RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 KCNMB2Q9Y691 235 aa11.65□□□□□ -0.55
UPF3B-204ENST00000619445 DOPEY2Q9Y3R5 2298 aa11.65□□□□□ -0.55
UPF3B-204ENST00000619445 BSNQ9UPA5 3926 aa11.64□□□□□ -0.55
UPF3B-204ENST00000619445 IGHV5-51A0A0C4DH38 117 aa11.64□□□□□ -0.55
UPF3B-204ENST00000619445 C17orf113A0A1B0GUU1 675 aa11.64□□□□□ -0.55
UPF3B-204ENST00000619445 MACROD2A1Z1Q3 448 aa11.64□□□□□ -0.55
UPF3B-204ENST00000619445 GOLGA6L9A6NEM1 432 aa11.64□□□□□ -0.55
UPF3B-204ENST00000619445 AGAP14A8MT82 685 aa11.64□□□□□ -0.55
UPF3B-204ENST00000619445 GAPDHSO14556 408 aaPredicted RBP11.64□□□□□ -0.55
UPF3B-204ENST00000619445 KIF1CO43896 1103 aaKnown RBP11.64□□□□□ -0.55
UPF3B-204ENST00000619445 CPNE3O75131 537 aaKnown RBP11.64□□□□□ -0.55
UPF3B-204ENST00000619445 KATNA1O75449 491 aa11.64□□□□□ -0.55
UPF3B-204ENST00000619445 CREG1O75629 220 aa11.64□□□□□ -0.55
UPF3B-204ENST00000619445 RBP3P10745 1247 aa11.64□□□□□ -0.55
UPF3B-204ENST00000619445 ZNF28P17035 718 aa11.64□□□□□ -0.55
UPF3B-204ENST00000619445 RBL1P28749 1068 aa11.64□□□□□ -0.55
UPF3B-204ENST00000619445 PMS2P54278 862 aa11.64□□□□□ -0.55
UPF3B-204ENST00000619445 RWDD2BP57060 319 aa11.64□□□□□ -0.55
UPF3B-204ENST00000619445 GSDMDP57764 484 aa11.64□□□□□ -0.55
UPF3B-204ENST00000619445 RPS15P62841 145 aaKnown RBP11.64□□□□□ -0.55
UPF3B-204ENST00000619445 ADCY2Q08462 1091 aa11.64□□□□□ -0.55
UPF3B-204ENST00000619445 KRT33BQ14525 404 aa11.64□□□□□ -0.55
UPF3B-204ENST00000619445 GSE1Q14687 1217 aa11.64□□□□□ -0.55
UPF3B-204ENST00000619445 PTRH1Q86Y79 214 aaKnown RBP11.64□□□□□ -0.55
UPF3B-204ENST00000619445 APLFQ8IW19 511 aaPredicted RBP11.64□□□□□ -0.55
UPF3B-204ENST00000619445 D2HGDHQ8N465 521 aa11.64□□□□□ -0.55
UPF3B-204ENST00000619445 TTC13Q8NBP0 860 aa11.64□□□□□ -0.55
UPF3B-204ENST00000619445 OR4K2Q8NGD2 314 aa11.64□□□□□ -0.55
UPF3B-204ENST00000619445 ACTL9Q8TC94 416 aa11.64□□□□□ -0.55
UPF3B-204ENST00000619445 HM13Q8TCT9 377 aa11.64□□□□□ -0.55
UPF3B-204ENST00000619445 C12orf66Q96MD2 445 aa11.64□□□□□ -0.55
UPF3B-204ENST00000619445 PANX2Q96RD6 677 aa11.64□□□□□ -0.55
UPF3B-204ENST00000619445 COPS8Q99627 209 aa11.64□□□□□ -0.55
UPF3B-204ENST00000619445 HEMGNQ9BXL5 484 aa11.64□□□□□ -0.55
UPF3B-204ENST00000619445 OSBPL8Q9BZF1 889 aa11.64□□□□□ -0.55
UPF3B-204ENST00000619445 TWSG1Q9GZX9 223 aa11.64□□□□□ -0.55
UPF3B-204ENST00000619445 ARNT2Q9HBZ2 717 aa11.64□□□□□ -0.55
UPF3B-204ENST00000619445 SLC24A2Q9UI40 661 aa11.64□□□□□ -0.55
UPF3B-204ENST00000619445 PSMD13Q9UNM6 376 aa11.64□□□□□ -0.55
UPF3B-204ENST00000619445 PIKFYVEQ9Y2I7 2098 aa11.63□□□□□ -0.55
UPF3B-204ENST00000619445 PIPSLA2A3N6 862 aa11.63□□□□□ -0.55
UPF3B-204ENST00000619445 BTNL10A8MVZ5 291 aa11.63□□□□□ -0.55
UPF3B-204ENST00000619445 QSOX1O00391 747 aa11.63□□□□□ -0.55
UPF3B-204ENST00000619445 IFRD1O00458 451 aaPredicted RBP11.63□□□□□ -0.55
UPF3B-204ENST00000619445 PJA2O43164 708 aa11.63□□□□□ -0.55
UPF3B-204ENST00000619445 AGTP01019 485 aa11.63□□□□□ -0.55
UPF3B-204ENST00000619445 KLK3P07288 261 aaPredicted RBP11.63□□□□□ -0.55
UPF3B-204ENST00000619445 MSL3P1P0C860 447 aa11.63□□□□□ -0.55
UPF3B-204ENST00000619445 PBLDP30039 288 aaPredicted RBP11.63□□□□□ -0.55
UPF3B-204ENST00000619445 ADRA1AP35348 466 aa11.63□□□□□ -0.55
UPF3B-204ENST00000619445 EIF3EP60228 445 aaKnown RBP11.63□□□□□ -0.55
UPF3B-204ENST00000619445 OTUD4Q01804 1114 aaKnown RBP11.63□□□□□ -0.55
UPF3B-204ENST00000619445 RPA4Q13156 261 aa11.63□□□□□ -0.55
UPF3B-204ENST00000619445 ERV3-1Q14264 604 aa11.63□□□□□ -0.55
UPF3B-204ENST00000619445 LLGL1Q15334 1064 aa11.63□□□□□ -0.55
UPF3B-204ENST00000619445 ANKRD20A2Q5SQ80 823 aa11.63□□□□□ -0.55
UPF3B-204ENST00000619445 ANKRD20A1Q5TYW2 823 aa11.63□□□□□ -0.55
UPF3B-204ENST00000619445 ANKRD20A3Q5VUR7 823 aa11.63□□□□□ -0.55
UPF3B-204ENST00000619445 DARS2Q6PI48 645 aaKnown RBP11.63□□□□□ -0.55
UPF3B-204ENST00000619445 FAM83HQ6ZRV2 1179 aaPredicted RBP11.63□□□□□ -0.55
UPF3B-204ENST00000619445 SNX20Q7Z614 316 aa11.63□□□□□ -0.55
UPF3B-204ENST00000619445 SYVN1Q86TM6 617 aa11.63□□□□□ -0.55
UPF3B-204ENST00000619445 TMTC1Q8IUR5 882 aa11.63□□□□□ -0.55
UPF3B-204ENST00000619445 NXPE1Q8N323 547 aa11.63□□□□□ -0.55
UPF3B-204ENST00000619445 TEX19Q8NA77 164 aa11.63□□□□□ -0.55
UPF3B-204ENST00000619445 ACVR1CQ8NER5 493 aa11.63□□□□□ -0.55
UPF3B-204ENST00000619445 GPR150Q8NGU9 434 aa11.63□□□□□ -0.55
UPF3B-204ENST00000619445 ELMO2Q96JJ3 720 aa11.63□□□□□ -0.55
UPF3B-204ENST00000619445 SPATA13Q96N96 652 aa11.63□□□□□ -0.55
UPF3B-204ENST00000619445 LRFN5Q96NI6 719 aa11.63□□□□□ -0.55
UPF3B-204ENST00000619445 MAP3K3Q99759 626 aa11.63□□□□□ -0.55
UPF3B-204ENST00000619445 WWP1Q9H0M0 922 aa11.63□□□□□ -0.55
UPF3B-204ENST00000619445 EPN3Q9H201 632 aa11.63□□□□□ -0.55
UPF3B-204ENST00000619445 ZNF71Q9NQZ8 489 aaPredicted RBP11.63□□□□□ -0.55
UPF3B-204ENST00000619445 C1GALT1Q9NS00 363 aa11.63□□□□□ -0.55
UPF3B-204ENST00000619445 KCND1Q9NSA2 647 aa11.63□□□□□ -0.55
UPF3B-204ENST00000619445 BTRCQ9Y297 605 aa11.63□□□□□ -0.55
UPF3B-204ENST00000619445 MAN2B2Q9Y2E5 1009 aa11.63□□□□□ -0.55
UPF3B-204ENST00000619445 ARL5AQ9Y689 179 aa11.63□□□□□ -0.55
UPF3B-204ENST00000619445 SPTBN1Q01082 2364 aaKnown RBP11.62□□□□□ -0.55
UPF3B-204ENST00000619445 F8W8V4 182 aa11.62□□□□□ -0.55
UPF3B-204ENST00000619445 PYCARD-AS1I3L0S3 204 aa11.62□□□□□ -0.55
UPF3B-204ENST00000619445 KCNN4O15554 427 aa11.62□□□□□ -0.55
UPF3B-204ENST00000619445 PSMD3O43242 534 aa11.62□□□□□ -0.55
UPF3B-204ENST00000619445 BUD23O43709 281 aaKnown RBP11.62□□□□□ -0.55
UPF3B-204ENST00000619445 PTMAP06454 111 aaKnown RBP11.62□□□□□ -0.55
UPF3B-204ENST00000619445 ATP1B2P14415 290 aaPredicted RBP11.62□□□□□ -0.55
UPF3B-204ENST00000619445 FOLR1P15328 257 aa11.62□□□□□ -0.55
UPF3B-204ENST00000619445 F8A1P23610 371 aa11.62□□□□□ -0.55
UPF3B-204ENST00000619445 PTPN4P29074 926 aa11.62□□□□□ -0.55
UPF3B-204ENST00000619445 CD151P48509 253 aa11.62□□□□□ -0.55
UPF3B-204ENST00000619445 MARCKSL1P49006 195 aa11.62□□□□□ -0.55
UPF3B-204ENST00000619445 PRLHRP49683 370 aa11.62□□□□□ -0.55
UPF3B-204ENST00000619445 NAP1L1P55209 391 aaKnown RBP11.62□□□□□ -0.55
UPF3B-204ENST00000619445 FOXK1P85037 733 aa11.62□□□□□ -0.55
UPF3B-204ENST00000619445 SKIDA1Q1XH10 827 aa11.62□□□□□ -0.55
UPF3B-204ENST00000619445 CAPRIN2Q6IMN6 1127 aaKnown RBP11.62□□□□□ -0.55
UPF3B-204ENST00000619445 PWWP2BQ6NUJ5 590 aa11.62□□□□□ -0.55
UPF3B-204ENST00000619445 ATCAYQ86WG3 371 aa11.62□□□□□ -0.55
UPF3B-204ENST00000619445 TMEM126BQ8IUX1 230 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms