RNA–Protein interactions for RNA: ENST00000620219.4

CPSF1-213, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF1, Length 4,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-213ENST00000620219 ASB2Q96Q27 587 aa15.47■□□□□ 0.07
CPSF1-213ENST00000620219 LMAN2LQ9H0V9 348 aa15.47■□□□□ 0.07
CPSF1-213ENST00000620219 HEBP1Q9NRV9 189 aa15.47■□□□□ 0.07
CPSF1-213ENST00000620219 RGSL1A5PLK6 1076 aa15.47■□□□□ 0.07
CPSF1-213ENST00000620219 GSTA4O15217 222 aa15.47■□□□□ 0.07
CPSF1-213ENST00000620219 AKAP10O43572 662 aa15.47■□□□□ 0.07
CPSF1-213ENST00000620219 MYO1DO94832 1006 aa15.47■□□□□ 0.07
CPSF1-213ENST00000620219 CCND1P24385 295 aa15.47■□□□□ 0.07
CPSF1-213ENST00000620219 KHDC1Q4VXA5 237 aaKnown RBP15.47■□□□□ 0.07
CPSF1-213ENST00000620219 XKR6Q5GH73 641 aa15.47■□□□□ 0.07
CPSF1-213ENST00000620219 COL13A1Q5TAT6 717 aaPredicted RBP15.47■□□□□ 0.07
CPSF1-213ENST00000620219 ANKRD54Q6NXT1 300 aa15.47■□□□□ 0.07
CPSF1-213ENST00000620219 FGF14Q92915 247 aa15.47■□□□□ 0.07
CPSF1-213ENST00000620219 NCLNQ969V3 563 aa15.47■□□□□ 0.07
CPSF1-213ENST00000620219 IGLON5A6NGN9 336 aa15.47■□□□□ 0.07
CPSF1-213ENST00000620219 NPHS1O60500 1241 aa15.47■□□□□ 0.07
CPSF1-213ENST00000620219 KLF8O95600 359 aaPredicted RBP15.47■□□□□ 0.07
CPSF1-213ENST00000620219 OTCP00480 354 aa15.47■□□□□ 0.07
CPSF1-213ENST00000620219 TMEM215Q68D42 235 aa15.47■□□□□ 0.07
CPSF1-213ENST00000620219 C16orf89Q6UX73 402 aa15.47■□□□□ 0.07
CPSF1-213ENST00000620219 RTL10Q7L3V2 364 aa15.47■□□□□ 0.07
CPSF1-213ENST00000620219 UTP4Q969X6 686 aaKnown RBP15.47■□□□□ 0.07
CPSF1-213ENST00000620219 RSPRY1Q96DX4 576 aa15.47■□□□□ 0.07
CPSF1-213ENST00000620219 PARVBQ9HBI1 364 aa15.47■□□□□ 0.07
CPSF1-213ENST00000620219 PIAS3Q9Y6X2 628 aa15.47■□□□□ 0.07
CPSF1-213ENST00000620219 KPNA5O15131 536 aa15.47■□□□□ 0.07
CPSF1-213ENST00000620219 C6P13671 934 aa15.47■□□□□ 0.07
CPSF1-213ENST00000620219 HNF4AP41235 474 aa15.47■□□□□ 0.07
CPSF1-213ENST00000620219 UBXN2BQ14CS0 331 aa15.47■□□□□ 0.07
CPSF1-213ENST00000620219 EIF4HQ15056 248 aaKnown RBP15.47■□□□□ 0.07
CPSF1-213ENST00000620219 TMEM31Q5JXX7 168 aa15.47■□□□□ 0.07
CPSF1-213ENST00000620219 ZNF678Q5SXM1 525 aa15.47■□□□□ 0.07
CPSF1-213ENST00000620219 TMEM207Q6UWW9 146 aa15.47■□□□□ 0.07
CPSF1-213ENST00000620219 MAVSQ7Z434 540 aa15.47■□□□□ 0.07
CPSF1-213ENST00000620219 CLEC14AQ86T13 490 aa15.47■□□□□ 0.07
CPSF1-213ENST00000620219 HPS6Q86YV9 775 aa15.47■□□□□ 0.07
CPSF1-213ENST00000620219 ULK2Q8IYT8 1036 aa15.47■□□□□ 0.07
CPSF1-213ENST00000620219 WDR60Q8WVS4 1066 aa15.47■□□□□ 0.07
CPSF1-213ENST00000620219 FZD3Q9NPG1 666 aa15.47■□□□□ 0.07
CPSF1-213ENST00000620219 STOML2Q9UJZ1 356 aa15.47■□□□□ 0.07
CPSF1-213ENST00000620219 AURKCQ9UQB9 309 aa15.47■□□□□ 0.07
CPSF1-213ENST00000620219 EIF3LQ9Y262 564 aaKnown RBP15.47■□□□□ 0.07
CPSF1-213ENST00000620219 DYRK1BQ9Y463 629 aa15.47■□□□□ 0.07
CPSF1-213ENST00000620219 GREB1Q4ZG55 1949 aa15.46■□□□□ 0.07
CPSF1-213ENST00000620219 MRASO14807 208 aa15.46■□□□□ 0.07
CPSF1-213ENST00000620219 MGRN1O60291 552 aa15.46■□□□□ 0.07
CPSF1-213ENST00000620219 CNTN1Q12860 1018 aa15.46■□□□□ 0.07
CPSF1-213ENST00000620219 PTK2BQ14289 1009 aa15.46■□□□□ 0.07
CPSF1-213ENST00000620219 FRMD7Q6ZUT3 714 aa15.46■□□□□ 0.07
CPSF1-213ENST00000620219 MIER2Q8N344 545 aa15.46■□□□□ 0.07
CPSF1-213ENST00000620219 OR9I1Q8NGQ6 314 aa15.46■□□□□ 0.07
CPSF1-213ENST00000620219 CD200R1Q8TD46 325 aa15.46■□□□□ 0.07
CPSF1-213ENST00000620219 ISG20Q96AZ6 181 aaKnown RBP15.46■□□□□ 0.07
CPSF1-213ENST00000620219 C1QTNF1Q9BXJ1 281 aa15.46■□□□□ 0.07
CPSF1-213ENST00000620219 C5orf42Q9H799 3197 aa15.46■□□□□ 0.07
CPSF1-213ENST00000620219 GNG14A0A1W2PPG7 69 aa15.46■□□□□ 0.07
CPSF1-213ENST00000620219 TPST1O60507 370 aa15.46■□□□□ 0.07
CPSF1-213ENST00000620219 SRPRAP08240 638 aaKnown RBP15.46■□□□□ 0.07
CPSF1-213ENST00000620219 LAMP2P13473 410 aa15.46■□□□□ 0.07
CPSF1-213ENST00000620219 GALK1P51570 392 aa15.46■□□□□ 0.07
CPSF1-213ENST00000620219 METAP1P53582 386 aa15.46■□□□□ 0.07
CPSF1-213ENST00000620219 PTSQ03393 145 aa15.46■□□□□ 0.07
CPSF1-213ENST00000620219 HYAL1Q12794 435 aa15.46■□□□□ 0.07
CPSF1-213ENST00000620219 PGS1Q32NB8 556 aa15.46■□□□□ 0.07
CPSF1-213ENST00000620219 ATG14Q6ZNE5 492 aa15.46■□□□□ 0.07
CPSF1-213ENST00000620219 FAM156AQ8NDB6 213 aa15.46■□□□□ 0.07
CPSF1-213ENST00000620219 DOLKQ9UPQ8 538 aa15.46■□□□□ 0.07
CPSF1-213ENST00000620219 KRT87PA6NCN2 255 aa15.46■□□□□ 0.06
CPSF1-213ENST00000620219 MESP2Q0VG99 397 aa15.46■□□□□ 0.06
CPSF1-213ENST00000620219 NFYCQ13952 458 aa15.46■□□□□ 0.06
CPSF1-213ENST00000620219 PLCL1Q15111 1095 aa15.46■□□□□ 0.06
CPSF1-213ENST00000620219 TMTC4Q5T4D3 741 aa15.46■□□□□ 0.06
CPSF1-213ENST00000620219 TRIM48Q8IWZ4 208 aa15.46■□□□□ 0.06
CPSF1-213ENST00000620219 RAB42Q8N4Z0 105 aa15.46■□□□□ 0.06
CPSF1-213ENST00000620219 GPR156Q8NFN8 814 aa15.46■□□□□ 0.06
CPSF1-213ENST00000620219 GLYATL1Q969I3 302 aa15.46■□□□□ 0.06
CPSF1-213ENST00000620219 MIR1-1HGQ9H1L0 117 aa15.46■□□□□ 0.06
CPSF1-213ENST00000620219 DNAJC28Q9NX36 388 aa15.46■□□□□ 0.06
CPSF1-213ENST00000620219 SARDHQ9UL12 918 aa15.46■□□□□ 0.06
CPSF1-213ENST00000620219 EPOPA6NHQ4 379 aa15.45■□□□□ 0.06
CPSF1-213ENST00000620219 MATN2O00339 956 aa15.45■□□□□ 0.06
CPSF1-213ENST00000620219 ADRB3P13945 408 aa15.45■□□□□ 0.06
CPSF1-213ENST00000620219 BNC2Q6ZN30 1099 aaPredicted RBP15.45■□□□□ 0.06
CPSF1-213ENST00000620219 RIPOR1Q6ZS17 1223 aa15.45■□□□□ 0.06
CPSF1-213ENST00000620219 MTSS1LQ765P7 747 aa15.45■□□□□ 0.06
CPSF1-213ENST00000620219 NUDT4Q9NZJ9 180 aa15.45■□□□□ 0.06
CPSF1-213ENST00000620219 SPASTQ9UBP0 616 aa15.45■□□□□ 0.06
CPSF1-213ENST00000620219 POP7O75817 140 aaKnown RBP15.45■□□□□ 0.06
CPSF1-213ENST00000620219 LRATO95237 230 aa15.45■□□□□ 0.06
CPSF1-213ENST00000620219 ACP5P13686 325 aa15.45■□□□□ 0.06
CPSF1-213ENST00000620219 CLNS1AP54105 237 aaKnown RBP15.45■□□□□ 0.06
CPSF1-213ENST00000620219 FLOT2Q14254 428 aa15.45■□□□□ 0.06
CPSF1-213ENST00000620219 FRG1Q14331 258 aaKnown RBP15.45■□□□□ 0.06
CPSF1-213ENST00000620219 CTSL3PQ5NE16 218 aa15.45■□□□□ 0.06
CPSF1-213ENST00000620219 CACHD1Q5VU97 1274 aa15.45■□□□□ 0.06
CPSF1-213ENST00000620219 LKAAEAR1Q8TD35 194 aa15.45■□□□□ 0.06
CPSF1-213ENST00000620219 NKX1-2Q9UD57 310 aaPredicted RBP15.45■□□□□ 0.06
CPSF1-213ENST00000620219 WASF2Q9Y6W5 498 aa15.45■□□□□ 0.06
CPSF1-213ENST00000620219 LATO43561 262 aa15.45■□□□□ 0.06
CPSF1-213ENST00000620219 UNC50Q53HI1 259 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms