RNA–Protein interactions for RNA: ENST00000611717.4

PPP4R3B-203, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PPP4R3B, Length 5,243 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-203ENST00000611717 DLDP09622 509 aaKnown RBP12.92□□□□□ -0.34
PPP4R3B-203ENST00000611717 CBSLP0DN79 551 aa12.92□□□□□ -0.34
PPP4R3B-203ENST00000611717 NT5EP21589 574 aa12.92□□□□□ -0.34
PPP4R3B-203ENST00000611717 CBSP35520 551 aa12.92□□□□□ -0.34
PPP4R3B-203ENST00000611717 RPL4P36578 427 aaKnown RBP12.92□□□□□ -0.34
PPP4R3B-203ENST00000611717 B3GNT9Q6UX72 402 aa12.92□□□□□ -0.34
PPP4R3B-203ENST00000611717 ARHGAP36Q6ZRI8 547 aa12.92□□□□□ -0.34
PPP4R3B-203ENST00000611717 PTPN18Q99952 460 aa12.92□□□□□ -0.34
PPP4R3B-203ENST00000611717 PAAF1Q9BRP4 392 aa12.92□□□□□ -0.34
PPP4R3B-203ENST00000611717 MRM3Q9HC36 420 aaKnown RBP12.92□□□□□ -0.34
PPP4R3B-203ENST00000611717 CLN6Q9NWW5 311 aa12.92□□□□□ -0.34
PPP4R3B-203ENST00000611717 C15orf41Q9Y2V0 281 aa12.92□□□□□ -0.34
PPP4R3B-203ENST00000611717 GMPPBQ9Y5P6 360 aa12.92□□□□□ -0.34
PPP4R3B-203ENST00000611717 GLI3P10071 1580 aa12.92□□□□□ -0.34
PPP4R3B-203ENST00000611717 PIP5K1BO14986 540 aa12.92□□□□□ -0.34
PPP4R3B-203ENST00000611717 BEST1O76090 585 aa12.92□□□□□ -0.34
PPP4R3B-203ENST00000611717 HEPACAMQ14CZ8 416 aa12.92□□□□□ -0.34
PPP4R3B-203ENST00000611717 TAF13Q15543 124 aa12.92□□□□□ -0.34
PPP4R3B-203ENST00000611717 RTP2Q5QGT7 225 aa12.92□□□□□ -0.34
PPP4R3B-203ENST00000611717 GCNT6Q5T4J0 391 aa12.92□□□□□ -0.34
PPP4R3B-203ENST00000611717 C14orf80Q86SX3 495 aa12.92□□□□□ -0.34
PPP4R3B-203ENST00000611717 TTLQ8NG68 377 aa12.92□□□□□ -0.34
PPP4R3B-203ENST00000611717 CEP295NLQ96MC4 621 aa12.92□□□□□ -0.34
PPP4R3B-203ENST00000611717 SLITRK2Q9H156 845 aa12.92□□□□□ -0.34
PPP4R3B-203ENST00000611717 USP29Q9HBJ7 922 aa12.92□□□□□ -0.34
PPP4R3B-203ENST00000611717 EQTNQ9NQ60 294 aa12.92□□□□□ -0.34
PPP4R3B-203ENST00000611717 SPHK2Q9NRA0 654 aa12.92□□□□□ -0.34
PPP4R3B-203ENST00000611717 ADGRE2Q9UHX3 823 aa12.92□□□□□ -0.34
PPP4R3B-203ENST00000611717 RUVBL1Q9Y265 456 aaKnown RBP12.92□□□□□ -0.34
PPP4R3B-203ENST00000611717 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.91□□□□□ -0.34
PPP4R3B-203ENST00000611717 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.91□□□□□ -0.34
PPP4R3B-203ENST00000611717 TEX28O15482 410 aa12.91□□□□□ -0.34
PPP4R3B-203ENST00000611717 TNFP01375 233 aa12.91□□□□□ -0.34
PPP4R3B-203ENST00000611717 ANPEPP15144 967 aa12.91□□□□□ -0.34
PPP4R3B-203ENST00000611717 SERPINB1P30740 379 aa12.91□□□□□ -0.34
PPP4R3B-203ENST00000611717 BMPR1AP36894 532 aa12.91□□□□□ -0.34
PPP4R3B-203ENST00000611717 HERVK_113P63132 956 aa12.91□□□□□ -0.34
PPP4R3B-203ENST00000611717 RFX4Q33E94 735 aa12.91□□□□□ -0.34
PPP4R3B-203ENST00000611717 PLEKHG6Q3KR16 790 aa12.91□□□□□ -0.34
PPP4R3B-203ENST00000611717 LRRC66Q68CR7 880 aa12.91□□□□□ -0.34
PPP4R3B-203ENST00000611717 GALNT18Q6P9A2 607 aa12.91□□□□□ -0.34
PPP4R3B-203ENST00000611717 LIX1Q8N485 282 aa12.91□□□□□ -0.34
PPP4R3B-203ENST00000611717 TSGA13Q96PP4 275 aa12.91□□□□□ -0.34
PPP4R3B-203ENST00000611717 ERVK-6Q9BXR3 956 aa12.91□□□□□ -0.34
PPP4R3B-203ENST00000611717 ELOVL2Q9NXB9 296 aa12.91□□□□□ -0.34
PPP4R3B-203ENST00000611717 ZNF840PA6NDX5 716 aa12.91□□□□□ -0.34
PPP4R3B-203ENST00000611717 TPP2P29144 1249 aaPredicted RBP12.91□□□□□ -0.34
PPP4R3B-203ENST00000611717 TAS2R41P59536 307 aa12.91□□□□□ -0.34
PPP4R3B-203ENST00000611717 INAQ16352 499 aa12.91□□□□□ -0.34
PPP4R3B-203ENST00000611717 VWA5B1Q5TIE3 1220 aa12.91□□□□□ -0.34
PPP4R3B-203ENST00000611717 RNFT2Q96EX2 444 aa12.91□□□□□ -0.34
PPP4R3B-203ENST00000611717 PPM1MQ96MI6 270 aa12.91□□□□□ -0.34
PPP4R3B-203ENST00000611717 HAPLN2Q9GZV7 340 aa12.91□□□□□ -0.34
PPP4R3B-203ENST00000611717 TCHHQ07283 1943 aa12.91□□□□□ -0.34
PPP4R3B-203ENST00000611717 EPOP01588 193 aa12.91□□□□□ -0.34
PPP4R3B-203ENST00000611717 IMPDH1P20839 514 aa12.91□□□□□ -0.34
PPP4R3B-203ENST00000611717 AP1S2P56377 157 aa12.91□□□□□ -0.34
PPP4R3B-203ENST00000611717 CLDN10P78369 228 aa12.91□□□□□ -0.34
PPP4R3B-203ENST00000611717 ZNF155Q12901 538 aaPredicted RBP12.91□□□□□ -0.34
PPP4R3B-203ENST00000611717 NEDD8Q15843 81 aa12.91□□□□□ -0.34
PPP4R3B-203ENST00000611717 CYP2U1Q7Z449 544 aa12.91□□□□□ -0.34
PPP4R3B-203ENST00000611717 SAMD14Q8IZD0 417 aaPredicted RBP12.91□□□□□ -0.34
PPP4R3B-203ENST00000611717 AVL9Q8NBF6 648 aa12.91□□□□□ -0.34
PPP4R3B-203ENST00000611717 ZNF248Q8NDW4 579 aa12.91□□□□□ -0.34
PPP4R3B-203ENST00000611717 FBXW2Q9UKT8 454 aa12.91□□□□□ -0.34
PPP4R3B-203ENST00000611717 IKZF3Q9UKT9 509 aa12.91□□□□□ -0.34
PPP4R3B-203ENST00000611717 LATS1O95835 1130 aa12.91□□□□□ -0.34
PPP4R3B-203ENST00000611717 AVPR1BP47901 424 aa12.91□□□□□ -0.34
PPP4R3B-203ENST00000611717 IRF9Q00978 393 aa12.91□□□□□ -0.34
PPP4R3B-203ENST00000611717 KRR1Q13601 381 aaKnown RBP12.91□□□□□ -0.34
PPP4R3B-203ENST00000611717 VPS26BQ4G0F5 336 aa12.91□□□□□ -0.34
PPP4R3B-203ENST00000611717 FGD2Q7Z6J4 655 aa12.91□□□□□ -0.34
PPP4R3B-203ENST00000611717 DCAKDQ8WVC6 231 aa12.91□□□□□ -0.34
PPP4R3B-203ENST00000611717 DEPDC7Q96QD5 511 aa12.91□□□□□ -0.34
PPP4R3B-203ENST00000611717 LTBP4Q8N2S1 1624 aa12.9□□□□□ -0.34
PPP4R3B-203ENST00000611717 C2orf71A6NGG8 1288 aa12.9□□□□□ -0.34
PPP4R3B-203ENST00000611717 MMP20O60882 483 aa12.9□□□□□ -0.34
PPP4R3B-203ENST00000611717 DNAJA2O60884 412 aa12.9□□□□□ -0.34
PPP4R3B-203ENST00000611717 ENTPD5O75356 428 aa12.9□□□□□ -0.34
PPP4R3B-203ENST00000611717 KRT36O76013 467 aa12.9□□□□□ -0.34
PPP4R3B-203ENST00000611717 TBC1D21Q8IYX1 336 aa12.9□□□□□ -0.34
PPP4R3B-203ENST00000611717 NRSN1Q8IZ57 195 aa12.9□□□□□ -0.34
PPP4R3B-203ENST00000611717 ANKLE1Q8NAG6 615 aa12.9□□□□□ -0.34
PPP4R3B-203ENST00000611717 ZCCHC10Q8TBK6 192 aa12.9□□□□□ -0.34
PPP4R3B-203ENST00000611717 ANKRD49Q8WVL7 239 aa12.9□□□□□ -0.34
PPP4R3B-203ENST00000611717 ZNF641Q96N77 438 aaPredicted RBP12.9□□□□□ -0.34
PPP4R3B-203ENST00000611717 TRAPPC9Q96Q05 1148 aa12.9□□□□□ -0.34
PPP4R3B-203ENST00000611717 SEC14L3Q9UDX4 400 aa12.9□□□□□ -0.34
PPP4R3B-203ENST00000611717 DDX60Q8IY21 1712 aaKnown RBP12.9□□□□□ -0.34
PPP4R3B-203ENST00000611717 NHSQ6T4R5 1651 aa12.9□□□□□ -0.34
PPP4R3B-203ENST00000611717 A0A0D9SEW6 157 aa12.9□□□□□ -0.34
PPP4R3B-203ENST00000611717 B3GALT2O43825 422 aa12.9□□□□□ -0.34
PPP4R3B-203ENST00000611717 SOCS5O75159 536 aa12.9□□□□□ -0.34
PPP4R3B-203ENST00000611717 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.9□□□□□ -0.344e-7■■■■□ 21.6
PPP4R3B-203ENST00000611717 GPRIN1Q7Z2K8 1008 aa12.9□□□□□ -0.34
PPP4R3B-203ENST00000611717 WDTC1Q8N5D0 677 aa12.9□□□□□ -0.34
PPP4R3B-203ENST00000611717 KBTBD7Q8WVZ9 684 aa12.9□□□□□ -0.34
PPP4R3B-203ENST00000611717 XAGE5Q8WWM1 108 aa12.9□□□□□ -0.34
PPP4R3B-203ENST00000611717 CENPIQ92674 756 aaPredicted RBP12.9□□□□□ -0.34
PPP4R3B-203ENST00000611717 SUCOQ9UBS9 1254 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms