RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-223	ENST00000618944	PCNA	P12004	261 aa		11.03	□□□□□ -0.64
TP53-223	ENST00000618944	ZNF23	P17027	643 aa		11.03	□□□□□ -0.64
TP53-223	ENST00000618944	CDH2	P19022	906 aa	Predicted RBP	11.03	□□□□□ -0.64
TP53-223	ENST00000618944	CD9	P21926	228 aa		11.03	□□□□□ -0.64
TP53-223	ENST00000618944	RFC2	P35250	354 aa		11.03	□□□□□ -0.64
TP53-223	ENST00000618944	ADAR	P55265	1226 aa	Known RBP	11.03	□□□□□ -0.64
TP53-223	ENST00000618944	EMX2	Q04743	252 aa		11.03	□□□□□ -0.64
TP53-223	ENST00000618944	VEPH1	Q14D04	833 aa		11.03	□□□□□ -0.64
TP53-223	ENST00000618944	PCBP2	Q15366	365 aa	Known RBP eCLIP	11.03	□□□□□ -0.64	1e-13	■■■■■ 48
TP53-223	ENST00000618944	OTUD3	Q5T2D3	398 aa	Predicted RBP	11.03	□□□□□ -0.64
TP53-223	ENST00000618944	IRAK1BP1	Q5VVH5	260 aa		11.03	□□□□□ -0.64
TP53-223	ENST00000618944	DLEU7	Q6UYE1	221 aa		11.03	□□□□□ -0.64
TP53-223	ENST00000618944	TPGS1	Q6ZTW0	290 aa		11.03	□□□□□ -0.64
TP53-223	ENST00000618944	ADAMTS19	Q8TE59	1207 aa		11.03	□□□□□ -0.64
TP53-223	ENST00000618944	ZFP14	Q9HCL3	533 aa		11.03	□□□□□ -0.64
TP53-223	ENST00000618944	ZNF334	Q9HCZ1	680 aa	Predicted RBP	11.03	□□□□□ -0.64
TP53-223	ENST00000618944	PADI4	Q9UM07	663 aa		11.03	□□□□□ -0.64
TP53-223	ENST00000618944	TNPO3	Q9Y5L0	923 aa	Known RBP	11.03	□□□□□ -0.64
TP53-223	ENST00000618944	CPQ	Q9Y646	472 aa		11.03	□□□□□ -0.64
TP53-223	ENST00000618944	TYW5	A2RUC4	315 aa	Known RBP	11.02	□□□□□ -0.65
TP53-223	ENST00000618944	RAD51B	O15315	384 aa		11.02	□□□□□ -0.65
TP53-223	ENST00000618944	EEFSEC	P57772	596 aa	Known RBP	11.02	□□□□□ -0.65
TP53-223	ENST00000618944	BCL2L1	Q07817	233 aa		11.02	□□□□□ -0.65
TP53-223	ENST00000618944	NFATC2	Q13469	925 aa		11.02	□□□□□ -0.65
TP53-223	ENST00000618944	PTGR1	Q14914	329 aa		11.02	□□□□□ -0.65
TP53-223	ENST00000618944	PLCL1	Q15111	1095 aa		11.02	□□□□□ -0.65
TP53-223	ENST00000618944	CHRNA6	Q15825	494 aa		11.02	□□□□□ -0.65
TP53-223	ENST00000618944	ADRM1	Q16186	407 aa		11.02	□□□□□ -0.65
TP53-223	ENST00000618944	PYCR3	Q53H96	274 aa		11.02	□□□□□ -0.65
TP53-223	ENST00000618944	ADAMTSL2	Q86TH1	951 aa		11.02	□□□□□ -0.65
TP53-223	ENST00000618944	TSPAN33	Q86UF1	283 aa		11.02	□□□□□ -0.65
TP53-223	ENST00000618944	PTRH1	Q86Y79	214 aa	Known RBP	11.02	□□□□□ -0.65
TP53-223	ENST00000618944	MFSD2A	Q8NA29	543 aa		11.02	□□□□□ -0.65
TP53-223	ENST00000618944	ALG14	Q96F25	216 aa		11.02	□□□□□ -0.65
TP53-223	ENST00000618944	PHF12	Q96QT6	1004 aa		11.02	□□□□□ -0.65
TP53-223	ENST00000618944	LRRC3	Q9BY71	257 aa		11.02	□□□□□ -0.65
TP53-223	ENST00000618944	PTBP2	Q9UKA9	531 aa	Known RBP	11.02	□□□□□ -0.65
TP53-223	ENST00000618944	SLC8A2	Q9UPR5	921 aa		11.02	□□□□□ -0.65
TP53-223	ENST00000618944	PCDHB1	Q9Y5F3	818 aa		11.02	□□□□□ -0.65
TP53-223	ENST00000618944	CLOCK	O15516	846 aa		11.01	□□□□□ -0.65
TP53-223	ENST00000618944	RASAL1	O95294	804 aa		11.01	□□□□□ -0.65
TP53-223	ENST00000618944	SNAP29	O95721	258 aa		11.01	□□□□□ -0.65
TP53-223	ENST00000618944	OTC	P00480	354 aa		11.01	□□□□□ -0.65
TP53-223	ENST00000618944	ASL	P04424	464 aa		11.01	□□□□□ -0.65
TP53-223	ENST00000618944	BPI	P17213	487 aa		11.01	□□□□□ -0.65
TP53-223	ENST00000618944	CA8	P35219	290 aa		11.01	□□□□□ -0.65
TP53-223	ENST00000618944	NAA20	P61599	178 aa		11.01	□□□□□ -0.65
TP53-223	ENST00000618944	RPL38	P63173	70 aa	Known RBP	11.01	□□□□□ -0.65
TP53-223	ENST00000618944	TRAF3	Q13114	568 aa		11.01	□□□□□ -0.65
TP53-223	ENST00000618944	ZIK1	Q3SY52	487 aa	Predicted RBP	11.01	□□□□□ -0.65
TP53-223	ENST00000618944	SLC36A3	Q495N2	470 aa		11.01	□□□□□ -0.65
TP53-223	ENST00000618944	AASDH	Q4L235	1098 aa	Predicted RBP	11.01	□□□□□ -0.65
TP53-223	ENST00000618944	TMTC4	Q5T4D3	741 aa		11.01	□□□□□ -0.65
TP53-223	ENST00000618944	TMEM214	Q6NUQ4	689 aa	Known RBP	11.01	□□□□□ -0.65
TP53-223	ENST00000618944	CERS6	Q6ZMG9	384 aa		11.01	□□□□□ -0.65
TP53-223	ENST00000618944	LPCAT2	Q7L5N7	544 aa		11.01	□□□□□ -0.65
TP53-223	ENST00000618944	PDLIM5	Q96HC4	596 aa	Known RBP	11.01	□□□□□ -0.65
TP53-223	ENST00000618944	FAM126A	Q9BYI3	521 aa	Predicted RBP	11.01	□□□□□ -0.65
TP53-223	ENST00000618944	LATS2	Q9NRM7	1088 aa		11.01	□□□□□ -0.65
TP53-223	ENST00000618944	WWOX	Q9NZC7	414 aa		11.01	□□□□□ -0.65
TP53-223	ENST00000618944	KL	Q9UEF7	1012 aa		11.01	□□□□□ -0.65
TP53-223	ENST00000618944	CRLS1	Q9UJA2	301 aa		11.01	□□□□□ -0.65
TP53-223	ENST00000618944	TMCO1	Q9UM00	188 aa		11.01	□□□□□ -0.65
TP53-223	ENST00000618944	MAGED1	Q9Y5V3	778 aa	Predicted RBP	11.01	□□□□□ -0.65
TP53-223	ENST00000618944	DFNA5	O60443	496 aa		11.01	□□□□□ -0.65
TP53-223	ENST00000618944	GREM1	O60565	184 aa		11.01	□□□□□ -0.65
TP53-223	ENST00000618944	LDLR	P01130	860 aa		11.01	□□□□□ -0.65
TP53-223	ENST00000618944	ENO2	P09104	434 aa	Predicted RBP	11.01	□□□□□ -0.65
TP53-223	ENST00000618944	NFKBIA	P25963	317 aa		11.01	□□□□□ -0.65
TP53-223	ENST00000618944	HTR1E	P28566	365 aa		11.01	□□□□□ -0.65
TP53-223	ENST00000618944	RGS4	P49798	205 aa		11.01	□□□□□ -0.65
TP53-223	ENST00000618944	CLCN2	P51788	898 aa		11.01	□□□□□ -0.65
TP53-223	ENST00000618944	CYP4F8	P98187	520 aa		11.01	□□□□□ -0.65
TP53-223	ENST00000618944	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	11.01	□□□□□ -0.65
TP53-223	ENST00000618944	SNX20	Q7Z614	316 aa		11.01	□□□□□ -0.65
TP53-223	ENST00000618944	SPRED1	Q7Z699	444 aa		11.01	□□□□□ -0.65
TP53-223	ENST00000618944	PROSER1	Q86XN7	944 aa		11.01	□□□□□ -0.65
TP53-223	ENST00000618944	ADGRG2	Q8IZP9	1017 aa		11.01	□□□□□ -0.65
TP53-223	ENST00000618944	RBFA	Q8N0V3	343 aa		11.01	□□□□□ -0.65
TP53-223	ENST00000618944	DTWD1	Q8N5C7	304 aa		11.01	□□□□□ -0.65
TP53-223	ENST00000618944	PACRGL	Q8N7B6	248 aa		11.01	□□□□□ -0.65
TP53-223	ENST00000618944	HJURP	Q8NCD3	748 aa	Predicted RBP	11.01	□□□□□ -0.65
TP53-223	ENST00000618944	CLHC1	Q8NHS4	586 aa		11.01	□□□□□ -0.65
TP53-223	ENST00000618944	PXYLP1	Q8TE99	480 aa		11.01	□□□□□ -0.65
TP53-223	ENST00000618944	NSMCE2	Q96MF7	247 aa		11.01	□□□□□ -0.65
TP53-223	ENST00000618944	CGREF1	Q99674	301 aa		11.01	□□□□□ -0.65
TP53-223	ENST00000618944	THUMPD3	Q9BV44	507 aa	Known RBP	11.01	□□□□□ -0.65
TP53-223	ENST00000618944	HEBP1	Q9NRV9	189 aa		11.01	□□□□□ -0.65
TP53-223	ENST00000618944	RSL24D1	Q9UHA3	163 aa	Known RBP	11.01	□□□□□ -0.65
TP53-223	ENST00000618944	GNPTG	Q9UJJ9	305 aa		11.01	□□□□□ -0.65
TP53-223	ENST00000618944	FADS3	Q9Y5Q0	445 aa		11.01	□□□□□ -0.65
TP53-223	ENST00000618944	ST14	Q9Y5Y6	855 aa		11.01	□□□□□ -0.65
TP53-223	ENST00000618944	GLYATL1P3	A0A0U1RQE8	302 aa		11	□□□□□ -0.65
TP53-223	ENST00000618944	LOC730098	B7Z3J9	87 aa		11	□□□□□ -0.65
TP53-223	ENST00000618944	TRMU	O75648	421 aa	Known RBP	11	□□□□□ -0.65
TP53-223	ENST00000618944	EFEMP2	O95967	443 aa		11	□□□□□ -0.65
TP53-223	ENST00000618944	TRBC1	P01850	177 aa		11	□□□□□ -0.65
TP53-223	ENST00000618944	ITGAL	P20701	1170 aa		11	□□□□□ -0.65
TP53-223	ENST00000618944	MYF6	P23409	242 aa		11	□□□□□ -0.65
TP53-223	ENST00000618944	RANBP1	P43487	201 aa		11	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms