RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 ALPK1Q96QP1 1244 aa16.26■□□□□ 0.19
CNOT3-208ENST00000613073 GSTO2Q9H4Y5 243 aa16.26■□□□□ 0.19
CNOT3-208ENST00000613073 FANCEQ9HB96 536 aa16.26■□□□□ 0.19
CNOT3-208ENST00000613073 EGFL7Q9UHF1 273 aa16.26■□□□□ 0.19
CNOT3-208ENST00000613073 MED16Q9Y2X0 877 aa16.26■□□□□ 0.19
CNOT3-208ENST00000613073 OR51B4Q9Y5P0 310 aa16.26■□□□□ 0.19
CNOT3-208ENST00000613073 PPP6CO00743 305 aa16.25■□□□□ 0.19
CNOT3-208ENST00000613073 SDHDO14521 159 aa16.25■□□□□ 0.19
CNOT3-208ENST00000613073 PFDN6O15212 129 aa16.25■□□□□ 0.19
CNOT3-208ENST00000613073 GMNNO75496 209 aa16.25■□□□□ 0.19
CNOT3-208ENST00000613073 IMPDH1P20839 514 aa16.25■□□□□ 0.19
CNOT3-208ENST00000613073 EEF1DP29692 281 aaKnown RBP16.25■□□□□ 0.19
CNOT3-208ENST00000613073 RFC2P35250 354 aa16.25■□□□□ 0.19
CNOT3-208ENST00000613073 HK2P52789 917 aa16.25■□□□□ 0.19
CNOT3-208ENST00000613073 MAPK11Q15759 364 aa16.25■□□□□ 0.19
CNOT3-208ENST00000613073 TBCELQ5QJ74 424 aa16.25■□□□□ 0.19
CNOT3-208ENST00000613073 Q6ZNB5 142 aa16.25■□□□□ 0.19
CNOT3-208ENST00000613073 SLC22A9Q8IVM8 553 aa16.25■□□□□ 0.19
CNOT3-208ENST00000613073 PTGR2Q8N8N7 351 aaPredicted RBP16.25■□□□□ 0.19
CNOT3-208ENST00000613073 MRPS31Q92665 395 aaKnown RBP16.25■□□□□ 0.19
CNOT3-208ENST00000613073 DOK1Q99704 481 aa16.25■□□□□ 0.19
CNOT3-208ENST00000613073 NANOGQ9H9S0 305 aa16.25■□□□□ 0.19
CNOT3-208ENST00000613073 EML4Q9HC35 981 aaKnown RBP16.25■□□□□ 0.19
CNOT3-208ENST00000613073 SUCOQ9UBS9 1254 aaKnown RBP16.25■□□□□ 0.19
CNOT3-208ENST00000613073 MYO1DO94832 1006 aa16.25■□□□□ 0.19
CNOT3-208ENST00000613073 LRG1P02750 347 aa16.25■□□□□ 0.19
CNOT3-208ENST00000613073 ATP6V1B2P21281 511 aa16.25■□□□□ 0.19
CNOT3-208ENST00000613073 MYF6P23409 242 aa16.25■□□□□ 0.19
CNOT3-208ENST00000613073 HOXD11P31277 338 aaPredicted RBP16.25■□□□□ 0.19
CNOT3-208ENST00000613073 RAD23AP54725 363 aa16.25■□□□□ 0.19
CNOT3-208ENST00000613073 PPP1R3AQ16821 1122 aa16.25■□□□□ 0.19
CNOT3-208ENST00000613073 AGKQ53H12 422 aa16.25■□□□□ 0.19
CNOT3-208ENST00000613073 SETMARQ53H47 684 aaPredicted RBP16.25■□□□□ 0.19
CNOT3-208ENST00000613073 ZNF678Q5SXM1 525 aa16.25■□□□□ 0.19
CNOT3-208ENST00000613073 ALG14Q96F25 216 aa16.25■□□□□ 0.19
CNOT3-208ENST00000613073 GPR21Q99679 349 aa16.25■□□□□ 0.19
CNOT3-208ENST00000613073 SLC30A3Q99726 388 aa16.25■□□□□ 0.19
CNOT3-208ENST00000613073 INTS10Q9NVR2 710 aaKnown RBP16.25■□□□□ 0.19
CNOT3-208ENST00000613073 IKZF3Q9UKT9 509 aa16.25■□□□□ 0.19
CNOT3-208ENST00000613073 RIMKLBQ9ULI2 386 aa16.25■□□□□ 0.19
CNOT3-208ENST00000613073 PLXNA4Q9HCM2 1894 aa16.24■□□□□ 0.19
CNOT3-208ENST00000613073 ATP6AP2A0A1C7CYW4 349 aa16.24■□□□□ 0.19
CNOT3-208ENST00000613073 LILRB3O75022 631 aa16.24■□□□□ 0.19
CNOT3-208ENST00000613073 ATP6AP2O75787 350 aa16.24■□□□□ 0.19
CNOT3-208ENST00000613073 CLPXO76031 633 aa16.24■□□□□ 0.19
CNOT3-208ENST00000613073 MT-ND1P03886 318 aa16.24■□□□□ 0.19
CNOT3-208ENST00000613073 S100BP04271 92 aaPredicted RBP16.24■□□□□ 0.19
CNOT3-208ENST00000613073 CES1P23141 567 aa16.24■□□□□ 0.19
CNOT3-208ENST00000613073 HPCAL1P37235 193 aa16.24■□□□□ 0.19
CNOT3-208ENST00000613073 SLC26A3P40879 764 aa16.24■□□□□ 0.19
CNOT3-208ENST00000613073 SLC7A2P52569 658 aa16.24■□□□□ 0.19
CNOT3-208ENST00000613073 OXA1LQ15070 435 aa16.24■□□□□ 0.19
CNOT3-208ENST00000613073 C6orf10Q5SRN2 563 aa16.24■□□□□ 0.19
CNOT3-208ENST00000613073 TAS2R42Q7RTR8 314 aa16.24■□□□□ 0.19
CNOT3-208ENST00000613073 OR9I1Q8NGQ6 314 aa16.24■□□□□ 0.19
CNOT3-208ENST00000613073 ZNF385DQ9H6B1 395 aa16.24■□□□□ 0.19
CNOT3-208ENST00000613073 TAS2R13Q9NYV9 303 aa16.24■□□□□ 0.19
CNOT3-208ENST00000613073 EVLQ9UI08 416 aaPredicted RBP16.24■□□□□ 0.19
CNOT3-208ENST00000613073 OAZ3Q9UMX2 235 aa16.24■□□□□ 0.19
CNOT3-208ENST00000613073 TRIM64CA6NLI5 447 aa16.24■□□□□ 0.19
CNOT3-208ENST00000613073 TRPC5OSA6NMA1 111 aa16.24■□□□□ 0.19
CNOT3-208ENST00000613073 A8MX80 341 aa16.24■□□□□ 0.19
CNOT3-208ENST00000613073 PSMD11O00231 422 aa16.24■□□□□ 0.19
CNOT3-208ENST00000613073 NIPSNAP2O75323 286 aa16.24■□□□□ 0.19
CNOT3-208ENST00000613073 OLFM2O95897 454 aa16.24■□□□□ 0.19
CNOT3-208ENST00000613073 TIGD2Q4W5G0 525 aa16.24■□□□□ 0.19
CNOT3-208ENST00000613073 UNC50Q53HI1 259 aa16.24■□□□□ 0.19
CNOT3-208ENST00000613073 INO80DQ53TQ3 878 aaPredicted RBP16.24■□□□□ 0.19
CNOT3-208ENST00000613073 REP15Q6BDI9 236 aa16.24■□□□□ 0.19
CNOT3-208ENST00000613073 VASH1Q7L8A9 365 aaPredicted RBP16.24■□□□□ 0.19
CNOT3-208ENST00000613073 DHFR2Q86XF0 187 aa16.24■□□□□ 0.19
CNOT3-208ENST00000613073 CPSF7Q8N684 471 aaKnown RBP16.24■□□□□ 0.19
CNOT3-208ENST00000613073 SLC22A17Q8WUG5 538 aa16.24■□□□□ 0.19
CNOT3-208ENST00000613073 EID2BQ96D98 161 aa16.24■□□□□ 0.19
CNOT3-208ENST00000613073 C1orf50Q9BV19 199 aa16.24■□□□□ 0.19
CNOT3-208ENST00000613073 TNKS2Q9H2K2 1166 aa16.24■□□□□ 0.19
CNOT3-208ENST00000613073 SARS2Q9NP81 518 aaKnown RBP16.24■□□□□ 0.19
CNOT3-208ENST00000613073 CACNA2D2Q9NY47 1150 aa16.24■□□□□ 0.19
CNOT3-208ENST00000613073 TSR3Q9UJK0 312 aaKnown RBP16.24■□□□□ 0.19
CNOT3-208ENST00000613073 LSM7Q9UK45 103 aaKnown RBP16.24■□□□□ 0.19
CNOT3-208ENST00000613073 RANBP2P49792 3224 aaKnown RBP16.23■□□□□ 0.19
CNOT3-208ENST00000613073 TCRBV3S1A0A5B6 114 aa16.23■□□□□ 0.19
CNOT3-208ENST00000613073 NCF1BA6NI72 391 aaPredicted RBP16.23■□□□□ 0.19
CNOT3-208ENST00000613073 NCF1CA8MVU1 366 aaPredicted RBP16.23■□□□□ 0.19
CNOT3-208ENST00000613073 FAM47E-STBD1D6RA91 191 aa16.23■□□□□ 0.19
CNOT3-208ENST00000613073 EI24O14681 340 aa16.23■□□□□ 0.19
CNOT3-208ENST00000613073 BNIP3LO60238 219 aa16.23■□□□□ 0.19
CNOT3-208ENST00000613073 CLASP2O75122 1294 aaKnown RBP16.23■□□□□ 0.19
CNOT3-208ENST00000613073 CXCL14O95715 111 aa16.23■□□□□ 0.19
CNOT3-208ENST00000613073 C8AP07357 584 aa16.23■□□□□ 0.19
CNOT3-208ENST00000613073 GFAPP14136 432 aa16.23■□□□□ 0.19
CNOT3-208ENST00000613073 NCF1P14598 390 aaPredicted RBP16.23■□□□□ 0.19
CNOT3-208ENST00000613073 SMUG1Q53HV7 270 aa16.23■□□□□ 0.19
CNOT3-208ENST00000613073 SIDT2Q8NBJ9 832 aaKnown RBP16.23■□□□□ 0.19
CNOT3-208ENST00000613073 CAPSLQ8WWF8 208 aa16.23■□□□□ 0.19
CNOT3-208ENST00000613073 SGCDQ92629 289 aa16.23■□□□□ 0.19
CNOT3-208ENST00000613073 NSUN5Q96P11 429 aaKnown RBP16.23■□□□□ 0.19
CNOT3-208ENST00000613073 GPR63Q9BZJ6 419 aa16.23■□□□□ 0.19
CNOT3-208ENST00000613073 TRIM8Q9BZR9 551 aa16.23■□□□□ 0.19
CNOT3-208ENST00000613073 ZBP1Q9H171 429 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms