RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 ATXN3P54252 364 aaPredicted RBP18.82■□□□□ 0.6
MMP28-204ENST00000615136 NAA20P61599 178 aa18.82■□□□□ 0.6
MMP28-204ENST00000615136 SAMD4BQ5PRF9 694 aaKnown RBP18.82■□□□□ 0.6
MMP28-204ENST00000615136 NAIF1Q69YI7 327 aaPredicted RBP18.82■□□□□ 0.6
MMP28-204ENST00000615136 MACC1Q6ZN28 852 aa18.82■□□□□ 0.6
MMP28-204ENST00000615136 HSD11B1LQ7Z5J1 315 aa18.82■□□□□ 0.6
MMP28-204ENST00000615136 DUS3LQ96G46 650 aaKnown RBP18.82■□□□□ 0.6
MMP28-204ENST00000615136 CEP290O15078 2479 aa18.82■□□□□ 0.6
MMP28-204ENST00000615136 PRRT4C9JH25 899 aa18.81■□□□□ 0.6
MMP28-204ENST00000615136 SLC9A3R1O14745 358 aaPredicted RBP18.81■□□□□ 0.6
MMP28-204ENST00000615136 SNX2O60749 519 aa18.81■□□□□ 0.6
MMP28-204ENST00000615136 TULP3O75386 442 aa18.81■□□□□ 0.6
MMP28-204ENST00000615136 POU2F2P09086 479 aa18.81■□□□□ 0.6
MMP28-204ENST00000615136 LINC00032P0C843 101 aa18.81■□□□□ 0.6
MMP28-204ENST00000615136 METAP1P53582 386 aa18.81■□□□□ 0.6
MMP28-204ENST00000615136 IRX1P78414 480 aaPredicted RBP18.81■□□□□ 0.6
MMP28-204ENST00000615136 RHDQ02161 417 aa18.81■□□□□ 0.6
MMP28-204ENST00000615136 GRB7Q14451 532 aa18.81■□□□□ 0.6
MMP28-204ENST00000615136 TLR1Q15399 786 aa18.81■□□□□ 0.6
MMP28-204ENST00000615136 PHKG1Q16816 387 aa18.81■□□□□ 0.6
MMP28-204ENST00000615136 GAB4Q2WGN9 574 aa18.81■□□□□ 0.6
MMP28-204ENST00000615136 ZBTB2Q8N680 514 aa18.81■□□□□ 0.6
MMP28-204ENST00000615136 ZNF557Q8N988 423 aaPredicted RBP18.81■□□□□ 0.6
MMP28-204ENST00000615136 OR52B6Q8NGF0 335 aa18.81■□□□□ 0.6
MMP28-204ENST00000615136 GBP5Q96PP8 586 aa18.81■□□□□ 0.6
MMP28-204ENST00000615136 CDK15Q96Q40 435 aa18.81■□□□□ 0.6
MMP28-204ENST00000615136 TSC22D3Q99576 134 aa18.81■□□□□ 0.6
MMP28-204ENST00000615136 EPOPA6NHQ4 379 aa18.81■□□□□ 0.6
MMP28-204ENST00000615136 TXNDC9O14530 226 aa18.81■□□□□ 0.6
MMP28-204ENST00000615136 DNAJA2O60884 412 aa18.81■□□□□ 0.6
MMP28-204ENST00000615136 MTX2O75431 263 aa18.81■□□□□ 0.6
MMP28-204ENST00000615136 RNASEH2AO75792 299 aaKnown RBP18.81■□□□□ 0.6
MMP28-204ENST00000615136 TIMP2P16035 220 aa18.81■□□□□ 0.6
MMP28-204ENST00000615136 CHN2P52757 468 aa18.81■□□□□ 0.6
MMP28-204ENST00000615136 RALGDSQ12967 914 aa18.81■□□□□ 0.6
MMP28-204ENST00000615136 C6orf10Q5SRN2 563 aa18.81■□□□□ 0.6
MMP28-204ENST00000615136 DDIASQ8IXT1 998 aa18.81■□□□□ 0.6
MMP28-204ENST00000615136 PLPP6Q8IY26 295 aa18.81■□□□□ 0.6
MMP28-204ENST00000615136 PCYOX1LQ8NBM8 494 aa18.81■□□□□ 0.6
MMP28-204ENST00000615136 SLC45A3Q96JT2 553 aa18.81■□□□□ 0.6
MMP28-204ENST00000615136 HGH1Q9BTY7 390 aa18.81■□□□□ 0.6
MMP28-204ENST00000615136 PCDHAC1Q9H158 963 aa18.81■□□□□ 0.6
MMP28-204ENST00000615136 Q9H521 79 aa18.81■□□□□ 0.6
MMP28-204ENST00000615136 PCDH12Q9NPG4 1184 aa18.81■□□□□ 0.6
MMP28-204ENST00000615136 ELOVL2Q9NXB9 296 aa18.81■□□□□ 0.6
MMP28-204ENST00000615136 ZDHHC3Q9NYG2 299 aa18.81■□□□□ 0.6
MMP28-204ENST00000615136 C15orf38-AP3S2A0A0A6YYH1 394 aa18.8■□□□□ 0.6
MMP28-204ENST00000615136 TCRBV3S1A0A5B6 114 aa18.8■□□□□ 0.6
MMP28-204ENST00000615136 MATN4O95460 622 aa18.8■□□□□ 0.6
MMP28-204ENST00000615136 GUCA1CO95843 209 aa18.8■□□□□ 0.6
MMP28-204ENST00000615136 FESP07332 822 aa18.8■□□□□ 0.6
MMP28-204ENST00000615136 DUSP6Q16828 381 aa18.8■□□□□ 0.6
MMP28-204ENST00000615136 KIF19Q2TAC6 998 aa18.8■□□□□ 0.6
MMP28-204ENST00000615136 LYPLAL1Q5VWZ2 237 aa18.8■□□□□ 0.6
MMP28-204ENST00000615136 PDE12Q6L8Q7 609 aaKnown RBP18.8■□□□□ 0.6
MMP28-204ENST00000615136 TXNDC11Q6PKC3 985 aa18.8■□□□□ 0.6
MMP28-204ENST00000615136 SCIMPQ6UWF3 145 aa18.8■□□□□ 0.6
MMP28-204ENST00000615136 DET1Q7L5Y6 550 aa18.8■□□□□ 0.6
MMP28-204ENST00000615136 ARPINQ7Z6K5 226 aa18.8■□□□□ 0.6
MMP28-204ENST00000615136 RETREG3Q86VR2 466 aa18.8■□□□□ 0.6
MMP28-204ENST00000615136 FGF13Q92913 245 aa18.8■□□□□ 0.6
MMP28-204ENST00000615136 ATP6V1E2Q96A05 226 aa18.8■□□□□ 0.6
MMP28-204ENST00000615136 GPATCH1Q9BRR8 931 aaKnown RBP18.8■□□□□ 0.6
MMP28-204ENST00000615136 NSUN3Q9H649 340 aaKnown RBP18.8■□□□□ 0.6
MMP28-204ENST00000615136 NUDT4Q9NZJ9 180 aa18.8■□□□□ 0.6
MMP28-204ENST00000615136 POLG2Q9UHN1 485 aa18.8■□□□□ 0.6
MMP28-204ENST00000615136 CNOT11Q9UKZ1 510 aaKnown RBP18.8■□□□□ 0.6
MMP28-204ENST00000615136 VPS4BO75351 444 aa18.79■□□□□ 0.6
MMP28-204ENST00000615136 LBPP18428 481 aa18.79■□□□□ 0.6
MMP28-204ENST00000615136 PEX19P40855 299 aa18.79■□□□□ 0.6
MMP28-204ENST00000615136 ETV3P41162 512 aa18.79■□□□□ 0.6
MMP28-204ENST00000615136 HSPA13P48723 471 aa18.79■□□□□ 0.6
MMP28-204ENST00000615136 PTPN5P54829 565 aa18.79■□□□□ 0.6
MMP28-204ENST00000615136 KCNC3Q14003 757 aa18.79■□□□□ 0.6
MMP28-204ENST00000615136 RBBP7Q16576 425 aa18.79■□□□□ 0.6
MMP28-204ENST00000615136 IRAK1BP1Q5VVH5 260 aa18.79■□□□□ 0.6
MMP28-204ENST00000615136 IL23RQ5VWK5 629 aa18.79■□□□□ 0.6
MMP28-204ENST00000615136 BRAT1Q6PJG6 821 aa18.79■□□□□ 0.6
MMP28-204ENST00000615136 Q6ZVL8 140 aa18.79■□□□□ 0.6
MMP28-204ENST00000615136 FRA10AC1Q70Z53 315 aa18.79■□□□□ 0.6
MMP28-204ENST00000615136 ETFBKMTQ8IXQ9 262 aa18.79■□□□□ 0.6
MMP28-204ENST00000615136 MIER2Q8N344 545 aa18.79■□□□□ 0.6
MMP28-204ENST00000615136 ASB16Q96NS5 453 aa18.79■□□□□ 0.6
MMP28-204ENST00000615136 ACOX2Q99424 681 aa18.79■□□□□ 0.6
MMP28-204ENST00000615136 COPS8Q99627 209 aa18.79■□□□□ 0.6
MMP28-204ENST00000615136 SDR39U1Q9NRG7 319 aaPredicted RBP18.79■□□□□ 0.6
MMP28-204ENST00000615136 IL36AQ9UHA7 158 aa18.79■□□□□ 0.6
MMP28-204ENST00000615136 DPP7Q9UHL4 492 aa18.79■□□□□ 0.6
MMP28-204ENST00000615136 ZMYM5Q9UJ78 669 aa18.79■□□□□ 0.6
MMP28-204ENST00000615136 TAPBPO15533 448 aa18.79■□□□□ 0.6
MMP28-204ENST00000615136 FFAR2O15552 330 aa18.79■□□□□ 0.6
MMP28-204ENST00000615136 HOXC11O43248 304 aaPredicted RBP18.79■□□□□ 0.6
MMP28-204ENST00000615136 AHCYL1O43865 530 aa18.79■□□□□ 0.6
MMP28-204ENST00000615136 OR4F21O95013 312 aa18.79■□□□□ 0.6
MMP28-204ENST00000615136 CCR7P32248 378 aa18.79■□□□□ 0.6
MMP28-204ENST00000615136 NSG1P42857 185 aa18.79■□□□□ 0.6
MMP28-204ENST00000615136 MRPL19P49406 292 aaKnown RBP18.79■□□□□ 0.6
MMP28-204ENST00000615136 SLC7A2P52569 658 aa18.79■□□□□ 0.6
MMP28-204ENST00000615136 POLR2LP62875 67 aaKnown RBP18.79■□□□□ 0.6
MMP28-204ENST00000615136 OGFOD2Q6N063 350 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms