RNA–Protein interactions for RNA: ENST00000608461.1

HDDC2-206, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-206ENST00000608461 TPRP12270 2363 aaKnown RBP13.97□□□□□ -0.17
HDDC2-206ENST00000608461 FREM2Q5SZK8 3169 aa13.97□□□□□ -0.17
HDDC2-206ENST00000608461 IGHV5-10-1A0A0J9YXX1 117 aa13.96□□□□□ -0.17
HDDC2-206ENST00000608461 FAM187AA6NFU0 413 aa13.96□□□□□ -0.17
HDDC2-206ENST00000608461 H3BMM5 538 aa13.96□□□□□ -0.17
HDDC2-206ENST00000608461 GOLGA8MH3BSY2 632 aa13.96□□□□□ -0.17
HDDC2-206ENST00000608461 PLD2O14939 933 aa13.96□□□□□ -0.17
HDDC2-206ENST00000608461 NDUFS3O75489 264 aa13.96□□□□□ -0.17
HDDC2-206ENST00000608461 ITGA2BP08514 1039 aa13.96□□□□□ -0.17
HDDC2-206ENST00000608461 THRAP10827 490 aa13.96□□□□□ -0.17
HDDC2-206ENST00000608461 ARNTP27540 789 aa13.96□□□□□ -0.17
HDDC2-206ENST00000608461 RBMS1P29558 406 aaKnown RBP13.96□□□□□ -0.17
HDDC2-206ENST00000608461 TERF1P54274 439 aa13.96□□□□□ -0.17
HDDC2-206ENST00000608461 CBLBQ13191 982 aa13.96□□□□□ -0.17
HDDC2-206ENST00000608461 TUBB2AQ13885 445 aa13.96□□□□□ -0.17
HDDC2-206ENST00000608461 GPR18Q14330 331 aa13.96□□□□□ -0.17
HDDC2-206ENST00000608461 ST3GAL2Q16842 350 aa13.96□□□□□ -0.17
HDDC2-206ENST00000608461 TYSND1Q2T9J0 566 aa13.96□□□□□ -0.17
HDDC2-206ENST00000608461 ANKRD20A4Q4UJ75 823 aa13.96□□□□□ -0.17
HDDC2-206ENST00000608461 XKR5Q6UX68 686 aa13.96□□□□□ -0.17
HDDC2-206ENST00000608461 ZNF574Q6ZN55 896 aaPredicted RBP13.96□□□□□ -0.17
HDDC2-206ENST00000608461 B3GNT8Q7Z7M8 397 aa13.96□□□□□ -0.17
HDDC2-206ENST00000608461 PDIK1LQ8N165 341 aa13.96□□□□□ -0.17
HDDC2-206ENST00000608461 FBXO39Q8N4B4 442 aa13.96□□□□□ -0.17
HDDC2-206ENST00000608461 MDM1Q8TC05 714 aa13.96□□□□□ -0.17
HDDC2-206ENST00000608461 CALML6Q8TD86 181 aa13.96□□□□□ -0.17
HDDC2-206ENST00000608461 ASZ1Q8WWH4 475 aa13.96□□□□□ -0.17
HDDC2-206ENST00000608461 FGF11Q92914 225 aa13.96□□□□□ -0.17
HDDC2-206ENST00000608461 TRIM44Q96DX7 344 aaPredicted RBP13.96□□□□□ -0.17
HDDC2-206ENST00000608461 CCDC97Q96F63 343 aaPredicted RBP13.96□□□□□ -0.17
HDDC2-206ENST00000608461 C12orf66Q96MD2 445 aa13.96□□□□□ -0.17
HDDC2-206ENST00000608461 PANX3Q96QZ0 392 aa13.96□□□□□ -0.17
HDDC2-206ENST00000608461 INSM2Q96T92 566 aaPredicted RBP13.96□□□□□ -0.17
HDDC2-206ENST00000608461 NUDT22Q9BRQ3 303 aa13.96□□□□□ -0.17
HDDC2-206ENST00000608461 TUBB2BQ9BVA1 445 aa13.96□□□□□ -0.17
HDDC2-206ENST00000608461 FOXP3Q9BZS1 431 aa13.96□□□□□ -0.17
HDDC2-206ENST00000608461 WWP1Q9H0M0 922 aa13.96□□□□□ -0.17
HDDC2-206ENST00000608461 OR52A5Q9H2C5 316 aa13.96□□□□□ -0.17
HDDC2-206ENST00000608461 MVB12BQ9H7P6 319 aa13.96□□□□□ -0.17
HDDC2-206ENST00000608461 THSD1Q9NS62 852 aa13.96□□□□□ -0.17
HDDC2-206ENST00000608461 EPHA6Q9UF33 1036 aa13.96□□□□□ -0.17
HDDC2-206ENST00000608461 GNPTGQ9UJJ9 305 aa13.96□□□□□ -0.17
HDDC2-206ENST00000608461 PSMD13Q9UNM6 376 aa13.96□□□□□ -0.17
HDDC2-206ENST00000608461 MN1Q10571 1320 aaPredicted RBP13.95□□□□□ -0.18
HDDC2-206ENST00000608461 WDFY3Q8IZQ1 3526 aa13.95□□□□□ -0.18
HDDC2-206ENST00000608461 ZCWPW2A0A1B0GU75 182 aa13.95□□□□□ -0.18
HDDC2-206ENST00000608461 CASC3O15234 703 aaKnown RBP13.95□□□□□ -0.18
HDDC2-206ENST00000608461 TTI1O43156 1089 aa13.95□□□□□ -0.18
HDDC2-206ENST00000608461 OR1I1O60431 355 aa13.95□□□□□ -0.18
HDDC2-206ENST00000608461 BRINP1O60477 761 aa13.95□□□□□ -0.18
HDDC2-206ENST00000608461 SEC31AO94979 1220 aaKnown RBP13.95□□□□□ -0.18
HDDC2-206ENST00000608461 C9P02748 559 aa13.95□□□□□ -0.18
HDDC2-206ENST00000608461 MPOP05164 745 aa13.95□□□□□ -0.18
HDDC2-206ENST00000608461 ANKRD34CP0C6C1 535 aa13.95□□□□□ -0.18
HDDC2-206ENST00000608461 AMD1P17707 334 aa13.95□□□□□ -0.18
HDDC2-206ENST00000608461 PGAM1P18669 254 aa13.95□□□□□ -0.18
HDDC2-206ENST00000608461 CFHR1Q03591 330 aa13.95□□□□□ -0.18
HDDC2-206ENST00000608461 CKAP4Q07065 602 aaKnown RBP13.95□□□□□ -0.18
HDDC2-206ENST00000608461 SEMA3AQ14563 771 aa13.95□□□□□ -0.18
HDDC2-206ENST00000608461 TBC1D25Q3MII6 688 aa13.95□□□□□ -0.18
HDDC2-206ENST00000608461 C3orf38Q5JPI3 329 aa13.95□□□□□ -0.18
HDDC2-206ENST00000608461 PHF19Q5T6S3 580 aa13.95□□□□□ -0.18
HDDC2-206ENST00000608461 NKAIN2Q5VXU1 208 aa13.95□□□□□ -0.18
HDDC2-206ENST00000608461 HIBCHQ6NVY1 386 aaPredicted RBP13.95□□□□□ -0.18
HDDC2-206ENST00000608461 NEPROQ6NW34 567 aa13.95□□□□□ -0.18
HDDC2-206ENST00000608461 TMPRSS9Q7Z410 1059 aa13.95□□□□□ -0.18
HDDC2-206ENST00000608461 AGBL5Q8NDL9 886 aa13.95□□□□□ -0.18
HDDC2-206ENST00000608461 SNIP1Q8TAD8 396 aaKnown RBP13.95□□□□□ -0.18
HDDC2-206ENST00000608461 NCSTNQ92542 709 aa13.95□□□□□ -0.18
HDDC2-206ENST00000608461 ELMO1Q92556 727 aa13.95□□□□□ -0.18
HDDC2-206ENST00000608461 STAMBPL1Q96FJ0 436 aa13.95□□□□□ -0.18
HDDC2-206ENST00000608461 ZDHHC12Q96GR4 267 aa13.95□□□□□ -0.18
HDDC2-206ENST00000608461 KRT12Q99456 494 aa13.95□□□□□ -0.18
HDDC2-206ENST00000608461 TBC1D10AQ9BXI6 508 aa13.95□□□□□ -0.18
HDDC2-206ENST00000608461 P2RY12Q9H244 342 aa13.95□□□□□ -0.18
HDDC2-206ENST00000608461 SEMA6CQ9H3T2 930 aa13.95□□□□□ -0.18
HDDC2-206ENST00000608461 KIR3DX1Q9H7L2 352 aa13.95□□□□□ -0.18
HDDC2-206ENST00000608461 IMP3Q9NV31 184 aaKnown RBP13.95□□□□□ -0.18
HDDC2-206ENST00000608461 INTS10Q9NVR2 710 aaKnown RBP13.95□□□□□ -0.18
HDDC2-206ENST00000608461 ZMIZ1Q9ULJ6 1067 aa13.95□□□□□ -0.18
HDDC2-206ENST00000608461 PCDHGA7Q9Y5G6 932 aa13.95□□□□□ -0.18
HDDC2-206ENST00000608461 MAD1L1Q9Y6D9 718 aa13.95□□□□□ -0.18
HDDC2-206ENST00000608461 PRSS21Q9Y6M0 314 aa13.95□□□□□ -0.18
HDDC2-206ENST00000608461 FAM169AQ9Y6X4 670 aa13.95□□□□□ -0.18
HDDC2-206ENST00000608461 DMXL2Q8TDJ6 3036 aa13.95□□□□□ -0.18
HDDC2-206ENST00000608461 SLC5A10A0PJK1 596 aa13.94□□□□□ -0.18
HDDC2-206ENST00000608461 EFCAB8A8MWE9 144 aa13.94□□□□□ -0.18
HDDC2-206ENST00000608461 CDRT15L2A8MXV6 281 aa13.94□□□□□ -0.18
HDDC2-206ENST00000608461 KDM1AO60341 852 aa13.94□□□□□ -0.18
HDDC2-206ENST00000608461 ESR1P03372 595 aa13.94□□□□□ -0.18
HDDC2-206ENST00000608461 JMJD7P0C870 316 aa13.94□□□□□ -0.18
HDDC2-206ENST00000608461 HOXB3P14651 431 aaPredicted RBP13.94□□□□□ -0.18
HDDC2-206ENST00000608461 CSF2RBP32927 897 aa13.94□□□□□ -0.18
HDDC2-206ENST00000608461 CSTF2P33240 577 aaKnown RBP eCLIP13.94□□□□□ -0.18
HDDC2-206ENST00000608461 CAPZBP47756 277 aa13.94□□□□□ -0.18
HDDC2-206ENST00000608461 PPM1FP49593 454 aaPredicted RBP13.94□□□□□ -0.18
HDDC2-206ENST00000608461 THOC5Q13769 683 aaKnown RBP13.94□□□□□ -0.18
HDDC2-206ENST00000608461 KRT33BQ14525 404 aa13.94□□□□□ -0.18
HDDC2-206ENST00000608461 LONRF1Q17RB8 773 aa13.94□□□□□ -0.18
HDDC2-206ENST00000608461 CES3Q6UWW8 571 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms