RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 DPEP2Q9H4A9 486 aa12.07□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 ZNF395Q9H8N7 513 aaPredicted RBP12.07□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 PARVBQ9HBI1 364 aa12.07□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 PFDN4Q9NQP4 134 aa12.07□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 ABCF3Q9NUQ8 709 aa12.07□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 CD274Q9NZQ7 290 aa12.07□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 PTBP2Q9UKA9 531 aaKnown RBP12.07□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 IKZF3Q9UKT9 509 aa12.07□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 SLC12A4Q9UP95 1085 aa12.07□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 TRIM33Q9UPN9 1127 aa12.07□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 CDYLQ9Y232 598 aa12.07□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 GOLGA8QA0A0J9YX86 632 aa12.06□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 GOLGA8OA6NCC3 632 aa12.06□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 PABPN1LA6NDY0 278 aaKnown RBP12.06□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 IGLON5A6NGN9 336 aa12.06□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 GOLGA8NF8WBI6 632 aa12.06□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 E2F3O00716 465 aa12.06□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 CDK14O94921 469 aa12.06□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 PCDH8O95206 1070 aa12.06□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 CHRNGP07510 517 aa12.06□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 ANXA5P08758 320 aa12.06□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 COL9A1P20849 921 aa12.06□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 CYP2A7P20853 494 aa12.06□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 NUDT1P36639 197 aa12.06□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 DGKEP52429 567 aa12.06□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 CDK3Q00526 305 aa12.06□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 BNIP1Q12981 228 aa12.06□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 KHDC1Q4VXA5 237 aaKnown RBP12.06□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 ATG14Q6ZNE5 492 aa12.06□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 SYT13Q7L8C5 426 aa12.06□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 CLNKQ7Z7G1 428 aa12.06□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 CUZD1Q86UP6 607 aa12.06□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 ADHFE1Q8IWW8 467 aa12.06□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 KLHDC8AQ8IYD2 350 aa12.06□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 CLYBLQ8N0X4 340 aa12.06□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 ZNF687Q8N1G0 1237 aa12.06□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 OXR1Q8N573 874 aa12.06□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 TP53I13Q8NBR0 393 aaPredicted RBP12.06□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 RPLP0P6Q8NHW5 317 aa12.06□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 HM13Q8TCT9 377 aa12.06□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 ELMO1Q92556 727 aa12.06□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 TMEM159Q96B96 161 aa12.06□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 ERP27Q96DN0 273 aa12.06□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 SHDQ96IW2 340 aa12.06□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 MRGPRX1Q96LB2 322 aa12.06□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 MAGEB10Q96LZ2 347 aaPredicted RBP12.06□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 ZNF382Q96SR6 550 aa12.06□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 NELL2Q99435 816 aa12.06□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 UNKQ9C0B0 810 aaKnown RBP12.06□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 SGK2Q9HBY8 427 aa12.06□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 CYP4F12Q9HCS2 524 aa12.06□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 POLMQ9NP87 494 aaPredicted RBP12.06□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 PHPT1Q9NRX4 125 aaPredicted RBP12.06□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 TXLNGQ9NUQ3 528 aa12.06□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 PNPOQ9NVS9 261 aa12.06□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 USP36Q9P275 1121 aaKnown RBP12.06□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 HEY2Q9UBP5 337 aa12.06□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 WNT16Q9UBV4 365 aa12.06□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 ZFP69BQ9UJL9 534 aa12.06□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 PCTPQ9UKL6 214 aa12.06□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 COQ6Q9Y2Z9 468 aa12.06□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 PLK4O00444 970 aa12.05□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 GRID2O43424 1007 aa12.05□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 PSIP1O75475 530 aaKnown RBP12.05□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 ESRRBO95718 433 aa12.05□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 ASGR2P07307 311 aa12.05□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 HIST1H2AGP0C0S8 130 aaPredicted RBP12.05□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 ACADMP11310 421 aa12.05□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 MYCLP1P12525 358 aaPredicted RBP12.05□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 HIST1H2ADP20671 130 aa12.05□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 MPSTP25325 297 aa12.05□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 SERPINB3P29508 390 aa12.05□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 EEF1DP29692 281 aaKnown RBP12.05□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 IDH3AP50213 366 aa12.05□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 RASSF2P50749 326 aa12.05□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 HK3P52790 923 aa12.05□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 STARD6P59095 220 aa12.05□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 CLCQ05315 142 aa12.05□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 DMPKQ09013 629 aa12.05□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 SGCGQ13326 291 aa12.05□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 TUBB3Q13509 450 aa12.05□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 CCDC85BQ15834 202 aaPredicted RBP12.05□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 WSCD2Q2TBF2 565 aa12.05□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 SYTL3Q4VX76 610 aa12.05□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 ACAD11Q709F0 780 aa12.05□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 MAVSQ7Z434 540 aa12.05□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 OR56A4Q8NGH8 313 aa12.05□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 OR2L2Q8NH16 312 aa12.05□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 MCOLN3Q8TDD5 553 aa12.05□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 ACTRT2Q8TDY3 377 aa12.05□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 AGAP11Q8TF27 550 aa12.05□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 ATL1Q8WXF7 558 aa12.05□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 RHBDF1Q96CC6 855 aa12.05□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 HIST1H2AHQ96KK5 128 aa12.05□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 FOPNLQ96NB1 174 aa12.05□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 HIST1H2AJQ99878 128 aa12.05□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 H2AFJQ9BTM1 129 aa12.05□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 WDR26Q9H7D7 661 aa12.05□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 MEAF6Q9HAF1 191 aa12.05□□□□□ -0.48
NEDD8-MDP1-203ENST00000604306 MARCOQ9UEW3 520 aaPredicted RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms