RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 VPS39Q96JC1 886 aa12.91□□□□□ -0.34
FOXN3-219ENST00000615335 MLPHQ9BV36 600 aaPredicted RBP12.91□□□□□ -0.34
FOXN3-219ENST00000615335 NOL6Q9H6R4 1146 aaKnown RBP12.91□□□□□ -0.34
FOXN3-219ENST00000615335 SP140LQ9H930 580 aa12.91□□□□□ -0.34
FOXN3-219ENST00000615335 POLR1BQ9H9Y6 1135 aa12.91□□□□□ -0.34
FOXN3-219ENST00000615335 DUS2Q9NX74 493 aaKnown RBP12.91□□□□□ -0.34
FOXN3-219ENST00000615335 TRHDEQ9UKU6 1024 aa12.91□□□□□ -0.34
FOXN3-219ENST00000615335 A6NL46 340 aa12.9□□□□□ -0.34
FOXN3-219ENST00000615335 TAF4O00268 1085 aa12.9□□□□□ -0.34
FOXN3-219ENST00000615335 DDX5P17844 614 aaKnown RBP12.9□□□□□ -0.34
FOXN3-219ENST00000615335 POLR2CP19387 275 aaPredicted RBP12.9□□□□□ -0.34
FOXN3-219ENST00000615335 ME2P23368 584 aa12.9□□□□□ -0.34
FOXN3-219ENST00000615335 IDUAP35475 653 aa12.9□□□□□ -0.34
FOXN3-219ENST00000615335 CDH18Q13634 790 aa12.9□□□□□ -0.34
FOXN3-219ENST00000615335 ANO4Q32M45 955 aa12.9□□□□□ -0.34
FOXN3-219ENST00000615335 PIGGQ5H8A4 983 aa12.9□□□□□ -0.34
FOXN3-219ENST00000615335 HABP4Q5JVS0 413 aaKnown RBP12.9□□□□□ -0.34
FOXN3-219ENST00000615335 UGT3A1Q6NUS8 523 aa12.9□□□□□ -0.34
FOXN3-219ENST00000615335 CCDC117Q8IWD4 279 aaPredicted RBP12.9□□□□□ -0.34
FOXN3-219ENST00000615335 ATPAF2Q8N5M1 289 aa12.9□□□□□ -0.34
FOXN3-219ENST00000615335 CHAC2Q8WUX2 184 aa12.9□□□□□ -0.34
FOXN3-219ENST00000615335 PEX13Q92968 403 aa12.9□□□□□ -0.34
FOXN3-219ENST00000615335 GUCD1Q96NT3 240 aa12.9□□□□□ -0.34
FOXN3-219ENST00000615335 OR52B2Q96RD2 323 aa12.9□□□□□ -0.34
FOXN3-219ENST00000615335 APOL2Q9BQE5 337 aa12.9□□□□□ -0.34
FOXN3-219ENST00000615335 YTHDF1Q9BYJ9 559 aaKnown RBP12.9□□□□□ -0.34
FOXN3-219ENST00000615335 CLPBQ9H078 707 aa12.9□□□□□ -0.34
FOXN3-219ENST00000615335 UBE2ZQ9H832 354 aaPredicted RBP12.9□□□□□ -0.34
FOXN3-219ENST00000615335 TRPV4Q9HBA0 871 aa12.9□□□□□ -0.34
FOXN3-219ENST00000615335 CHRAC1Q9NRG0 131 aa12.9□□□□□ -0.34
FOXN3-219ENST00000615335 OXSMQ9NWU1 459 aa12.9□□□□□ -0.34
FOXN3-219ENST00000615335 SPEF1Q9Y4P9 236 aa12.9□□□□□ -0.34
FOXN3-219ENST00000615335 GFRA2O00451 464 aa12.9□□□□□ -0.34
FOXN3-219ENST00000615335 RNASEH2AO75792 299 aaKnown RBP12.9□□□□□ -0.34
FOXN3-219ENST00000615335 RHOCP08134 193 aa12.9□□□□□ -0.34
FOXN3-219ENST00000615335 TPH1P17752 444 aa12.9□□□□□ -0.34
FOXN3-219ENST00000615335 ITIH1P19827 911 aa12.9□□□□□ -0.34
FOXN3-219ENST00000615335 NFKB1P19838 968 aa12.9□□□□□ -0.34
FOXN3-219ENST00000615335 MPSTP25325 297 aa12.9□□□□□ -0.34
FOXN3-219ENST00000615335 HADHAP40939 763 aa12.9□□□□□ -0.34
FOXN3-219ENST00000615335 SELPLGQ14242 412 aa12.9□□□□□ -0.34
FOXN3-219ENST00000615335 HERC3Q15034 1050 aa12.9□□□□□ -0.34
FOXN3-219ENST00000615335 INAVAQ3KP66 663 aa12.9□□□□□ -0.34
FOXN3-219ENST00000615335 NXNQ6DKJ4 435 aa12.9□□□□□ -0.34
FOXN3-219ENST00000615335 ARHGAP36Q6ZRI8 547 aa12.9□□□□□ -0.34
FOXN3-219ENST00000615335 PACRGLQ8N7B6 248 aa12.9□□□□□ -0.34
FOXN3-219ENST00000615335 KYQ8NBH2 561 aa12.9□□□□□ -0.34
FOXN3-219ENST00000615335 ACVR1CQ8NER5 493 aa12.9□□□□□ -0.34
FOXN3-219ENST00000615335 TFAP2CQ92754 450 aa12.9□□□□□ -0.34
FOXN3-219ENST00000615335 IRF7Q92985 503 aa12.9□□□□□ -0.34
FOXN3-219ENST00000615335 HDAC11Q96DB2 347 aa12.9□□□□□ -0.34
FOXN3-219ENST00000615335 OTUB2Q96DC9 234 aa12.9□□□□□ -0.34
FOXN3-219ENST00000615335 HMCESQ96FZ2 354 aa12.9□□□□□ -0.34
FOXN3-219ENST00000615335 TSNARE1Q96NA8 513 aa12.9□□□□□ -0.34
FOXN3-219ENST00000615335 LENG8Q96PV6 779 aaPredicted RBP12.9□□□□□ -0.34
FOXN3-219ENST00000615335 ACE2Q9BYF1 805 aaPredicted RBP12.9□□□□□ -0.34
FOXN3-219ENST00000615335 IL22Q9GZX6 179 aa12.9□□□□□ -0.34
FOXN3-219ENST00000615335 TRIT1Q9H3H1 467 aaKnown RBP12.9□□□□□ -0.34
FOXN3-219ENST00000615335 SCUBE2Q9NQ36 999 aa12.9□□□□□ -0.34
FOXN3-219ENST00000615335 SPHK2Q9NRA0 654 aa12.9□□□□□ -0.34
FOXN3-219ENST00000615335 TLK1Q9UKI8 766 aa12.9□□□□□ -0.34
FOXN3-219ENST00000615335 SLC39A10Q9ULF5 831 aa12.9□□□□□ -0.34
FOXN3-219ENST00000615335 ANKRD6Q9Y2G4 727 aa12.9□□□□□ -0.34
FOXN3-219ENST00000615335 RAP2CQ9Y3L5 183 aa12.9□□□□□ -0.34
FOXN3-219ENST00000615335 TESMINQ9Y4I5 508 aa12.9□□□□□ -0.34
FOXN3-219ENST00000615335 ST14Q9Y5Y6 855 aa12.9□□□□□ -0.34
FOXN3-219ENST00000615335 A0A0D9SEW6 157 aa12.89□□□□□ -0.35
FOXN3-219ENST00000615335 NEDD8-MDP1E9PL57 170 aa12.89□□□□□ -0.35
FOXN3-219ENST00000615335 AKAP10O43572 662 aa12.89□□□□□ -0.35
FOXN3-219ENST00000615335 XRCC1P18887 633 aaPredicted RBP12.89□□□□□ -0.35
FOXN3-219ENST00000615335 FCARP24071 287 aa12.89□□□□□ -0.35
FOXN3-219ENST00000615335 PIK3R1P27986 724 aa12.89□□□□□ -0.35
FOXN3-219ENST00000615335 HOXD9P28356 352 aaPredicted RBP12.89□□□□□ -0.35
FOXN3-219ENST00000615335 PKLRP30613 574 aa12.89□□□□□ -0.35
FOXN3-219ENST00000615335 SERPINB5P36952 375 aa12.89□□□□□ -0.35
FOXN3-219ENST00000615335 OPRL1P41146 370 aa12.89□□□□□ -0.35
FOXN3-219ENST00000615335 ECT2LQ008S8 904 aa12.89□□□□□ -0.35
FOXN3-219ENST00000615335 FCHO2Q0JRZ9 810 aa12.89□□□□□ -0.35
FOXN3-219ENST00000615335 PGS1Q32NB8 556 aa12.89□□□□□ -0.35
FOXN3-219ENST00000615335 PARP15Q460N3 678 aa12.89□□□□□ -0.35
FOXN3-219ENST00000615335 NHSL2Q5HYW2 709 aa12.89□□□□□ -0.35
FOXN3-219ENST00000615335 LY6G5CQ5SRR4 150 aa12.89□□□□□ -0.35
FOXN3-219ENST00000615335 MPP7Q5T2T1 576 aa12.89□□□□□ -0.35
FOXN3-219ENST00000615335 AFMIDQ63HM1 303 aa12.89□□□□□ -0.35
FOXN3-219ENST00000615335 ZYG11AQ6WRX3 759 aa12.89□□□□□ -0.35
FOXN3-219ENST00000615335 ELMOD2Q8IZ81 293 aa12.89□□□□□ -0.35
FOXN3-219ENST00000615335 CLIP4Q8N3C7 705 aa12.89□□□□□ -0.35
FOXN3-219ENST00000615335 Q8N9G6 341 aaPredicted RBP12.89□□□□□ -0.35
FOXN3-219ENST00000615335 OR52K2Q8NGK3 314 aa12.89□□□□□ -0.35
FOXN3-219ENST00000615335 GABPB2Q8TAK5 448 aaPredicted RBP12.89□□□□□ -0.35
FOXN3-219ENST00000615335 RDH11Q8TC12 318 aa12.89□□□□□ -0.35
FOXN3-219ENST00000615335 ZUFSPQ96AP4 578 aa12.89□□□□□ -0.35
FOXN3-219ENST00000615335 NRBF2Q96F24 287 aa12.89□□□□□ -0.35
FOXN3-219ENST00000615335 ZFYVE19Q96K21 471 aa12.89□□□□□ -0.35
FOXN3-219ENST00000615335 BBS2Q9BXC9 721 aa12.89□□□□□ -0.35
FOXN3-219ENST00000615335 MUC3BQ9H195 1237 aa12.89□□□□□ -0.35
FOXN3-219ENST00000615335 OBP2AQ9NY56 170 aa12.89□□□□□ -0.35
FOXN3-219ENST00000615335 NYNRINQ9P2P1 1898 aaKnown RBP12.89□□□□□ -0.35
FOXN3-219ENST00000615335 NEMP1O14524 444 aa12.89□□□□□ -0.35
FOXN3-219ENST00000615335 AIM2O14862 343 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms