RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 HSPA14Q0VDF9 509 aa14.21□□□□□ -0.13
VRK3-217ENST00000599538 C6orf136Q5SQH8 315 aa14.21□□□□□ -0.13
VRK3-217ENST00000599538 BRAT1Q6PJG6 821 aa14.21□□□□□ -0.13
VRK3-217ENST00000599538 CELF5Q8N6W0 485 aaKnown RBP14.21□□□□□ -0.13
VRK3-217ENST00000599538 BEND7Q8N7W2 519 aaPredicted RBP14.21□□□□□ -0.13
VRK3-217ENST00000599538 PPFIBP2Q8ND30 876 aa14.21□□□□□ -0.13
VRK3-217ENST00000599538 VPS33AQ96AX1 596 aa14.21□□□□□ -0.13
VRK3-217ENST00000599538 EBF3Q9H4W6 596 aa14.21□□□□□ -0.13
VRK3-217ENST00000599538 MRGBPQ9NV56 204 aa14.21□□□□□ -0.13
VRK3-217ENST00000599538 AIG1Q9NVV5 245 aa14.21□□□□□ -0.13
VRK3-217ENST00000599538 ATG2AQ2TAZ0 1938 aa14.21□□□□□ -0.13
VRK3-217ENST00000599538 ASPDHA6ND91 283 aa14.21□□□□□ -0.13
VRK3-217ENST00000599538 FADS2P1A8MWK0 482 aa14.21□□□□□ -0.13
VRK3-217ENST00000599538 TRIM38O00635 465 aa14.21□□□□□ -0.13
VRK3-217ENST00000599538 SGTAO43765 313 aa14.21□□□□□ -0.13
VRK3-217ENST00000599538 BCAS2O75934 225 aaPredicted RBP14.21□□□□□ -0.13
VRK3-217ENST00000599538 CHEK2O96017 543 aa14.21□□□□□ -0.13
VRK3-217ENST00000599538 S100BP04271 92 aaPredicted RBP14.21□□□□□ -0.13
VRK3-217ENST00000599538 VCLP18206 1134 aa14.21□□□□□ -0.13
VRK3-217ENST00000599538 IL12AP29459 219 aa14.21□□□□□ -0.13
VRK3-217ENST00000599538 VIPR1P32241 457 aa14.21□□□□□ -0.13
VRK3-217ENST00000599538 POLR2LP62875 67 aaKnown RBP14.21□□□□□ -0.13
VRK3-217ENST00000599538 CDC16Q13042 620 aa14.21□□□□□ -0.13
VRK3-217ENST00000599538 GPM6BQ13491 265 aa14.21□□□□□ -0.13
VRK3-217ENST00000599538 ABRAXAS2Q15018 415 aa14.21□□□□□ -0.13
VRK3-217ENST00000599538 RPS6KA2Q15349 733 aa14.21□□□□□ -0.13
VRK3-217ENST00000599538 AAK1Q2M2I8 961 aa14.21□□□□□ -0.13
VRK3-217ENST00000599538 PLA2G4EQ3MJ16 856 aa14.21□□□□□ -0.13
VRK3-217ENST00000599538 ANO7Q6IWH7 933 aa14.21□□□□□ -0.13
VRK3-217ENST00000599538 IL27RAQ6UWB1 636 aa14.21□□□□□ -0.13
VRK3-217ENST00000599538 PLPP6Q8IY26 295 aa14.21□□□□□ -0.13
VRK3-217ENST00000599538 VN1R2Q8NFZ6 395 aa14.21□□□□□ -0.13
VRK3-217ENST00000599538 ATP6V1E2Q96A05 226 aa14.21□□□□□ -0.13
VRK3-217ENST00000599538 ERLEC1Q96DZ1 483 aa14.21□□□□□ -0.13
VRK3-217ENST00000599538 ZNF184Q99676 751 aaPredicted RBP14.21□□□□□ -0.13
VRK3-217ENST00000599538 SLC2A11Q9BYW1 496 aa14.21□□□□□ -0.13
VRK3-217ENST00000599538 FARSBQ9NSD9 589 aaKnown RBP14.21□□□□□ -0.13
VRK3-217ENST00000599538 KCTD5Q9NXV2 234 aa14.21□□□□□ -0.13
VRK3-217ENST00000599538 WWOXQ9NZC7 414 aa14.21□□□□□ -0.13
VRK3-217ENST00000599538 CD300AQ9UGN4 299 aa14.21□□□□□ -0.13
VRK3-217ENST00000599538 IL36AQ9UHA7 158 aa14.21□□□□□ -0.13
VRK3-217ENST00000599538 CROTQ9UKG9 612 aa14.21□□□□□ -0.13
VRK3-217ENST00000599538 TNPO3Q9Y5L0 923 aaKnown RBP14.21□□□□□ -0.13
VRK3-217ENST00000599538 TCF20Q9UGU0 1960 aaKnown RBP14.21□□□□□ -0.14
VRK3-217ENST00000599538 SOBPA7XYQ1 873 aa14.2□□□□□ -0.14
VRK3-217ENST00000599538 UPK3BL1B0FP48 263 aa14.2□□□□□ -0.14
VRK3-217ENST00000599538 UPK3BL2E5RIL1 263 aa14.2□□□□□ -0.14
VRK3-217ENST00000599538 FXYD1O00168 92 aa14.2□□□□□ -0.14
VRK3-217ENST00000599538 FFAR3O14843 346 aa14.2□□□□□ -0.14
VRK3-217ENST00000599538 GPR42O15529 346 aa14.2□□□□□ -0.14
VRK3-217ENST00000599538 MATN4O95460 622 aa14.2□□□□□ -0.14
VRK3-217ENST00000599538 RB1P06400 928 aa14.2□□□□□ -0.14
VRK3-217ENST00000599538 IDO1P14902 403 aa14.2□□□□□ -0.14
VRK3-217ENST00000599538 AOAHP28039 575 aa14.2□□□□□ -0.14
VRK3-217ENST00000599538 AKT1P31749 480 aa14.2□□□□□ -0.14
VRK3-217ENST00000599538 PSMD8P48556 350 aa14.2□□□□□ -0.14
VRK3-217ENST00000599538 SLC7A2P52569 658 aa14.2□□□□□ -0.14
VRK3-217ENST00000599538 NAA20P61599 178 aa14.2□□□□□ -0.14
VRK3-217ENST00000599538 BOP1Q14137 746 aaKnown RBP14.2□□□□□ -0.14
VRK3-217ENST00000599538 CAPRIN1Q14444 709 aaKnown RBP14.2□□□□□ -0.14
VRK3-217ENST00000599538 GRIN2CQ14957 1233 aa14.2□□□□□ -0.14
VRK3-217ENST00000599538 SLC44A4Q53GD3 710 aa14.2□□□□□ -0.14
VRK3-217ENST00000599538 FAM78AQ5JUQ0 283 aa14.2□□□□□ -0.14
VRK3-217ENST00000599538 BLOC1S3Q6QNY0 202 aa14.2□□□□□ -0.14
VRK3-217ENST00000599538 OSCP1Q8WVF1 389 aa14.2□□□□□ -0.14
VRK3-217ENST00000599538 RIOK2Q9BVS4 552 aaKnown RBP14.2□□□□□ -0.14
VRK3-217ENST00000599538 CD244Q9BZW8 370 aa14.2□□□□□ -0.14
VRK3-217ENST00000599538 FAM83DQ9H4H8 585 aa14.2□□□□□ -0.14
VRK3-217ENST00000599538 SPAG4Q9NPE6 437 aa14.2□□□□□ -0.14
VRK3-217ENST00000599538 PKD2L2Q9NZM6 624 aa14.2□□□□□ -0.14
VRK3-217ENST00000599538 TMEM181Q9P2C4 612 aa14.2□□□□□ -0.14
VRK3-217ENST00000599538 PDE10AQ9Y233 779 aa14.2□□□□□ -0.14
VRK3-217ENST00000599538 VPS4BO75351 444 aa14.2□□□□□ -0.14
VRK3-217ENST00000599538 HLA-EP13747 358 aa14.2□□□□□ -0.14
VRK3-217ENST00000599538 ATP1B2P14415 290 aaPredicted RBP14.2□□□□□ -0.14
VRK3-217ENST00000599538 NNMTP40261 264 aa14.2□□□□□ -0.14
VRK3-217ENST00000599538 GSTA3Q16772 222 aa14.2□□□□□ -0.14
VRK3-217ENST00000599538 GAB4Q2WGN9 574 aa14.2□□□□□ -0.14
VRK3-217ENST00000599538 SFT2D3Q587I9 215 aa14.2□□□□□ -0.14
VRK3-217ENST00000599538 CMPK2Q5EBM0 449 aa14.2□□□□□ -0.14
VRK3-217ENST00000599538 MILR1Q7Z6M3 343 aa14.2□□□□□ -0.14
VRK3-217ENST00000599538 ZNF557Q8N988 423 aaPredicted RBP14.2□□□□□ -0.14
VRK3-217ENST00000599538 FNDC5Q8NAU1 212 aa14.2□□□□□ -0.14
VRK3-217ENST00000599538 UCMAQ8WVF2 138 aa14.2□□□□□ -0.14
VRK3-217ENST00000599538 GPATCH1Q9BRR8 931 aaKnown RBP14.2□□□□□ -0.14
VRK3-217ENST00000599538 ZDHHC4Q9NPG8 344 aa14.2□□□□□ -0.14
VRK3-217ENST00000599538 FAM8A1Q9UBU6 413 aa14.2□□□□□ -0.14
VRK3-217ENST00000599538 TMEM202A6NGA9 273 aa14.19□□□□□ -0.14
VRK3-217ENST00000599538 OR2AG2A6NM03 316 aa14.19□□□□□ -0.14
VRK3-217ENST00000599538 C16orf96A6NNT2 1141 aa14.19□□□□□ -0.14
VRK3-217ENST00000599538 SLC9A3R1O14745 358 aaPredicted RBP14.19□□□□□ -0.14
VRK3-217ENST00000599538 SYNCRIPO60506 623 aaKnown RBP14.19□□□□□ -0.14
VRK3-217ENST00000599538 EPORP19235 508 aa14.19□□□□□ -0.14
VRK3-217ENST00000599538 PBX2P40425 430 aa14.19□□□□□ -0.14
VRK3-217ENST00000599538 NRIP1P48552 1158 aa14.19□□□□□ -0.14
VRK3-217ENST00000599538 RPIAP49247 311 aa14.19□□□□□ -0.14
VRK3-217ENST00000599538 CLNS1AP54105 237 aaKnown RBP14.19□□□□□ -0.14
VRK3-217ENST00000599538 ERVK-8P63133 956 aa14.19□□□□□ -0.14
VRK3-217ENST00000599538 TRIM25Q14258 630 aaKnown RBP14.19□□□□□ -0.14
VRK3-217ENST00000599538 GBX1Q14549 363 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms