RNA–Protein interactions for RNA: ENST00000613508.4

CBWD1-222, Transcript of COBW domain containing 1, human

TSL 5 BASIC

Gene CBWD1, Length 1,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD1-222	ENST00000613508	IGFBP7	Q16270	282 aa		10.86	□□□□□ -0.67
CBWD1-222	ENST00000613508	UGT8	Q16880	541 aa		10.86	□□□□□ -0.67
CBWD1-222	ENST00000613508	ITPRIPL1	Q6GPH6	555 aa		10.86	□□□□□ -0.67
CBWD1-222	ENST00000613508	CAPRIN2	Q6IMN6	1127 aa	Known RBP	10.86	□□□□□ -0.67
CBWD1-222	ENST00000613508	KLHDC8B	Q8IXV7	354 aa		10.86	□□□□□ -0.67
CBWD1-222	ENST00000613508	CCDC170	Q8IYT3	715 aa		10.86	□□□□□ -0.67
CBWD1-222	ENST00000613508	TC2N	Q8N9U0	490 aa		10.86	□□□□□ -0.67
CBWD1-222	ENST00000613508	THAP4	Q8WY91	577 aa		10.86	□□□□□ -0.67
CBWD1-222	ENST00000613508	MIB2	Q96AX9	1013 aa		10.86	□□□□□ -0.67
CBWD1-222	ENST00000613508	CALR3	Q96L12	384 aa	Known RBP	10.86	□□□□□ -0.67
CBWD1-222	ENST00000613508	LRFN5	Q96NI6	719 aa		10.86	□□□□□ -0.67
CBWD1-222	ENST00000613508	PPP1R2P1	Q96PQ5	205 aa		10.86	□□□□□ -0.67
CBWD1-222	ENST00000613508	INSM2	Q96T92	566 aa	Predicted RBP	10.86	□□□□□ -0.67
CBWD1-222	ENST00000613508	FERMT1	Q9BQL6	677 aa		10.86	□□□□□ -0.67
CBWD1-222	ENST00000613508	CCM2	Q9BSQ5	444 aa		10.86	□□□□□ -0.67
CBWD1-222	ENST00000613508	TWSG1	Q9GZX9	223 aa		10.86	□□□□□ -0.67
CBWD1-222	ENST00000613508	WWP1	Q9H0M0	922 aa		10.86	□□□□□ -0.67
CBWD1-222	ENST00000613508	IMP3	Q9NV31	184 aa	Known RBP	10.86	□□□□□ -0.67
CBWD1-222	ENST00000613508	HRASLS2	Q9NWW9	162 aa		10.86	□□□□□ -0.67
CBWD1-222	ENST00000613508	TLK1	Q9UKI8	766 aa		10.86	□□□□□ -0.67
CBWD1-222	ENST00000613508	BTRC	Q9Y297	605 aa		10.86	□□□□□ -0.67
CBWD1-222	ENST00000613508	AAR2	Q9Y312	384 aa	Known RBP	10.86	□□□□□ -0.67
CBWD1-222	ENST00000613508	ARL5A	Q9Y689	179 aa		10.86	□□□□□ -0.67
CBWD1-222	ENST00000613508	TEX15	Q9BXT5	2789 aa		10.85	□□□□□ -0.67
CBWD1-222	ENST00000613508	IGLV3-16	A0A075B6K0	115 aa		10.85	□□□□□ -0.67
CBWD1-222	ENST00000613508	C17orf113	A0A1B0GUU1	675 aa		10.85	□□□□□ -0.67
CBWD1-222	ENST00000613508	UBA6	A0AVT1	1052 aa	Predicted RBP	10.85	□□□□□ -0.67
CBWD1-222	ENST00000613508	CDC14C	A4D256	554 aa		10.85	□□□□□ -0.67
CBWD1-222	ENST00000613508		K7EM74	188 aa		10.85	□□□□□ -0.67
CBWD1-222	ENST00000613508	MATN2	O00339	956 aa		10.85	□□□□□ -0.67
CBWD1-222	ENST00000613508	CPNE3	O75131	537 aa	Known RBP	10.85	□□□□□ -0.67
CBWD1-222	ENST00000613508	ZNF189	O75820	626 aa	Predicted RBP	10.85	□□□□□ -0.67
CBWD1-222	ENST00000613508	SLC35G4	P0C7Q5	338 aa		10.85	□□□□□ -0.67
CBWD1-222	ENST00000613508	NDUFS1	P28331	727 aa		10.85	□□□□□ -0.67
CBWD1-222	ENST00000613508	RBL1	P28749	1068 aa		10.85	□□□□□ -0.67
CBWD1-222	ENST00000613508	AKT1	P31749	480 aa		10.85	□□□□□ -0.67
CBWD1-222	ENST00000613508	CTNNA1	P35221	906 aa	Known RBP	10.85	□□□□□ -0.67
CBWD1-222	ENST00000613508	PRLHR	P49683	370 aa		10.85	□□□□□ -0.67
CBWD1-222	ENST00000613508	ZNF140	P52738	457 aa	Predicted RBP	10.85	□□□□□ -0.67
CBWD1-222	ENST00000613508	XIAP	P98170	497 aa		10.85	□□□□□ -0.67
CBWD1-222	ENST00000613508	SEMA5A	Q13591	1074 aa		10.85	□□□□□ -0.67
CBWD1-222	ENST00000613508	PTPRCAP	Q14761	206 aa		10.85	□□□□□ -0.67
CBWD1-222	ENST00000613508	ZNF658B	Q4V348	819 aa	Predicted RBP	10.85	□□□□□ -0.67
CBWD1-222	ENST00000613508	IZUMO3	Q5VZ72	239 aa		10.85	□□□□□ -0.67
CBWD1-222	ENST00000613508	SARM1	Q6SZW1	724 aa		10.85	□□□□□ -0.67
CBWD1-222	ENST00000613508	CERS6	Q6ZMG9	384 aa		10.85	□□□□□ -0.67
CBWD1-222	ENST00000613508	ASB18	Q6ZVZ8	466 aa		10.85	□□□□□ -0.67
CBWD1-222	ENST00000613508	SYVN1	Q86TM6	617 aa		10.85	□□□□□ -0.67
CBWD1-222	ENST00000613508	TMEM135	Q86UB9	458 aa		10.85	□□□□□ -0.67
CBWD1-222	ENST00000613508	OOSP2	Q86WS3	158 aa		10.85	□□□□□ -0.67
CBWD1-222	ENST00000613508	CCDC50	Q8IVM0	306 aa		10.85	□□□□□ -0.67
CBWD1-222	ENST00000613508	SPDYE1	Q8NFV5	336 aa	Predicted RBP	10.85	□□□□□ -0.67
CBWD1-222	ENST00000613508	OR4K2	Q8NGD2	314 aa		10.85	□□□□□ -0.67
CBWD1-222	ENST00000613508	HEXDC	Q8WVB3	486 aa		10.85	□□□□□ -0.67
CBWD1-222	ENST00000613508	KRT35	Q92764	455 aa		10.85	□□□□□ -0.67
CBWD1-222	ENST00000613508	HAUS1	Q96CS2	278 aa		10.85	□□□□□ -0.67
CBWD1-222	ENST00000613508	ZNF501	Q96CX3	271 aa	Predicted RBP	10.85	□□□□□ -0.67
CBWD1-222	ENST00000613508	FICD	Q9BVA6	458 aa		10.85	□□□□□ -0.67
CBWD1-222	ENST00000613508	TSPY26P	Q9H489	355 aa		10.85	□□□□□ -0.67
CBWD1-222	ENST00000613508	ASB8	Q9H765	288 aa		10.85	□□□□□ -0.67
CBWD1-222	ENST00000613508	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	10.85	□□□□□ -0.67
CBWD1-222	ENST00000613508	ARNT2	Q9HBZ2	717 aa		10.85	□□□□□ -0.67
CBWD1-222	ENST00000613508	SYTL2	Q9HCH5	934 aa		10.85	□□□□□ -0.67
CBWD1-222	ENST00000613508	MLXIPL	Q9NP71	852 aa		10.85	□□□□□ -0.67
CBWD1-222	ENST00000613508	KCND1	Q9NSA2	647 aa		10.85	□□□□□ -0.67
CBWD1-222	ENST00000613508	ANKMY1	Q9P2S6	941 aa		10.85	□□□□□ -0.67
CBWD1-222	ENST00000613508	FEZ2	Q9UHY8	353 aa	Predicted RBP	10.85	□□□□□ -0.67
CBWD1-222	ENST00000613508	POMT2	Q9UKY4	750 aa		10.85	□□□□□ -0.67
CBWD1-222	ENST00000613508	MAN2B2	Q9Y2E5	1009 aa		10.85	□□□□□ -0.67
CBWD1-222	ENST00000613508	PCDHA3	Q9Y5H8	950 aa		10.85	□□□□□ -0.67
CBWD1-222	ENST00000613508	PCDHA13	Q9Y5I0	950 aa		10.85	□□□□□ -0.67
CBWD1-222	ENST00000613508	HEBP2	Q9Y5Z4	205 aa		10.85	□□□□□ -0.67
CBWD1-222	ENST00000613508	COLEC10	Q9Y6Z7	277 aa		10.85	□□□□□ -0.67
CBWD1-222	ENST00000613508	DOPEY2	Q9Y3R5	2298 aa		10.84	□□□□□ -0.67
CBWD1-222	ENST00000613508		F5H423	210 aa	Predicted RBP	10.84	□□□□□ -0.67
CBWD1-222	ENST00000613508		H7C0C1	242 aa		10.84	□□□□□ -0.67
CBWD1-222	ENST00000613508	PJA2	O43164	708 aa		10.84	□□□□□ -0.67
CBWD1-222	ENST00000613508	SCRG1	O75711	98 aa		10.84	□□□□□ -0.67
CBWD1-222	ENST00000613508	CRTAM	O95727	393 aa		10.84	□□□□□ -0.67
CBWD1-222	ENST00000613508	NTRK1	P04629	796 aa		10.84	□□□□□ -0.67
CBWD1-222	ENST00000613508	RALB	P11234	206 aa		10.84	□□□□□ -0.67
CBWD1-222	ENST00000613508	HADHA	P40939	763 aa		10.84	□□□□□ -0.67
CBWD1-222	ENST00000613508	ATP5O	P48047	213 aa		10.84	□□□□□ -0.67
CBWD1-222	ENST00000613508	ARL4D	P49703	201 aa		10.84	□□□□□ -0.67
CBWD1-222	ENST00000613508	KPNA2	P52292	529 aa	Known RBP	10.84	□□□□□ -0.67
CBWD1-222	ENST00000613508	GSDMD	P57764	484 aa		10.84	□□□□□ -0.67
CBWD1-222	ENST00000613508	RPS15	P62841	145 aa	Known RBP	10.84	□□□□□ -0.67
CBWD1-222	ENST00000613508	GPR33	Q49SQ1	333 aa		10.84	□□□□□ -0.67
CBWD1-222	ENST00000613508	TMTC4	Q5T4D3	741 aa		10.84	□□□□□ -0.67
CBWD1-222	ENST00000613508	PAPD7	Q5XG87	772 aa	Known RBP	10.84	□□□□□ -0.67
CBWD1-222	ENST00000613508	DENND5A	Q6IQ26	1287 aa		10.84	□□□□□ -0.67
CBWD1-222	ENST00000613508	DET1	Q7L5Y6	550 aa		10.84	□□□□□ -0.67
CBWD1-222	ENST00000613508	CDKL3	Q8IVW4	592 aa	Predicted RBP	10.84	□□□□□ -0.67
CBWD1-222	ENST00000613508	NXPE1	Q8N323	547 aa		10.84	□□□□□ -0.67
CBWD1-222	ENST00000613508	TEX19	Q8NA77	164 aa		10.84	□□□□□ -0.67
CBWD1-222	ENST00000613508	SLC38A9	Q8NBW4	561 aa		10.84	□□□□□ -0.67
CBWD1-222	ENST00000613508	ACVR1C	Q8NER5	493 aa		10.84	□□□□□ -0.67
CBWD1-222	ENST00000613508	ACTL9	Q8TC94	416 aa		10.84	□□□□□ -0.67
CBWD1-222	ENST00000613508	HM13	Q8TCT9	377 aa		10.84	□□□□□ -0.67
CBWD1-222	ENST00000613508	ULK4	Q96C45	1275 aa		10.84	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms