RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 TIPARPQ7Z3E1 657 aaKnown RBP18.85■□□□□ 0.61
SGMS1-208ENST00000608287 LRRTM4Q86VH4 590 aa18.85■□□□□ 0.61
SGMS1-208ENST00000608287 APLFQ8IW19 511 aaPredicted RBP18.85■□□□□ 0.61
SGMS1-208ENST00000608287 MAIP1Q8WWC4 291 aa18.85■□□□□ 0.61
SGMS1-208ENST00000608287 CTRCQ99895 268 aa18.85■□□□□ 0.61
SGMS1-208ENST00000608287 CASS4Q9NQ75 786 aa18.85■□□□□ 0.61
SGMS1-208ENST00000608287 KLC4Q9NSK0 619 aa18.85■□□□□ 0.61
SGMS1-208ENST00000608287 TBC1D29Q9UFV1 150 aa18.85■□□□□ 0.61
SGMS1-208ENST00000608287 FKBPLQ9UIM3 349 aa18.85■□□□□ 0.61
SGMS1-208ENST00000608287 TLK1Q9UKI8 766 aa18.85■□□□□ 0.61
SGMS1-208ENST00000608287 MAP4K5Q9Y4K4 846 aa18.85■□□□□ 0.61
SGMS1-208ENST00000608287 GAPDHSO14556 408 aaPredicted RBP18.84■□□□□ 0.61
SGMS1-208ENST00000608287 CHUKO15111 745 aa18.84■□□□□ 0.61
SGMS1-208ENST00000608287 KMOO15229 486 aa18.84■□□□□ 0.61
SGMS1-208ENST00000608287 PRAMEF1O95521 474 aa18.84■□□□□ 0.61
SGMS1-208ENST00000608287 AP2A1O95782 977 aa18.84■□□□□ 0.61
SGMS1-208ENST00000608287 EML2O95834 649 aa18.84■□□□□ 0.61
SGMS1-208ENST00000608287 TPH1P17752 444 aa18.84■□□□□ 0.61
SGMS1-208ENST00000608287 TMPRSS15P98073 1019 aa18.84■□□□□ 0.61
SGMS1-208ENST00000608287 TMEM115Q12893 351 aaPredicted RBP18.84■□□□□ 0.61
SGMS1-208ENST00000608287 MSLNQ13421 630 aaPredicted RBP18.84■□□□□ 0.61
SGMS1-208ENST00000608287 SIX1Q15475 284 aaPredicted RBP18.84■□□□□ 0.61
SGMS1-208ENST00000608287 CCNG2Q16589 344 aa18.84■□□□□ 0.61
SGMS1-208ENST00000608287 LONRF2Q1L5Z9 754 aa18.84■□□□□ 0.61
SGMS1-208ENST00000608287 LDLRAP1Q5SW96 308 aa18.84■□□□□ 0.61
SGMS1-208ENST00000608287 ATP1A1-AS1Q5TC04 95 aa18.84■□□□□ 0.61
SGMS1-208ENST00000608287 ARHGAP22Q7Z5H3 698 aa18.84■□□□□ 0.61
SGMS1-208ENST00000608287 SLC34A3Q8N130 599 aa18.84■□□□□ 0.61
SGMS1-208ENST00000608287 CCDC89Q8N998 374 aa18.84■□□□□ 0.61
SGMS1-208ENST00000608287 OR13C4Q8NGS5 318 aa18.84■□□□□ 0.61
SGMS1-208ENST00000608287 ZNF398Q8TD17 642 aa18.84■□□□□ 0.61
SGMS1-208ENST00000608287 SH3KBP1Q96B97 665 aa18.84■□□□□ 0.61
SGMS1-208ENST00000608287 OSGEPL1Q9H4B0 414 aa18.84■□□□□ 0.61
SGMS1-208ENST00000608287 EPB41L1Q9H4G0 881 aa18.84■□□□□ 0.61
SGMS1-208ENST00000608287 TMEM9Q9P0T7 183 aa18.84■□□□□ 0.61
SGMS1-208ENST00000608287 ZNF106Q9H2Y7 1883 aaKnown RBP18.84■□□□□ 0.61
SGMS1-208ENST00000608287 E7EVH7 732 aa18.83■□□□□ 0.6
SGMS1-208ENST00000608287 ZSCAN12O43309 604 aa18.83■□□□□ 0.6
SGMS1-208ENST00000608287 ETS1P14921 441 aa18.83■□□□□ 0.6
SGMS1-208ENST00000608287 ZNF7P17097 686 aaPredicted RBP18.83■□□□□ 0.6
SGMS1-208ENST00000608287 CA5AP35218 305 aa18.83■□□□□ 0.6
SGMS1-208ENST00000608287 FDFT1P37268 417 aa18.83■□□□□ 0.6
SGMS1-208ENST00000608287 LMAN1P49257 510 aa18.83■□□□□ 0.6
SGMS1-208ENST00000608287 PGDP52209 483 aa18.83■□□□□ 0.6
SGMS1-208ENST00000608287 ERV3-1Q14264 604 aa18.83■□□□□ 0.6
SGMS1-208ENST00000608287 SNAP47Q5SQN1 464 aa18.83■□□□□ 0.6
SGMS1-208ENST00000608287 GPRC6AQ5T6X5 926 aa18.83■□□□□ 0.6
SGMS1-208ENST00000608287 CYB5D1Q6P9G0 228 aa18.83■□□□□ 0.6
SGMS1-208ENST00000608287 PRUNE1Q86TP1 453 aa18.83■□□□□ 0.6
SGMS1-208ENST00000608287 TRAPPC5Q8IUR0 188 aa18.83■□□□□ 0.6
SGMS1-208ENST00000608287 SLC37A2Q8TED4 501 aa18.83■□□□□ 0.6
SGMS1-208ENST00000608287 ULBP3Q9BZM4 244 aa18.83■□□□□ 0.6
SGMS1-208ENST00000608287 ZCCHC2Q9C0B9 1178 aaKnown RBP18.83■□□□□ 0.6
SGMS1-208ENST00000608287 KCNF1Q9H3M0 494 aa18.83■□□□□ 0.6
SGMS1-208ENST00000608287 ASB8Q9H765 288 aa18.83■□□□□ 0.6
SGMS1-208ENST00000608287 ETNK1Q9HBU6 452 aa18.83■□□□□ 0.6
SGMS1-208ENST00000608287 PIH1D1Q9NWS0 290 aaKnown RBP18.83■□□□□ 0.6
SGMS1-208ENST00000608287 SLC23A2Q9UGH3 650 aa18.83■□□□□ 0.6
SGMS1-208ENST00000608287 DNAJC16Q9Y2G8 782 aa18.83■□□□□ 0.6
SGMS1-208ENST00000608287 ZKSCAN5Q9Y2L8 839 aa18.83■□□□□ 0.6
SGMS1-208ENST00000608287 HIVEP3Q5T1R4 2406 aa18.83■□□□□ 0.6
SGMS1-208ENST00000608287 K7EM74 188 aa18.82■□□□□ 0.6
SGMS1-208ENST00000608287 SRP72O76094 671 aaKnown RBP18.82■□□□□ 0.6
SGMS1-208ENST00000608287 SLC2A4P14672 509 aa18.82■□□□□ 0.6
SGMS1-208ENST00000608287 AKT1P31749 480 aa18.82■□□□□ 0.6
SGMS1-208ENST00000608287 HADHAP40939 763 aa18.82■□□□□ 0.6
SGMS1-208ENST00000608287 ZNF140P52738 457 aaPredicted RBP18.82■□□□□ 0.6
SGMS1-208ENST00000608287 NAA30Q147X3 362 aaPredicted RBP18.82■□□□□ 0.6
SGMS1-208ENST00000608287 POU6F1Q14863 301 aa18.82■□□□□ 0.6
SGMS1-208ENST00000608287 C6orf15Q6UXA7 325 aaPredicted RBP18.82■□□□□ 0.6
SGMS1-208ENST00000608287 LINC00523Q86TU6 105 aa18.82■□□□□ 0.6
SGMS1-208ENST00000608287 ZNF547Q8IVP9 402 aa18.82■□□□□ 0.6
SGMS1-208ENST00000608287 REXO1L1PQ8IX06 675 aa18.82■□□□□ 0.6
SGMS1-208ENST00000608287 SFRP1Q8N474 314 aa18.82■□□□□ 0.6
SGMS1-208ENST00000608287 AVL9Q8NBF6 648 aa18.82■□□□□ 0.6
SGMS1-208ENST00000608287 DDHD1Q8NEL9 900 aa18.82■□□□□ 0.6
SGMS1-208ENST00000608287 STAMBPL1Q96FJ0 436 aa18.82■□□□□ 0.6
SGMS1-208ENST00000608287 TIMM29Q9BSF4 260 aa18.82■□□□□ 0.6
SGMS1-208ENST00000608287 RAB6BQ9NRW1 208 aa18.82■□□□□ 0.6
SGMS1-208ENST00000608287 G3BP2Q9UN86 482 aaKnown RBP18.82■□□□□ 0.6
SGMS1-208ENST00000608287 JRKLQ9Y4A0 524 aa18.82■□□□□ 0.6
SGMS1-208ENST00000608287 ERI2A8K979 691 aaKnown RBP18.81■□□□□ 0.6
SGMS1-208ENST00000608287 A8MU76 341 aa18.81■□□□□ 0.6
SGMS1-208ENST00000608287 LDB2O43679 373 aa18.81■□□□□ 0.6
SGMS1-208ENST00000608287 MT-ND3P03897 115 aa18.81■□□□□ 0.6
SGMS1-208ENST00000608287 CCNYL3P0C7X3 344 aa18.81■□□□□ 0.6
SGMS1-208ENST00000608287 F3P13726 295 aa18.81■□□□□ 0.6
SGMS1-208ENST00000608287 CLCNKAP51800 687 aa18.81■□□□□ 0.6
SGMS1-208ENST00000608287 EPHA4P54764 986 aa18.81■□□□□ 0.6
SGMS1-208ENST00000608287 DRICH1Q6PGQ1 229 aaPredicted RBP18.81■□□□□ 0.6
SGMS1-208ENST00000608287 IYDQ6PHW0 289 aa18.81■□□□□ 0.6
SGMS1-208ENST00000608287 PPP1R21Q6ZMI0 780 aa18.81■□□□□ 0.6
SGMS1-208ENST00000608287 GSTA5Q7RTV2 222 aa18.81■□□□□ 0.6
SGMS1-208ENST00000608287 HPS6Q86YV9 775 aa18.81■□□□□ 0.6
SGMS1-208ENST00000608287 RASGEF1AQ8N9B8 481 aa18.81■□□□□ 0.6
SGMS1-208ENST00000608287 DNAAF3Q8N9W5 541 aa18.81■□□□□ 0.6
SGMS1-208ENST00000608287 GLIS1Q8NBF1 620 aa18.81■□□□□ 0.6
SGMS1-208ENST00000608287 OR52K1Q8NGK4 314 aa18.81■□□□□ 0.6
SGMS1-208ENST00000608287 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.81■□□□□ 0.6
SGMS1-208ENST00000608287 TWSG1Q9GZX9 223 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms