR3Q53H96 274 aa17.48■□□□□ 0.39
PTCHD3-202ENST00000622555 HHATQ5VTY9 493 aa17.48■□□□□ 0.39
PTCHD3-202ENST00000622555 CHST15Q7LFX5 561 aaPredicted RBP17.48■□□□□ 0.39
PTCHD3-202ENST00000622555 RD3Q7Z3Z2 195 aa17.48■□□□□ 0.39
PTCHD3-202ENST00000622555 VRK3Q8IV63 474 aa17.48■□□□□ 0.39
PTCHD3-202ENST00000622555 FSTL5Q8N475 847 aaPredicted RBP17.48■□□□□ 0.39
PTCHD3-202ENST00000622555 OXR1Q8N573 874 aa17.48■□□□□ 0.39
PTCHD3-202ENST00000622555 MFSD2AQ8NA29 543 aa17.48■□□□□ 0.39
PTCHD3-202ENST00000622555 SKA2Q8WVK7 121 aaPredicted RBP17.48■□□□□ 0.39
PTCHD3-202ENST00000622555 TSACCQ96A04 125 aaPredicted RBP17.48■□□□□ 0.39
PTCHD3-202ENST00000622555 PDLIM5Q96HC4 596 aaKnown RBP17.48■□□□□ 0.39
PTCHD3-202ENST00000622555 ALG9Q9H6U8 611 aa17.48■□□□□ 0.39
PTCHD3-202ENST00000622555 COG4Q9H9E3 785 aa17.48■□□□□ 0.39
PTCHD3-202ENST00000622555 INTS9Q9NV88 658 aaKnown RBP17.48■□□□□ 0.39
PTCHD3-202ENST00000622555 GULP1Q9UBP9 304 aa17.48■□□□□ 0.39
PTCHD3-202ENST00000622555 SLC23A2Q9UGH3 650 aa17.48■□□□□ 0.39
PTCHD3-202ENST00000622555 DNAJC16Q9Y2G8 782 aa17.48■□□□□ 0.39
PTCHD3-202ENST00000622555 TNRC6BQ9UPQ9 1833 aaKnown RBP17.47■□□□□ 0.39
PTCHD3-202ENST00000622555 TP53BP1Q12888 1972 aaPredicted RBP17.47■□□□□ 0.39
PTCHD3-202ENST00000622555 A0A1W2PR77 199 aa17.47■□□□□ 0.39
PTCHD3-202ENST00000622555 SLC5A10A0PJK1 596 aa17.47■□□□□ 0.39
PTCHD3-202ENST00000622555 NPEPPSL1A6NEC2 478 aa17.47■□□□□ 0.39
PTCHD3-202ENST00000622555 EIF3FO00303 357 aaPredicted RBP17.47■□□□□ 0.39
PTCHD3-202ENST00000622555 BTN3A1O00481 513 aa17.47■□□□□ 0.39
PTCHD3-202ENST00000622555 LIN7AO14910 233 aaPredicted RBP17.47■□□□□ 0.39
PTCHD3-202ENST00000622555 SCAMP1O15126 338 aa17.47■□□□□ 0.39
PTCHD3-202ENST00000622555 GPC4O75487 556 aa17.47■□□□□ 0.39
PTCHD3-202ENST00000622555 WNT1P04628 370 aa17.47■□□□□ 0.39
PTCHD3-202ENST00000622555 SP9P0CG40 484 aa17.47■□□□□ 0.39
PTCHD3-202ENST00000622555 ACP5P13686 325 aa17.47■□□□□ 0.39
PTCHD3-202ENST00000622555 SRP54P61011 504 aaKnown RBP17.47■□□□□ 0.39
PTCHD3-202ENST00000622555 GUCY1A3Q02108 690 aa17.47■□□□□ 0.39
PTCHD3-202ENST00000622555 NFE2L1Q14494 772 aa17.47■□□□□ 0.39
PTCHD3-202ENST00000622555 ANGPT1Q15389 498 aa17.47■□□□□ 0.39
PTCHD3-202ENST00000622555 ZNF528Q3MIS6 628 aa17.47■□□□□ 0.39
PTCHD3-202ENST00000622555 LYSMD4Q5XG99 296 aa17.47■□□□□ 0.39
PTCHD3-202ENST00000622555 PMS2CLQ68D20 193 aa17.47■□□□□ 0.39
PTCHD3-202ENST00000622555 LAYNQ6UX15 382 aa17.47■□□□□ 0.39
PTCHD3-202ENST00000622555 CEP68Q76N32 757 aa17.47■□□□□ 0.39
PTCHD3-202ENST00000622555 NELL1Q92832 810 aa17.47■□□□□ 0.39
PTCHD3-202ENST00000622555 GLMNQ92990 594 aa17.47■□□□□ 0.39
PTCHD3-202ENST00000622555 PTERQ96BW5 349 aa17.47■□□□□ 0.39
PTCHD3-202ENST00000622555 OR2M4Q96R27 311 aa17.47■□□□□ 0.39
PTCHD3-202ENST00000622555 MRPL57Q9BQC6 102 aaKnown RBP17.47■□□□□ 0.39
PTCHD3-202ENST00000622555 GPR27Q9NS67 375 aa17.47■□□□□ 0.39
PTCHD3-202ENST00000622555 ZSCAN32Q9NX65 697 aa17.47■□□□□ 0.39
PTCHD3-202ENST00000622555 CPSF2Q9P2I0 782 aaKnown RBP17.47■□□□□ 0.39
PTCHD3-202ENST00000622555 XPR1Q9UBH6 696 aa17.47■□□□□ 0.39
PTCHD3-202ENST00000622555 CDYLQ9Y232 598 aa17.47■□□□□ 0.39
PTCHD3-202ENST00000622555 KNL1Q8NG31 2342 aa17.47■□□□□ 0.39
PTCHD3-202ENST00000622555 TDRD6O60522 2096 aaKnown RBP17.47■□□□□ 0.39
PTCHD3-202ENST00000622555 SPTY2D1-AS1A0A0U1RR47 76 aa17.47■□□□□ 0.39
PTCHD3-202ENST00000622555 TK2O00142 265 aa17.47■□□□□ 0.39
PTCHD3-202ENST00000622555 CDC7O00311 574 aa17.47■□□□□ 0.39
PTCHD3-202ENST00000622555 SLCO2B1O94956 709 aa17.47■□□□□ 0.39
PTCHD3-202ENST00000622555 RBP1P09455 135 aa17.47■□□□□ 0.39
PTCHD3-202ENST00000622555 VCLP18206 1134 aa17.47■□□□□ 0.39
PTCHD3-202ENST00000622555 ITPKAP23677 461 aa17.47■□□□□ 0.39
PTCHD3-202ENST00000622555 ETV4P43268 484 aa17.47■□□□□ 0.39
PTCHD3-202ENST00000622555 WDR4P57081 412 aaKnown RBP17.47■□□□□ 0.39
PTCHD3-202ENST00000622555 ALG11Q2TAA5 492 aa17.47■□□□□ 0.39
PTCHD3-202ENST00000622555 PLK5Q496M5 336 aa17.47■□□□□ 0.39
PTCHD3-202ENST00000622555 TECRLQ5HYJ1 363 aa17.47■□□□□ 0.39
PTCHD3-202ENST00000622555 FAM83HQ6ZRV2 1179 aaPredicted RBP17.47■□□□□ 0.39
PTCHD3-202ENST00000622555 ISCA2Q86U28 154 aa17.47■□□□□ 0.39
PTCHD3-202ENST00000622555 IQCHQ86VS3 1027 aa17.47■□□□□ 0.39
PTCHD3-202ENST00000622555 DCP2Q8IU60 420 aaKnown RBP17.47■□□□□ 0.39
PTCHD3-202ENST00000622555 HID1Q8IV36 788 aa17.47■□□□□ 0.39
PTCHD3-202ENST00000622555 C1orf216Q8TAB5 229 aa17.47■□□□□ 0.39
PTCHD3-202ENST00000622555 TIMM29Q9BSF4 260 aa17.47■□□□□ 0.39
PTCHD3-202ENST00000622555 MRPL46Q9H2W6 279 aaKnown RBP17.47■□□□□ 0.39
PTCHD3-202ENST00000622555 TFB2MQ9H5Q4 396 aaKnown RBP17.47■□□□□ 0.39
PTCHD3-202ENST00000622555 C11orf16Q9NQ32 467 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms