RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 CCNIQ14094 377 aa17.03■□□□□ 0.32
PCDHGC3-205ENST00000617641 BOP1Q14137 746 aaKnown RBP17.03■□□□□ 0.32
PCDHGC3-205ENST00000617641 ACOX1Q15067 660 aa17.03■□□□□ 0.32
PCDHGC3-205ENST00000617641 HNRNPA1L2Q32P51 320 aaKnown RBP17.03■□□□□ 0.32
PCDHGC3-205ENST00000617641 MMEL1Q495T6 779 aa17.03■□□□□ 0.32
PCDHGC3-205ENST00000617641 XKR7Q5GH72 579 aa17.03■□□□□ 0.32
PCDHGC3-205ENST00000617641 REP15Q6BDI9 236 aa17.03■□□□□ 0.32
PCDHGC3-205ENST00000617641 ERAP2Q6P179 960 aa17.03■□□□□ 0.32
PCDHGC3-205ENST00000617641 EFL1Q7Z2Z2 1120 aaKnown RBP17.03■□□□□ 0.32
PCDHGC3-205ENST00000617641 VRK3Q8IV63 474 aa17.03■□□□□ 0.32
PCDHGC3-205ENST00000617641 FUNDC1Q8IVP5 155 aa17.03■□□□□ 0.32
PCDHGC3-205ENST00000617641 ATP6V1E2Q96A05 226 aa17.03■□□□□ 0.32
PCDHGC3-205ENST00000617641 ERLEC1Q96DZ1 483 aa17.03■□□□□ 0.32
PCDHGC3-205ENST00000617641 IPPKQ9H8X2 491 aa17.03■□□□□ 0.32
PCDHGC3-205ENST00000617641 TRPV4Q9HBA0 871 aa17.03■□□□□ 0.32
PCDHGC3-205ENST00000617641 ZDHHC4Q9NPG8 344 aa17.03■□□□□ 0.32
PCDHGC3-205ENST00000617641 THG1LQ9NWX6 298 aaKnown RBP17.03■□□□□ 0.32
PCDHGC3-205ENST00000617641 STX18Q9P2W9 335 aaKnown RBP17.03■□□□□ 0.32
PCDHGC3-205ENST00000617641 PLK4O00444 970 aa17.03■□□□□ 0.32
PCDHGC3-205ENST00000617641 SPINT1O43278 529 aa17.03■□□□□ 0.32
PCDHGC3-205ENST00000617641 SGTAO43765 313 aa17.03■□□□□ 0.32
PCDHGC3-205ENST00000617641 VPS4BO75351 444 aa17.03■□□□□ 0.32
PCDHGC3-205ENST00000617641 KATNA1O75449 491 aa17.03■□□□□ 0.32
PCDHGC3-205ENST00000617641 PRNPP04156 253 aa17.03■□□□□ 0.32
PCDHGC3-205ENST00000617641 STX5Q13190 355 aa17.03■□□□□ 0.32
PCDHGC3-205ENST00000617641 ZNF234Q14588 700 aa17.03■□□□□ 0.32
PCDHGC3-205ENST00000617641 PDGFRLQ15198 375 aa17.03■□□□□ 0.32
PCDHGC3-205ENST00000617641 ZNF284Q2VY69 593 aa17.03■□□□□ 0.32
PCDHGC3-205ENST00000617641 SULT1C3Q6IMI6 304 aa17.03■□□□□ 0.32
PCDHGC3-205ENST00000617641 BEND7Q8N7W2 519 aaPredicted RBP17.03■□□□□ 0.32
PCDHGC3-205ENST00000617641 OR4F6Q8NGB9 312 aa17.03■□□□□ 0.32
PCDHGC3-205ENST00000617641 OR2T11Q8NH01 316 aa17.03■□□□□ 0.32
PCDHGC3-205ENST00000617641 SKA2Q8WVK7 121 aaPredicted RBP17.03■□□□□ 0.32
PCDHGC3-205ENST00000617641 ARRDC3Q96B67 414 aa17.03■□□□□ 0.32
PCDHGC3-205ENST00000617641 ZSCAN5AQ9BUG6 496 aa17.03■□□□□ 0.32
PCDHGC3-205ENST00000617641 CEP290O15078 2479 aa17.02■□□□□ 0.32
PCDHGC3-205ENST00000617641 EDDM13A0A1B0GTR0 161 aa17.02■□□□□ 0.32
PCDHGC3-205ENST00000617641 CFAP99D6REC4 459 aa17.02■□□□□ 0.32
PCDHGC3-205ENST00000617641 CAPN1P07384 714 aa17.02■□□□□ 0.32
PCDHGC3-205ENST00000617641 MSH3P20585 1137 aa17.02■□□□□ 0.32
PCDHGC3-205ENST00000617641 HTR6P50406 440 aa17.02■□□□□ 0.32
PCDHGC3-205ENST00000617641 THOP1P52888 689 aa17.02■□□□□ 0.32
PCDHGC3-205ENST00000617641 SLC34A1Q06495 639 aa17.02■□□□□ 0.32
PCDHGC3-205ENST00000617641 CDC16Q13042 620 aa17.02■□□□□ 0.32
PCDHGC3-205ENST00000617641 TRAF3Q13114 568 aa17.02■□□□□ 0.32
PCDHGC3-205ENST00000617641 GRM2Q14416 872 aa17.02■□□□□ 0.32
PCDHGC3-205ENST00000617641 GBX1Q14549 363 aa17.02■□□□□ 0.32
PCDHGC3-205ENST00000617641 TERB1Q8NA31 727 aa17.02■□□□□ 0.32
PCDHGC3-205ENST00000617641 HIPK4Q8NE63 616 aa17.02■□□□□ 0.32
PCDHGC3-205ENST00000617641 DDHD1Q8NEL9 900 aa17.02■□□□□ 0.32
PCDHGC3-205ENST00000617641 PIP4K2CQ8TBX8 421 aa17.02■□□□□ 0.32
PCDHGC3-205ENST00000617641 METTL6Q8TCB7 284 aa17.02■□□□□ 0.32
PCDHGC3-205ENST00000617641 SLC45A3Q96JT2 553 aa17.02■□□□□ 0.32
PCDHGC3-205ENST00000617641 CDCA3Q99618 268 aaPredicted RBP17.02■□□□□ 0.32
PCDHGC3-205ENST00000617641 CD244Q9BZW8 370 aa17.02■□□□□ 0.32
PCDHGC3-205ENST00000617641 RDH14Q9HBH5 336 aa17.02■□□□□ 0.32
PCDHGC3-205ENST00000617641 ZFP14Q9HCL3 533 aa17.02■□□□□ 0.32
PCDHGC3-205ENST00000617641 RAD18Q9NS91 495 aa17.02■□□□□ 0.32
PCDHGC3-205ENST00000617641 NDE1Q9NXR1 346 aa17.02■□□□□ 0.32
PCDHGC3-205ENST00000617641 CACNA2D2Q9NY47 1150 aa17.02■□□□□ 0.32
PCDHGC3-205ENST00000617641 OBP2AQ9NY56 170 aa17.02■□□□□ 0.32
PCDHGC3-205ENST00000617641 NFKBIL1Q9UBC1 381 aaPredicted RBP17.02■□□□□ 0.32
PCDHGC3-205ENST00000617641 ST14Q9Y5Y6 855 aa17.02■□□□□ 0.32
PCDHGC3-205ENST00000617641 OR2AG2A6NM03 316 aa17.02■□□□□ 0.31
PCDHGC3-205ENST00000617641 C9JVG2 144 aa17.02■□□□□ 0.31
PCDHGC3-205ENST00000617641 PRR35P0CG20 571 aa17.02■□□□□ 0.31
PCDHGC3-205ENST00000617641 ACADVLP49748 655 aa17.02■□□□□ 0.31
PCDHGC3-205ENST00000617641 DIO3P55073 304 aa17.02■□□□□ 0.31
PCDHGC3-205ENST00000617641 PIGGQ5H8A4 983 aa17.02■□□□□ 0.31
PCDHGC3-205ENST00000617641 ICE2Q659A1 982 aa17.02■□□□□ 0.31
PCDHGC3-205ENST00000617641 SYCE2Q6PIF2 218 aa17.02■□□□□ 0.31
PCDHGC3-205ENST00000617641 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.02■□□□□ 0.31
PCDHGC3-205ENST00000617641 MIER2Q8N344 545 aa17.02■□□□□ 0.31
PCDHGC3-205ENST00000617641 RNF148Q8N7C7 305 aa17.02■□□□□ 0.31
PCDHGC3-205ENST00000617641 OR8D1Q8WZ84 308 aa17.02■□□□□ 0.31
PCDHGC3-205ENST00000617641 SLC25A23Q9BV35 468 aa17.02■□□□□ 0.31
PCDHGC3-205ENST00000617641 PLA2G2FQ9BZM2 168 aa17.02■□□□□ 0.31
PCDHGC3-205ENST00000617641 STOML1Q9UBI4 398 aa17.02■□□□□ 0.31
PCDHGC3-205ENST00000617641 OPTCQ9UBM4 332 aa17.02■□□□□ 0.31
PCDHGC3-205ENST00000617641 MSRAQ9UJ68 235 aa17.02■□□□□ 0.31
PCDHGC3-205ENST00000617641 PDE10AQ9Y233 779 aa17.02■□□□□ 0.31
PCDHGC3-205ENST00000617641 COQ6Q9Y2Z9 468 aa17.02■□□□□ 0.31
PCDHGC3-205ENST00000617641 KIAA1549LQ6ZVL6 1849 aa17.01■□□□□ 0.31
PCDHGC3-205ENST00000617641 OTCP00480 354 aa17.01■□□□□ 0.31
PCDHGC3-205ENST00000617641 OPRD1P41143 372 aa17.01■□□□□ 0.31
PCDHGC3-205ENST00000617641 CCNG1P51959 295 aa17.01■□□□□ 0.31
PCDHGC3-205ENST00000617641 CEACAM7Q14002 265 aa17.01■□□□□ 0.31
PCDHGC3-205ENST00000617641 LRP8Q14114 963 aa17.01■□□□□ 0.31
PCDHGC3-205ENST00000617641 EIF4HQ15056 248 aaKnown RBP17.01■□□□□ 0.31
PCDHGC3-205ENST00000617641 ZNF423Q2M1K9 1284 aa17.01■□□□□ 0.31
PCDHGC3-205ENST00000617641 UBE2R2Q712K3 238 aaPredicted RBP17.01■□□□□ 0.31
PCDHGC3-205ENST00000617641 UBTD2Q8WUN7 234 aa17.01■□□□□ 0.31
PCDHGC3-205ENST00000617641 BTN2A2Q8WVV5 523 aa17.01■□□□□ 0.31
PCDHGC3-205ENST00000617641 NRG4Q8WWG1 115 aa17.01■□□□□ 0.31
PCDHGC3-205ENST00000617641 AP2M1Q96CW1 435 aa17.01■□□□□ 0.31
PCDHGC3-205ENST00000617641 HBEGFQ99075 208 aa17.01■□□□□ 0.31
PCDHGC3-205ENST00000617641 SERPINI1Q99574 410 aa17.01■□□□□ 0.31
PCDHGC3-205ENST00000617641 SLC28A3Q9HAS3 691 aa17.01■□□□□ 0.31
PCDHGC3-205ENST00000617641 FAM8A1Q9UBU6 413 aa17.01■□□□□ 0.31
PCDHGC3-205ENST00000617641 CDH7Q9ULB5 785 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms