RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 TMEM159Q96B96 161 aa15.66■□□□□ 0.1
BRCA1-228ENST00000618469 ZNF778Q96MU6 729 aa15.66■□□□□ 0.1
BRCA1-228ENST00000618469 WWP1Q9H0M0 922 aa15.66■□□□□ 0.1
BRCA1-228ENST00000618469 UCK1Q9HA47 277 aa15.66■□□□□ 0.1
BRCA1-228ENST00000618469 IMP3Q9NV31 184 aaKnown RBP15.66■□□□□ 0.1
BRCA1-228ENST00000618469 KLHL33A6NCF5 533 aa15.65■□□□□ 0.1
BRCA1-228ENST00000618469 CES2O00748 559 aa15.65■□□□□ 0.1
BRCA1-228ENST00000618469 GOT2P00505 430 aaKnown RBP15.65■□□□□ 0.1
BRCA1-228ENST00000618469 COILP38432 576 aaPredicted RBP15.65■□□□□ 0.1
BRCA1-228ENST00000618469 ETV5P41161 510 aa15.65■□□□□ 0.1
BRCA1-228ENST00000618469 MAPK10P53779 464 aa15.65■□□□□ 0.1
BRCA1-228ENST00000618469 GNG11P61952 73 aa15.65■□□□□ 0.1
BRCA1-228ENST00000618469 PRAMEP78395 509 aa15.65■□□□□ 0.1
BRCA1-228ENST00000618469 SQSTM1Q13501 440 aa15.65■□□□□ 0.1
BRCA1-228ENST00000618469 TRA2AQ13595 282 aaKnown RBP eCLIP15.65■□□□□ 0.1
BRCA1-228ENST00000618469 GPR18Q14330 331 aa15.65■□□□□ 0.1
BRCA1-228ENST00000618469 RPE65Q16518 533 aa15.65■□□□□ 0.1
BRCA1-228ENST00000618469 METRNLQ641Q3 311 aa15.65■□□□□ 0.1
BRCA1-228ENST00000618469 DUS1LQ6P1R4 473 aaKnown RBP15.65■□□□□ 0.1
BRCA1-228ENST00000618469 ZNF534Q76KX8 674 aa15.65■□□□□ 0.1
BRCA1-228ENST00000618469 NLRP9Q7RTR0 991 aa15.65■□□□□ 0.1
BRCA1-228ENST00000618469 CLEC14AQ86T13 490 aa15.65■□□□□ 0.1
BRCA1-228ENST00000618469 RBM12BQ8IXT5 1001 aaKnown RBP15.65■□□□□ 0.1
BRCA1-228ENST00000618469 LILRA3Q8N6C8 439 aaPredicted RBP15.65■□□□□ 0.1
BRCA1-228ENST00000618469 HDAC10Q969S8 669 aa15.65■□□□□ 0.1
BRCA1-228ENST00000618469 LINC00615Q96LM1 132 aaPredicted RBP15.65■□□□□ 0.1
BRCA1-228ENST00000618469 EPB41L1Q9H4G0 881 aa15.65■□□□□ 0.1
BRCA1-228ENST00000618469 VPS37BQ9H9H4 285 aa15.65■□□□□ 0.1
BRCA1-228ENST00000618469 SLC40A1Q9NP59 571 aa15.65■□□□□ 0.1
BRCA1-228ENST00000618469 KLHL3Q9UH77 587 aa15.65■□□□□ 0.1
BRCA1-228ENST00000618469 RIMKLBQ9ULI2 386 aa15.65■□□□□ 0.1
BRCA1-228ENST00000618469 CFAP20Q9Y6A4 193 aaKnown RBP15.65■□□□□ 0.1
BRCA1-228ENST00000618469 COL12A1Q99715 3063 aa15.65■□□□□ 0.1
BRCA1-228ENST00000618469 SPTA1P02549 2419 aa15.64■□□□□ 0.09
BRCA1-228ENST00000618469 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.64■□□□□ 0.09
BRCA1-228ENST00000618469 TCRBV7S3A2A0A539 114 aa15.64■□□□□ 0.09
BRCA1-228ENST00000618469 UBXN7O94888 489 aa15.64■□□□□ 0.09
BRCA1-228ENST00000618469 MTHFD1P11586 935 aaKnown RBP15.64■□□□□ 0.09
BRCA1-228ENST00000618469 TYRP1P17643 537 aa15.64■□□□□ 0.09
BRCA1-228ENST00000618469 TCP1P17987 556 aaKnown RBP15.64■□□□□ 0.09
BRCA1-228ENST00000618469 CAPZBP47756 277 aa15.64■□□□□ 0.09
BRCA1-228ENST00000618469 GFERP55789 205 aa15.64■□□□□ 0.09
BRCA1-228ENST00000618469 ACVR1Q04771 509 aa15.64■□□□□ 0.09
BRCA1-228ENST00000618469 ITIH4Q14624 930 aa15.64■□□□□ 0.09
BRCA1-228ENST00000618469 KCNJ11Q14654 390 aa15.64■□□□□ 0.09
BRCA1-228ENST00000618469 PLCL1Q15111 1095 aa15.64■□□□□ 0.09
BRCA1-228ENST00000618469 WDR74Q6RFH5 385 aaPredicted RBP15.64■□□□□ 0.09
BRCA1-228ENST00000618469 XKR5Q6UX68 686 aa15.64■□□□□ 0.09
BRCA1-228ENST00000618469 CLDN19Q8N6F1 224 aa15.64■□□□□ 0.09
BRCA1-228ENST00000618469 OR6P1Q8NGX9 317 aa15.64■□□□□ 0.09
BRCA1-228ENST00000618469 JPH3Q8WXH2 748 aaPredicted RBP15.64■□□□□ 0.09
BRCA1-228ENST00000618469 RSC1A1Q92681 617 aa15.64■□□□□ 0.09
BRCA1-228ENST00000618469 RMDN2Q96LZ7 410 aa15.64■□□□□ 0.09
BRCA1-228ENST00000618469 C12orf66Q96MD2 445 aa15.64■□□□□ 0.09
BRCA1-228ENST00000618469 IL22Q9GZX6 179 aa15.64■□□□□ 0.09
BRCA1-228ENST00000618469 COG4Q9H9E3 785 aa15.64■□□□□ 0.09
BRCA1-228ENST00000618469 CHRAC1Q9NRG0 131 aa15.64■□□□□ 0.09
BRCA1-228ENST00000618469 SYBUQ9NX95 663 aa15.64■□□□□ 0.09
BRCA1-228ENST00000618469 BFARQ9NZS9 450 aa15.64■□□□□ 0.09
BRCA1-228ENST00000618469 ACSL5Q9ULC5 683 aa15.64■□□□□ 0.09
BRCA1-228ENST00000618469 MN1Q10571 1320 aaPredicted RBP15.64■□□□□ 0.09
BRCA1-228ENST00000618469 A8MU76 341 aa15.63■□□□□ 0.09
BRCA1-228ENST00000618469 AP3B1O00203 1094 aa15.63■□□□□ 0.09
BRCA1-228ENST00000618469 TMEM63AO94886 807 aa15.63■□□□□ 0.09
BRCA1-228ENST00000618469 AP2A2O94973 939 aa15.63■□□□□ 0.09
BRCA1-228ENST00000618469 POLBP06746 335 aa15.63■□□□□ 0.09
BRCA1-228ENST00000618469 CCL4P13236 92 aa15.63■□□□□ 0.09
BRCA1-228ENST00000618469 AMD1P17707 334 aa15.63■□□□□ 0.09
BRCA1-228ENST00000618469 MGAT1P26572 445 aa15.63■□□□□ 0.09
BRCA1-228ENST00000618469 SLC5A2P31639 672 aa15.63■□□□□ 0.09
BRCA1-228ENST00000618469 CSTF2P33240 577 aaKnown RBP eCLIP15.63■□□□□ 0.09
BRCA1-228ENST00000618469 NSG1P42857 185 aa15.63■□□□□ 0.09
BRCA1-228ENST00000618469 FNTAP49354 379 aa15.63■□□□□ 0.09
BRCA1-228ENST00000618469 CDK16Q00536 496 aa15.63■□□□□ 0.09
BRCA1-228ENST00000618469 SRSF1Q07955 248 aaKnown RBP eCLIP15.63■□□□□ 0.09
BRCA1-228ENST00000618469 GSE1Q14687 1217 aa15.63■□□□□ 0.09
BRCA1-228ENST00000618469 PCID2Q5JVF3 399 aa15.63■□□□□ 0.09
BRCA1-228ENST00000618469 ANKRD22Q5VYY1 191 aa15.63■□□□□ 0.09
BRCA1-228ENST00000618469 LRRC8BQ6P9F7 803 aa15.63■□□□□ 0.09
BRCA1-228ENST00000618469 PACS1Q6VY07 963 aa15.63■□□□□ 0.09
BRCA1-228ENST00000618469 FAM129CQ86XR2 697 aa15.63■□□□□ 0.09
BRCA1-228ENST00000618469 CFAP206Q8IYR0 622 aa15.63■□□□□ 0.09
BRCA1-228ENST00000618469 EXD3Q8N9H8 876 aa15.63■□□□□ 0.09
BRCA1-228ENST00000618469 AGBL5Q8NDL9 886 aa15.63■□□□□ 0.09
BRCA1-228ENST00000618469 SPDYE1Q8NFV5 336 aaPredicted RBP15.63■□□□□ 0.09
BRCA1-228ENST00000618469 OR4L1Q8NH43 312 aa15.63■□□□□ 0.09
BRCA1-228ENST00000618469 GRK7Q8WTQ7 553 aa15.63■□□□□ 0.09
BRCA1-228ENST00000618469 PEX13Q92968 403 aa15.63■□□□□ 0.09
BRCA1-228ENST00000618469 CAPZA3Q96KX2 299 aa15.63■□□□□ 0.09
BRCA1-228ENST00000618469 CCM2Q9BSQ5 444 aa15.63■□□□□ 0.09
BRCA1-228ENST00000618469 OGFRQ9NZT2 677 aa15.63■□□□□ 0.09
BRCA1-228ENST00000618469 PCDHGA7Q9Y5G6 932 aa15.63■□□□□ 0.09
BRCA1-228ENST00000618469 PRSS21Q9Y6M0 314 aa15.63■□□□□ 0.09
BRCA1-228ENST00000618469 PIKFYVEQ9Y2I7 2098 aa15.63■□□□□ 0.09
BRCA1-228ENST00000618469 DOPEY2Q9Y3R5 2298 aa15.63■□□□□ 0.09
BRCA1-228ENST00000618469 PRAMEF10O60809 474 aa15.62■□□□□ 0.09
BRCA1-228ENST00000618469 MAGEA6P43360 314 aa15.62■□□□□ 0.09
BRCA1-228ENST00000618469 NPY2RP49146 381 aa15.62■□□□□ 0.09
BRCA1-228ENST00000618469 SARNPP82979 210 aaKnown RBP15.62■□□□□ 0.09
BRCA1-228ENST00000618469 SEMA3AQ14563 771 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms