RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 A0A1B0GTW7 788 aa9.28□□□□□ -0.92
PDPN-212ENST00000621990 SMAD6O43541 496 aaKnown RBP9.28□□□□□ -0.92
PDPN-212ENST00000621990 PQBP1O60828 265 aaKnown RBP9.28□□□□□ -0.92
PDPN-212ENST00000621990 G6PDP11413 515 aa9.28□□□□□ -0.92
PDPN-212ENST00000621990 ITGALP20701 1170 aa9.28□□□□□ -0.92
PDPN-212ENST00000621990 DGKAP23743 735 aa9.28□□□□□ -0.92
PDPN-212ENST00000621990 RGS4P49798 205 aa9.28□□□□□ -0.92
PDPN-212ENST00000621990 PTPN5P54829 565 aa9.28□□□□□ -0.92
PDPN-212ENST00000621990 PRMT2P55345 433 aa9.28□□□□□ -0.92
PDPN-212ENST00000621990 BCL2L1Q07817 233 aa9.28□□□□□ -0.92
PDPN-212ENST00000621990 ABRAXAS2Q15018 415 aa9.28□□□□□ -0.92
PDPN-212ENST00000621990 CYP51A1Q16850 503 aa9.28□□□□□ -0.92
PDPN-212ENST00000621990 SLC36A3Q495N2 470 aa9.28□□□□□ -0.92
PDPN-212ENST00000621990 SLC2A7Q6PXP3 512 aa9.28□□□□□ -0.92
PDPN-212ENST00000621990 CYP20A1Q6UW02 462 aa9.28□□□□□ -0.92
PDPN-212ENST00000621990 IL27RAQ6UWB1 636 aa9.28□□□□□ -0.92
PDPN-212ENST00000621990 ISLR2Q6UXK2 745 aa9.28□□□□□ -0.92
PDPN-212ENST00000621990 TBC1D21Q8IYX1 336 aa9.28□□□□□ -0.92
PDPN-212ENST00000621990 FIBCD1Q8N539 461 aa9.28□□□□□ -0.92
PDPN-212ENST00000621990 DCBLD1Q8N8Z6 715 aa9.28□□□□□ -0.92
PDPN-212ENST00000621990 ZNF689Q96CS4 500 aaPredicted RBP9.28□□□□□ -0.92
PDPN-212ENST00000621990 VWCEQ96DN2 955 aa9.28□□□□□ -0.92
PDPN-212ENST00000621990 FAM126AQ9BYI3 521 aaPredicted RBP9.28□□□□□ -0.92
PDPN-212ENST00000621990 ASB8Q9H765 288 aa9.28□□□□□ -0.92
PDPN-212ENST00000621990 RPF2Q9H7B2 306 aaKnown RBP9.28□□□□□ -0.92
PDPN-212ENST00000621990 IPPKQ9H8X2 491 aa9.28□□□□□ -0.92
PDPN-212ENST00000621990 SMOXQ9NWM0 555 aa9.28□□□□□ -0.92
PDPN-212ENST00000621990 ASIC5Q9NY37 505 aa9.28□□□□□ -0.92
PDPN-212ENST00000621990 KLHL42Q9P2K6 505 aa9.28□□□□□ -0.92
PDPN-212ENST00000621990 CPQQ9Y646 472 aa9.28□□□□□ -0.92
PDPN-212ENST00000621990 PRSS21Q9Y6M0 314 aa9.28□□□□□ -0.92
PDPN-212ENST00000621990 C1orf232A0A0U1RR37 186 aa9.27□□□□□ -0.92
PDPN-212ENST00000621990 PLOD2O00469 737 aa9.27□□□□□ -0.92
PDPN-212ENST00000621990 PRRG1O14668 218 aa9.27□□□□□ -0.92
PDPN-212ENST00000621990 INPP4BO15327 924 aa9.27□□□□□ -0.92
PDPN-212ENST00000621990 MTHFD1P11586 935 aaKnown RBP9.27□□□□□ -0.92
PDPN-212ENST00000621990 BPIP17213 487 aa9.27□□□□□ -0.92
PDPN-212ENST00000621990 UGT1A6P19224 532 aa9.27□□□□□ -0.92
PDPN-212ENST00000621990 HNF1BP35680 557 aa9.27□□□□□ -0.92
PDPN-212ENST00000621990 CCL23P55773 120 aa9.27□□□□□ -0.92
PDPN-212ENST00000621990 SULT1C3Q6IMI6 304 aa9.27□□□□□ -0.92
PDPN-212ENST00000621990 B3GNT6Q6ZMB0 384 aa9.27□□□□□ -0.92
PDPN-212ENST00000621990 HTR3DQ70Z44 454 aa9.27□□□□□ -0.92
PDPN-212ENST00000621990 TRIM46Q7Z4K8 759 aa9.27□□□□□ -0.92
PDPN-212ENST00000621990 ARL14EPQ8N8R7 260 aaPredicted RBP9.27□□□□□ -0.92
PDPN-212ENST00000621990 OR8J3Q8NGG0 315 aa9.27□□□□□ -0.92
PDPN-212ENST00000621990 RHBDF1Q96CC6 855 aa9.27□□□□□ -0.92
PDPN-212ENST00000621990 RMND5BQ96G75 393 aaPredicted RBP9.27□□□□□ -0.92
PDPN-212ENST00000621990 PPP3R2Q96LZ3 170 aa9.27□□□□□ -0.92
PDPN-212ENST00000621990 TMEM74Q96NL1 305 aa9.27□□□□□ -0.92
PDPN-212ENST00000621990 CCDC115Q96NT0 180 aa9.27□□□□□ -0.92
PDPN-212ENST00000621990 TM6SF2Q9BZW4 377 aa9.27□□□□□ -0.92
PDPN-212ENST00000621990 CD244Q9BZW8 370 aa9.27□□□□□ -0.92
PDPN-212ENST00000621990 CLK4Q9HAZ1 481 aaKnown RBP9.27□□□□□ -0.92
PDPN-212ENST00000621990 CD320Q9NPF0 282 aa9.27□□□□□ -0.92
PDPN-212ENST00000621990 TUBA8Q9NY65 449 aaPredicted RBP9.27□□□□□ -0.92
PDPN-212ENST00000621990 MAGEL2Q9UJ55 1249 aa9.27□□□□□ -0.92
PDPN-212ENST00000621990 ANAPC2Q9UJX6 822 aa9.27□□□□□ -0.92
PDPN-212ENST00000621990 OAZ3Q9UMX2 235 aa9.27□□□□□ -0.92
PDPN-212ENST00000621990 SLC8A2Q9UPR5 921 aa9.27□□□□□ -0.92
PDPN-212ENST00000621990 CEPT1Q9Y6K0 416 aa9.27□□□□□ -0.92
PDPN-212ENST00000621990 GLYATL1P3A0A0U1RQE8 302 aa9.27□□□□□ -0.93
PDPN-212ENST00000621990 SAC3D1A6NKF1 404 aa9.27□□□□□ -0.93
PDPN-212ENST00000621990 WDR47O94967 919 aa9.27□□□□□ -0.93
PDPN-212ENST00000621990 SLC25A14O95258 325 aaPredicted RBP9.27□□□□□ -0.93
PDPN-212ENST00000621990 BMP10O95393 424 aa9.27□□□□□ -0.93
PDPN-212ENST00000621990 BMP1P13497 986 aa9.27□□□□□ -0.93
PDPN-212ENST00000621990 CDH2P19022 906 aaPredicted RBP9.27□□□□□ -0.93
PDPN-212ENST00000621990 MERTKQ12866 999 aa9.27□□□□□ -0.93
PDPN-212ENST00000621990 PHKG1Q16816 387 aa9.27□□□□□ -0.93
PDPN-212ENST00000621990 AP5B1Q2VPB7 878 aa9.27□□□□□ -0.93
PDPN-212ENST00000621990 RFTN2Q52LD8 501 aaPredicted RBP9.27□□□□□ -0.93
PDPN-212ENST00000621990 CDKL4Q5MAI5 379 aa9.27□□□□□ -0.93
PDPN-212ENST00000621990 TXNDC8Q6A555 127 aa9.27□□□□□ -0.93
PDPN-212ENST00000621990 GRAMD4Q6IC98 578 aa9.27□□□□□ -0.93
PDPN-212ENST00000621990 KRT80Q6KB66 452 aa9.27□□□□□ -0.93
PDPN-212ENST00000621990 TPGS1Q6ZTW0 290 aa9.27□□□□□ -0.93
PDPN-212ENST00000621990 ITIH5Q86UX2 942 aa9.27□□□□□ -0.93
PDPN-212ENST00000621990 ZSWIM9Q86XI8 627 aa9.27□□□□□ -0.93
PDPN-212ENST00000621990 RIMKLAQ8IXN7 391 aa9.27□□□□□ -0.93
PDPN-212ENST00000621990 ZBTB2Q8N680 514 aa9.27□□□□□ -0.93
PDPN-212ENST00000621990 OR6K2Q8NGY2 324 aa9.27□□□□□ -0.93
PDPN-212ENST00000621990 BPIFB1Q8TDL5 484 aa9.27□□□□□ -0.93
PDPN-212ENST00000621990 ADAMTS16Q8TE57 1224 aa9.27□□□□□ -0.93
PDPN-212ENST00000621990 LMLNQ96KR4 655 aa9.27□□□□□ -0.93
PDPN-212ENST00000621990 C17orf80Q9BSJ5 609 aa9.27□□□□□ -0.93
PDPN-212ENST00000621990 ADI1Q9BV57 179 aa9.27□□□□□ -0.93
PDPN-212ENST00000621990 NTMT1Q9BV86 223 aa9.27□□□□□ -0.93
PDPN-212ENST00000621990 ATP13A3Q9H7F0 1226 aa9.27□□□□□ -0.93
PDPN-212ENST00000621990 PAK6Q9NQU5 681 aaPredicted RBP9.27□□□□□ -0.93
PDPN-212ENST00000621990 ABCB8Q9NUT2 735 aa9.27□□□□□ -0.93
PDPN-212ENST00000621990 TRPS1Q9UHF7 1281 aa9.27□□□□□ -0.93
PDPN-212ENST00000621990 EVLQ9UI08 416 aaPredicted RBP9.27□□□□□ -0.93
PDPN-212ENST00000621990 PPIL1Q9Y3C6 166 aa9.27□□□□□ -0.93
PDPN-212ENST00000621990 FAM149AA5PLN7 773 aa9.26□□□□□ -0.93
PDPN-212ENST00000621990 PDLIM1O00151 329 aa9.26□□□□□ -0.93
PDPN-212ENST00000621990 SCAMP3O14828 347 aaKnown RBP9.26□□□□□ -0.93
PDPN-212ENST00000621990 ARHGEF15O94989 841 aa9.26□□□□□ -0.93
PDPN-212ENST00000621990 PRSS23O95084 383 aa9.26□□□□□ -0.93
PDPN-212ENST00000621990 CLDN7O95471 211 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms