RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 SKIV2LQ15477 1246 aaKnown RBP8.77□□□□□ -1.01
CCDC47-207ENST00000612558 CCDC85BQ15834 202 aaPredicted RBP8.77□□□□□ -1.01
CCDC47-207ENST00000612558 ACSBG2Q5FVE4 666 aa8.77□□□□□ -1.01
CCDC47-207ENST00000612558 EPGNQ6UW88 154 aa8.77□□□□□ -1.01
CCDC47-207ENST00000612558 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.77□□□□□ -1.01
CCDC47-207ENST00000612558 CYHR1Q6ZMK1 362 aa8.77□□□□□ -1.01
CCDC47-207ENST00000612558 FRMD7Q6ZUT3 714 aa8.77□□□□□ -1.01
CCDC47-207ENST00000612558 DET1Q7L5Y6 550 aa8.77□□□□□ -1.01
CCDC47-207ENST00000612558 MAVSQ7Z434 540 aa8.77□□□□□ -1.01
CCDC47-207ENST00000612558 HDDC3Q8N4P3 179 aa8.77□□□□□ -1.01
CCDC47-207ENST00000612558 AADATQ8N5Z0 425 aa8.77□□□□□ -1.01
CCDC47-207ENST00000612558 IL17RCQ8NAC3 791 aa8.77□□□□□ -1.01
CCDC47-207ENST00000612558 SKA1Q96BD8 255 aa8.77□□□□□ -1.01
CCDC47-207ENST00000612558 ERLEC1Q96DZ1 483 aa8.77□□□□□ -1.01
CCDC47-207ENST00000612558 RILPQ96NA2 401 aa8.77□□□□□ -1.01
CCDC47-207ENST00000612558 EBF4Q9BQW3 602 aa8.77□□□□□ -1.01
CCDC47-207ENST00000612558 C1QTNF3Q9BXJ4 246 aa8.77□□□□□ -1.01
CCDC47-207ENST00000612558 FAM126AQ9BYI3 521 aaPredicted RBP8.77□□□□□ -1.01
CCDC47-207ENST00000612558 MYLK2Q9H1R3 596 aa8.77□□□□□ -1.01
CCDC47-207ENST00000612558 GSTO2Q9H4Y5 243 aa8.77□□□□□ -1.01
CCDC47-207ENST00000612558 COG4Q9H9E3 785 aa8.77□□□□□ -1.01
CCDC47-207ENST00000612558 ACTR5Q9H9F9 607 aaPredicted RBP8.77□□□□□ -1.01
CCDC47-207ENST00000612558 ZDHHC2Q9UIJ5 367 aa8.77□□□□□ -1.01
CCDC47-207ENST00000612558 APOBEC2Q9Y235 224 aaKnown RBP8.77□□□□□ -1.01
CCDC47-207ENST00000612558 COQ6Q9Y2Z9 468 aa8.77□□□□□ -1.01
CCDC47-207ENST00000612558 SOX1O00570 391 aaPredicted RBP8.76□□□□□ -1.01
CCDC47-207ENST00000612558 SGTAO43765 313 aa8.76□□□□□ -1.01
CCDC47-207ENST00000612558 CCDC22O60826 627 aa8.76□□□□□ -1.01
CCDC47-207ENST00000612558 SOD1P00441 154 aa8.76□□□□□ -1.01
CCDC47-207ENST00000612558 SERPINA6P08185 405 aa8.76□□□□□ -1.01
CCDC47-207ENST00000612558 GPR1P46091 355 aa8.76□□□□□ -1.01
CCDC47-207ENST00000612558 SCTRP47872 440 aa8.76□□□□□ -1.01
CCDC47-207ENST00000612558 IDH3AP50213 366 aa8.76□□□□□ -1.01
CCDC47-207ENST00000612558 HK3P52790 923 aa8.76□□□□□ -1.01
CCDC47-207ENST00000612558 COPAP53621 1224 aa8.76□□□□□ -1.01
CCDC47-207ENST00000612558 ALDH18A1P54886 795 aaKnown RBP8.76□□□□□ -1.01
CCDC47-207ENST00000612558 RPS14P62263 151 aaKnown RBP8.76□□□□□ -1.01
CCDC47-207ENST00000612558 TMEM115Q12893 351 aaPredicted RBP8.76□□□□□ -1.01
CCDC47-207ENST00000612558 GBX1Q14549 363 aa8.76□□□□□ -1.01
CCDC47-207ENST00000612558 TGFBIQ15582 683 aa8.76□□□□□ -1.01
CCDC47-207ENST00000612558 KHDC1Q4VXA5 237 aaKnown RBP8.76□□□□□ -1.01
CCDC47-207ENST00000612558 PLEKHS1Q5SXH7 462 aa8.76□□□□□ -1.01
CCDC47-207ENST00000612558 AGBL4Q5VU57 503 aa8.76□□□□□ -1.01
CCDC47-207ENST00000612558 SEL1L3Q68CR1 1132 aa8.76□□□□□ -1.01
CCDC47-207ENST00000612558 ANKS6Q68DC2 871 aa8.76□□□□□ -1.01
CCDC47-207ENST00000612558 RAET1GQ6H3X3 334 aa8.76□□□□□ -1.01
CCDC47-207ENST00000612558 KIAA1211LQ6NV74 962 aa8.76□□□□□ -1.01
CCDC47-207ENST00000612558 SBSNQ6UWP8 590 aa8.76□□□□□ -1.01
CCDC47-207ENST00000612558 FRA10AC1Q70Z53 315 aa8.76□□□□□ -1.01
CCDC47-207ENST00000612558 CLNKQ7Z7G1 428 aa8.76□□□□□ -1.01
CCDC47-207ENST00000612558 CUZD1Q86UP6 607 aa8.76□□□□□ -1.01
CCDC47-207ENST00000612558 PHYKPLQ8IUZ5 450 aa8.76□□□□□ -1.01
CCDC47-207ENST00000612558 AFAP1L2Q8N4X5 818 aa8.76□□□□□ -1.01
CCDC47-207ENST00000612558 AGR3Q8TD06 166 aa8.76□□□□□ -1.01
CCDC47-207ENST00000612558 STON2Q8WXE9 905 aa8.76□□□□□ -1.01
CCDC47-207ENST00000612558 MSANTD3Q96H12 275 aa8.76□□□□□ -1.01
CCDC47-207ENST00000612558 FAR2Q96K12 515 aa8.76□□□□□ -1.01
CCDC47-207ENST00000612558 SHCBP1LQ9BZQ2 653 aa8.76□□□□□ -1.01
CCDC47-207ENST00000612558 ZCCHC2Q9C0B9 1178 aaKnown RBP8.76□□□□□ -1.01
CCDC47-207ENST00000612558 EPHX3Q9H6B9 360 aa8.76□□□□□ -1.01
CCDC47-207ENST00000612558 POLMQ9NP87 494 aaPredicted RBP8.76□□□□□ -1.01
CCDC47-207ENST00000612558 NUDT4Q9NZJ9 180 aa8.76□□□□□ -1.01
CCDC47-207ENST00000612558 CD274Q9NZQ7 290 aa8.76□□□□□ -1.01
CCDC47-207ENST00000612558 MBD1Q9UIS9 605 aaPredicted RBP8.76□□□□□ -1.01
CCDC47-207ENST00000612558 CNOT6Q9ULM6 557 aaKnown RBP8.76□□□□□ -1.01
CCDC47-207ENST00000612558 SLC12A4Q9UP95 1085 aa8.76□□□□□ -1.01
CCDC47-207ENST00000612558 SORCS3Q9UPU3 1222 aa8.76□□□□□ -1.01
CCDC47-207ENST00000612558 RRP15Q9Y3B9 282 aaKnown RBP8.76□□□□□ -1.01
CCDC47-207ENST00000612558 UNC80Q8N2C7 3258 aa8.75□□□□□ -1.01
CCDC47-207ENST00000612558 A0A1W2PP55 124 aa8.75□□□□□ -1.01
CCDC47-207ENST00000612558 NCF1BA6NI72 391 aaPredicted RBP8.75□□□□□ -1.01
CCDC47-207ENST00000612558 NCF1CA8MVU1 366 aaPredicted RBP8.75□□□□□ -1.01
CCDC47-207ENST00000612558 ANKRD65E5RJM6 399 aa8.75□□□□□ -1.01
CCDC47-207ENST00000612558 FCHO1O14526 889 aa8.75□□□□□ -1.01
CCDC47-207ENST00000612558 RAD51BO15315 384 aa8.75□□□□□ -1.01
CCDC47-207ENST00000612558 INPP4BO15327 924 aa8.75□□□□□ -1.01
CCDC47-207ENST00000612558 FFAR2O15552 330 aa8.75□□□□□ -1.01
CCDC47-207ENST00000612558 GRID2O43424 1007 aa8.75□□□□□ -1.01
CCDC47-207ENST00000612558 NUAK1O60285 661 aa8.75□□□□□ -1.01
CCDC47-207ENST00000612558 DIAPH2O60879 1101 aa8.75□□□□□ -1.01
CCDC47-207ENST00000612558 ADAM23O75077 832 aa8.75□□□□□ -1.01
CCDC47-207ENST00000612558 RNASEH2AO75792 299 aaKnown RBP8.75□□□□□ -1.01
CCDC47-207ENST00000612558 ATP5HO75947 161 aa8.75□□□□□ -1.01
CCDC47-207ENST00000612558 TM7SF2O76062 418 aa8.75□□□□□ -1.01
CCDC47-207ENST00000612558 PCDH8O95206 1070 aa8.75□□□□□ -1.01
CCDC47-207ENST00000612558 SIX3O95343 332 aaPredicted RBP8.75□□□□□ -1.01
CCDC47-207ENST00000612558 KLF8O95600 359 aaPredicted RBP8.75□□□□□ -1.01
CCDC47-207ENST00000612558 DNTTP04053 509 aa8.75□□□□□ -1.01
CCDC47-207ENST00000612558 S100BP04271 92 aaPredicted RBP8.75□□□□□ -1.01
CCDC47-207ENST00000612558 MPC1LP0DKB6 136 aa8.75□□□□□ -1.01
CCDC47-207ENST00000612558 NCF1P14598 390 aaPredicted RBP8.75□□□□□ -1.01
CCDC47-207ENST00000612558 HOXB2P14652 356 aa8.75□□□□□ -1.01
CCDC47-207ENST00000612558 EEF1DP29692 281 aaKnown RBP8.75□□□□□ -1.01
CCDC47-207ENST00000612558 CORO7P57737 925 aa8.75□□□□□ -1.01
CCDC47-207ENST00000612558 TAS2R38P59533 333 aa8.75□□□□□ -1.01
CCDC47-207ENST00000612558 HSPA14Q0VDF9 509 aa8.75□□□□□ -1.01
CCDC47-207ENST00000612558 TUBB3Q13509 450 aa8.75□□□□□ -1.01
CCDC47-207ENST00000612558 SMAD2Q15796 467 aaKnown RBP8.75□□□□□ -1.01
CCDC47-207ENST00000612558 SPRED3Q2MJR0 410 aa8.75□□□□□ -1.01
CCDC47-207ENST00000612558 FBXO43Q4G163 708 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms