RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 POLR3HQ9Y535 204 aaPredicted RBP19.29■□□□□ 0.68
PDLIM3-212ENST00000620787 SPO11Q9Y5K1 396 aa19.29■□□□□ 0.68
PDLIM3-212ENST00000620787 LOC100130705A0A1B0GUX0 176 aa19.29■□□□□ 0.68
PDLIM3-212ENST00000620787 ZNF99A8MXY4 864 aaPredicted RBP19.29■□□□□ 0.68
PDLIM3-212ENST00000620787 IFRD1O00458 451 aaPredicted RBP19.29■□□□□ 0.68
PDLIM3-212ENST00000620787 GABARAPO95166 117 aa19.29■□□□□ 0.68
PDLIM3-212ENST00000620787 TSPY1Q01534 308 aa19.29■□□□□ 0.68
PDLIM3-212ENST00000620787 KIAA0040Q15053 153 aa19.29■□□□□ 0.68
PDLIM3-212ENST00000620787 PTPRNQ16849 979 aa19.29■□□□□ 0.68
PDLIM3-212ENST00000620787 FBXL22Q6P050 247 aa19.29■□□□□ 0.68
PDLIM3-212ENST00000620787 TMEM179BQ7Z7N9 219 aa19.29■□□□□ 0.68
PDLIM3-212ENST00000620787 SNX29P2Q8IUI4 249 aa19.29■□□□□ 0.68
PDLIM3-212ENST00000620787 SIDT2Q8NBJ9 832 aaKnown RBP19.29■□□□□ 0.68
PDLIM3-212ENST00000620787 PIK3C3Q8NEB9 887 aa19.29■□□□□ 0.68
PDLIM3-212ENST00000620787 FAR1Q8WVX9 515 aa19.29■□□□□ 0.68
PDLIM3-212ENST00000620787 HBEGFQ99075 208 aa19.29■□□□□ 0.68
PDLIM3-212ENST00000620787 ACTR8Q9H981 624 aa19.29■□□□□ 0.68
PDLIM3-212ENST00000620787 EXD2Q9NVH0 621 aa19.29■□□□□ 0.68
PDLIM3-212ENST00000620787 CD274Q9NZQ7 290 aa19.29■□□□□ 0.68
PDLIM3-212ENST00000620787 ZNF232Q9UNY5 417 aa19.29■□□□□ 0.68
PDLIM3-212ENST00000620787 PTGES3LE9PB15 166 aa19.28■□□□□ 0.68
PDLIM3-212ENST00000620787 LSM1O15116 133 aaKnown RBP19.28■□□□□ 0.68
PDLIM3-212ENST00000620787 GSTA4O15217 222 aa19.28■□□□□ 0.68
PDLIM3-212ENST00000620787 RAMP2O60895 175 aa19.28■□□□□ 0.68
PDLIM3-212ENST00000620787 NDUFS3O75489 264 aa19.28■□□□□ 0.68
PDLIM3-212ENST00000620787 CDKN1CP49918 316 aaPredicted RBP19.28■□□□□ 0.68
PDLIM3-212ENST00000620787 BEX3Q00994 111 aa19.28■□□□□ 0.68
PDLIM3-212ENST00000620787 C1QTNF12Q5T7M4 302 aa19.28■□□□□ 0.68
PDLIM3-212ENST00000620787 AFTPHQ6ULP2 937 aa19.28■□□□□ 0.68
PDLIM3-212ENST00000620787 GPSM1Q86YR5 675 aa19.28■□□□□ 0.68
PDLIM3-212ENST00000620787 MFSD4AQ8N468 514 aa19.28■□□□□ 0.68
PDLIM3-212ENST00000620787 S100ZQ8WXG8 99 aa19.28■□□□□ 0.68
PDLIM3-212ENST00000620787 IKZF5Q9H5V7 419 aa19.28■□□□□ 0.68
PDLIM3-212ENST00000620787 ATP13A3Q9H7F0 1226 aa19.28■□□□□ 0.68
PDLIM3-212ENST00000620787 KIAA1522Q9P206 1035 aaPredicted RBP19.28■□□□□ 0.68
PDLIM3-212ENST00000620787 ITGB1BP2Q9UKP3 347 aa19.28■□□□□ 0.68
PDLIM3-212ENST00000620787 TRPM7Q96QT4 1865 aa19.28■□□□□ 0.68
PDLIM3-212ENST00000620787 KATNA1O75449 491 aa19.28■□□□□ 0.68
PDLIM3-212ENST00000620787 POMCP01189 267 aa19.28■□□□□ 0.68
PDLIM3-212ENST00000620787 CAPN1P07384 714 aa19.28■□□□□ 0.68
PDLIM3-212ENST00000620787 HOXC8P31273 242 aa19.28■□□□□ 0.68
PDLIM3-212ENST00000620787 MRPS6P82932 125 aaKnown RBP19.28■□□□□ 0.68
PDLIM3-212ENST00000620787 PPP1R8Q12972 351 aaKnown RBP19.28■□□□□ 0.68
PDLIM3-212ENST00000620787 ZNF235Q14590 738 aa19.28■□□□□ 0.68
PDLIM3-212ENST00000620787 RAP1GAP2Q684P5 730 aa19.28■□□□□ 0.68
PDLIM3-212ENST00000620787 IL27RAQ6UWB1 636 aa19.28■□□□□ 0.68
PDLIM3-212ENST00000620787 LINC00299Q6ZSB3 139 aa19.28■□□□□ 0.68
PDLIM3-212ENST00000620787 SCN4BQ8IWT1 228 aa19.28■□□□□ 0.68
PDLIM3-212ENST00000620787 ABI1Q8IZP0 508 aa19.28■□□□□ 0.68
PDLIM3-212ENST00000620787 MINDY2Q8NBR6 621 aa19.28■□□□□ 0.68
PDLIM3-212ENST00000620787 FRS2Q8WU20 508 aa19.28■□□□□ 0.68
PDLIM3-212ENST00000620787 EEF1AKMT1Q8WVE0 214 aa19.28■□□□□ 0.68
PDLIM3-212ENST00000620787 HS6ST1O60243 411 aa19.27■□□□□ 0.68
PDLIM3-212ENST00000620787 NIPSNAP2O75323 286 aa19.27■□□□□ 0.68
PDLIM3-212ENST00000620787 NDST3O95803 873 aa19.27■□□□□ 0.68
PDLIM3-212ENST00000620787 TGM1P22735 817 aa19.27■□□□□ 0.68
PDLIM3-212ENST00000620787 EMX1Q04741 257 aaPredicted RBP19.27■□□□□ 0.68
PDLIM3-212ENST00000620787 SDHAF4Q5VUM1 108 aa19.27■□□□□ 0.68
PDLIM3-212ENST00000620787 TMEM53Q6P2H8 277 aa19.27■□□□□ 0.68
PDLIM3-212ENST00000620787 OR4K2Q8NGD2 314 aa19.27■□□□□ 0.68
PDLIM3-212ENST00000620787 OR10A6Q8NH74 314 aa19.27■□□□□ 0.68
PDLIM3-212ENST00000620787 FBLIM1Q8WUP2 373 aa19.27■□□□□ 0.68
PDLIM3-212ENST00000620787 RHBDF1Q96CC6 855 aa19.27■□□□□ 0.68
PDLIM3-212ENST00000620787 ERLEC1Q96DZ1 483 aa19.27■□□□□ 0.68
PDLIM3-212ENST00000620787 LINGO1Q96FE5 620 aa19.27■□□□□ 0.68
PDLIM3-212ENST00000620787 PCDHGB1Q9Y5G3 927 aa19.27■□□□□ 0.68
PDLIM3-212ENST00000620787 GNGT2O14610 69 aa19.27■□□□□ 0.67
PDLIM3-212ENST00000620787 MAN1A2O60476 641 aa19.27■□□□□ 0.67
PDLIM3-212ENST00000620787 PRAMEF11O60813 436 aa19.27■□□□□ 0.67
PDLIM3-212ENST00000620787 ITGB1P05556 798 aa19.27■□□□□ 0.67
PDLIM3-212ENST00000620787 OR4Q2P0C623 313 aa19.27■□□□□ 0.67
PDLIM3-212ENST00000620787 PRKACGP22612 351 aa19.27■□□□□ 0.67
PDLIM3-212ENST00000620787 DCTP40126 519 aa19.27■□□□□ 0.67
PDLIM3-212ENST00000620787 CYP4F3Q08477 520 aa19.27■□□□□ 0.67
PDLIM3-212ENST00000620787 NR6A1Q15406 480 aa19.27■□□□□ 0.67
PDLIM3-212ENST00000620787 ADPRMQ3LIE5 342 aa19.27■□□□□ 0.67
PDLIM3-212ENST00000620787 PARP15Q460N3 678 aa19.27■□□□□ 0.67
PDLIM3-212ENST00000620787 THEM5Q8N1Q8 247 aa19.27■□□□□ 0.67
PDLIM3-212ENST00000620787 NDNFQ8TB73 568 aa19.27■□□□□ 0.67
PDLIM3-212ENST00000620787 METTL6Q8TCB7 284 aa19.27■□□□□ 0.67
PDLIM3-212ENST00000620787 ZNF566Q969W8 418 aa19.27■□□□□ 0.67
PDLIM3-212ENST00000620787 BCL7BQ9BQE9 202 aa19.27■□□□□ 0.67
PDLIM3-212ENST00000620787 CCDC90BQ9GZT6 254 aa19.27■□□□□ 0.67
PDLIM3-212ENST00000620787 TMEFF2Q9UIK5 374 aaPredicted RBP19.27■□□□□ 0.67
PDLIM3-212ENST00000620787 C3orf18Q9UK00 162 aa19.27■□□□□ 0.67
PDLIM3-212ENST00000620787 GREB1Q4ZG55 1949 aa19.26■□□□□ 0.67
PDLIM3-212ENST00000620787 CHD5Q8TDI0 1954 aa19.26■□□□□ 0.67
PDLIM3-212ENST00000620787 VPS26AO75436 327 aa19.26■□□□□ 0.67
PDLIM3-212ENST00000620787 PRKD3O94806 890 aa19.26■□□□□ 0.67
PDLIM3-212ENST00000620787 CCDC159P0C7I6 412 aa19.26■□□□□ 0.67
PDLIM3-212ENST00000620787 KPNA1P52294 538 aaPredicted RBP19.26■□□□□ 0.67
PDLIM3-212ENST00000620787 RFTN2Q52LD8 501 aaPredicted RBP19.26■□□□□ 0.67
PDLIM3-212ENST00000620787 AGAP7PQ5VUJ5 663 aa19.26■□□□□ 0.67
PDLIM3-212ENST00000620787 MON1AQ86VX9 555 aa19.26■□□□□ 0.67
PDLIM3-212ENST00000620787 OR7A2PQ8NGA2 310 aa19.26■□□□□ 0.67
PDLIM3-212ENST00000620787 OR5K1Q8NHB7 308 aa19.26■□□□□ 0.67
PDLIM3-212ENST00000620787 CNIH3Q8TBE1 160 aa19.26■□□□□ 0.67
PDLIM3-212ENST00000620787 CD200R1Q8TD46 325 aa19.26■□□□□ 0.67
PDLIM3-212ENST00000620787 NSMCE3Q96MG7 304 aa19.26■□□□□ 0.67
PDLIM3-212ENST00000620787 TRMT6Q9UJA5 497 aaKnown RBP19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms