RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 SNX1Q13596 522 aa13.46□□□□□ -0.25
SCAF1-203ENST00000598359 KCTD19Q17RG1 926 aaPredicted RBP13.46□□□□□ -0.25
SCAF1-203ENST00000598359 LINC00303Q3SY05 128 aa13.46□□□□□ -0.25
SCAF1-203ENST00000598359 PAPD7Q5XG87 772 aaKnown RBP13.46□□□□□ -0.25
SCAF1-203ENST00000598359 METRNLQ641Q3 311 aa13.46□□□□□ -0.25
SCAF1-203ENST00000598359 NXPE1Q8N323 547 aa13.46□□□□□ -0.25
SCAF1-203ENST00000598359 EXD3Q8N9H8 876 aa13.46□□□□□ -0.25
SCAF1-203ENST00000598359 C1orf54Q8WWF1 131 aa13.46□□□□□ -0.25
SCAF1-203ENST00000598359 ELMO2Q96JJ3 720 aa13.46□□□□□ -0.25
SCAF1-203ENST00000598359 SPRY4Q9C004 299 aa13.46□□□□□ -0.25
SCAF1-203ENST00000598359 LRRC40Q9H9A6 602 aa13.46□□□□□ -0.25
SCAF1-203ENST00000598359 PILRAQ9UKJ1 303 aa13.46□□□□□ -0.25
SCAF1-203ENST00000598359 MGAT4DA6NG13 374 aa13.45□□□□□ -0.26
SCAF1-203ENST00000598359 PYCARD-AS1I3L0S3 204 aa13.45□□□□□ -0.26
SCAF1-203ENST00000598359 POLR1CO15160 346 aaPredicted RBP13.45□□□□□ -0.26
SCAF1-203ENST00000598359 LIASO43766 372 aa13.45□□□□□ -0.26
SCAF1-203ENST00000598359 KCNJ13O60928 360 aa13.45□□□□□ -0.26
SCAF1-203ENST00000598359 AP2A1O95782 977 aa13.45□□□□□ -0.26
SCAF1-203ENST00000598359 ANKRD34CP0C6C1 535 aa13.45□□□□□ -0.26
SCAF1-203ENST00000598359 MTHFD1P11586 935 aaKnown RBP13.45□□□□□ -0.26
SCAF1-203ENST00000598359 ETS1P14921 441 aa13.45□□□□□ -0.26
SCAF1-203ENST00000598359 ITGALP20701 1170 aa13.45□□□□□ -0.26
SCAF1-203ENST00000598359 PLCL1Q15111 1095 aa13.45□□□□□ -0.26
SCAF1-203ENST00000598359 WHAMMP3Q1A5X7 153 aa13.45□□□□□ -0.26
SCAF1-203ENST00000598359 BCL7AQ4VC05 210 aa13.45□□□□□ -0.26
SCAF1-203ENST00000598359 CCDC38Q502W7 563 aa13.45□□□□□ -0.26
SCAF1-203ENST00000598359 ZRANB3Q5FWF4 1079 aa13.45□□□□□ -0.26
SCAF1-203ENST00000598359 CACHD1Q5VU97 1274 aa13.45□□□□□ -0.26
SCAF1-203ENST00000598359 CEACAM20Q6UY09 585 aa13.45□□□□□ -0.26
SCAF1-203ENST00000598359 CFAP206Q8IYR0 622 aa13.45□□□□□ -0.26
SCAF1-203ENST00000598359 RNF10Q8N5U6 811 aaKnown RBP13.45□□□□□ -0.26
SCAF1-203ENST00000598359 TRIM58Q8NG06 486 aa13.45□□□□□ -0.26
SCAF1-203ENST00000598359 OR2L2Q8NH16 312 aa13.45□□□□□ -0.26
SCAF1-203ENST00000598359 WBP1Q96G27 269 aa13.45□□□□□ -0.26
SCAF1-203ENST00000598359 DCUN1D1Q96GG9 259 aa13.45□□□□□ -0.26
SCAF1-203ENST00000598359 ZNF514Q96K75 400 aaPredicted RBP13.45□□□□□ -0.26
SCAF1-203ENST00000598359 RMDN2Q96LZ7 410 aa13.45□□□□□ -0.26
SCAF1-203ENST00000598359 C12orf66Q96MD2 445 aa13.45□□□□□ -0.26
SCAF1-203ENST00000598359 PPP1R2P1Q96PQ5 205 aa13.45□□□□□ -0.26
SCAF1-203ENST00000598359 COPS8Q99627 209 aa13.45□□□□□ -0.26
SCAF1-203ENST00000598359 CARD6Q9BX69 1037 aa13.45□□□□□ -0.26
SCAF1-203ENST00000598359 FBXO8Q9NRD0 319 aa13.45□□□□□ -0.26
SCAF1-203ENST00000598359 DNMT3AQ9Y6K1 912 aaPredicted RBP13.45□□□□□ -0.26
SCAF1-203ENST00000598359 IGHV5-51A0A0C4DH38 117 aa13.44□□□□□ -0.26
SCAF1-203ENST00000598359 LOC101059948A0A1B0GTJ6 334 aa13.44□□□□□ -0.26
SCAF1-203ENST00000598359 OR51F1A6NGY5 319 aa13.44□□□□□ -0.26
SCAF1-203ENST00000598359 AGAP14A8MT82 685 aa13.44□□□□□ -0.26
SCAF1-203ENST00000598359 STK17BO94768 372 aa13.44□□□□□ -0.26
SCAF1-203ENST00000598359 IFNB1P01574 187 aa13.44□□□□□ -0.26
SCAF1-203ENST00000598359 FAM87AP0C7U9 286 aa13.44□□□□□ -0.26
SCAF1-203ENST00000598359 ZNF28P17035 718 aa13.44□□□□□ -0.26
SCAF1-203ENST00000598359 HADHAP40939 763 aa13.44□□□□□ -0.26
SCAF1-203ENST00000598359 ARCN1P48444 511 aaKnown RBP13.44□□□□□ -0.26
SCAF1-203ENST00000598359 TUBB4BP68371 445 aa13.44□□□□□ -0.26
SCAF1-203ENST00000598359 PDE1BQ01064 536 aa13.44□□□□□ -0.26
SCAF1-203ENST00000598359 KCNAB1Q14722 419 aa13.44□□□□□ -0.26
SCAF1-203ENST00000598359 OASLQ15646 514 aaKnown RBP13.44□□□□□ -0.26
SCAF1-203ENST00000598359 TBR1Q16650 682 aa13.44□□□□□ -0.26
SCAF1-203ENST00000598359 SEL1L2Q5TEA6 688 aa13.44□□□□□ -0.26
SCAF1-203ENST00000598359 CERS6Q6ZMG9 384 aa13.44□□□□□ -0.26
SCAF1-203ENST00000598359 TAS2R42Q7RTR8 314 aa13.44□□□□□ -0.26
SCAF1-203ENST00000598359 SNX20Q7Z614 316 aa13.44□□□□□ -0.26
SCAF1-203ENST00000598359 SERPINA9Q86WD7 417 aa13.44□□□□□ -0.26
SCAF1-203ENST00000598359 SLC13A5Q86YT5 568 aaPredicted RBP13.44□□□□□ -0.26
SCAF1-203ENST00000598359 RBM12BQ8IXT5 1001 aaKnown RBP13.44□□□□□ -0.26
SCAF1-203ENST00000598359 PIANPQ8IYJ0 282 aa13.44□□□□□ -0.26
SCAF1-203ENST00000598359 CLDN19Q8N6F1 224 aa13.44□□□□□ -0.26
SCAF1-203ENST00000598359 CEP112Q8N8E3 955 aa13.44□□□□□ -0.26
SCAF1-203ENST00000598359 ZSCAN1Q8NBB4 408 aa13.44□□□□□ -0.26
SCAF1-203ENST00000598359 GLIS1Q8NBF1 620 aa13.44□□□□□ -0.26
SCAF1-203ENST00000598359 LRRN4CLQ8ND94 238 aa13.44□□□□□ -0.26
SCAF1-203ENST00000598359 MNS1Q8NEH6 495 aa13.44□□□□□ -0.26
SCAF1-203ENST00000598359 OR52K1Q8NGK4 314 aa13.44□□□□□ -0.26
SCAF1-203ENST00000598359 ULK4Q96C45 1275 aa13.44□□□□□ -0.26
SCAF1-203ENST00000598359 LRRC45Q96CN5 670 aa13.44□□□□□ -0.26
SCAF1-203ENST00000598359 TEFMQ96QE5 360 aaKnown RBP13.44□□□□□ -0.26
SCAF1-203ENST00000598359 OR6C1Q96RD1 312 aa13.44□□□□□ -0.26
SCAF1-203ENST00000598359 NRTNQ99748 197 aa13.44□□□□□ -0.26
SCAF1-203ENST00000598359 SLC12A9Q9BXP2 914 aa13.44□□□□□ -0.26
SCAF1-203ENST00000598359 ZNF768Q9H5H4 540 aaKnown RBP13.44□□□□□ -0.26
SCAF1-203ENST00000598359 NLE1Q9NVX2 485 aaPredicted RBP13.44□□□□□ -0.26
SCAF1-203ENST00000598359 SLC35G4P0C7Q5 338 aa13.43□□□□□ -0.26
SCAF1-203ENST00000598359 RALBP11234 206 aa13.43□□□□□ -0.26
SCAF1-203ENST00000598359 ATP1B2P14415 290 aaPredicted RBP13.43□□□□□ -0.26
SCAF1-203ENST00000598359 GRIA1P42261 906 aa13.43□□□□□ -0.26
SCAF1-203ENST00000598359 PRLHRP49683 370 aa13.43□□□□□ -0.26
SCAF1-203ENST00000598359 P3H1Q32P28 736 aa13.43□□□□□ -0.26
SCAF1-203ENST00000598359 FBXO38Q6PIJ6 1188 aa13.43□□□□□ -0.26
SCAF1-203ENST00000598359 PRSS42Q7Z5A4 293 aa13.43□□□□□ -0.26
SCAF1-203ENST00000598359 NLGN4XQ8N0W4 816 aa13.43□□□□□ -0.26
SCAF1-203ENST00000598359 NLGN4YQ8NFZ3 816 aaPredicted RBP13.43□□□□□ -0.26
SCAF1-203ENST00000598359 ZDHHC12Q96GR4 267 aa13.43□□□□□ -0.26
SCAF1-203ENST00000598359 CDKN2AIPNLQ96HQ2 116 aa13.43□□□□□ -0.26
SCAF1-203ENST00000598359 PPM1MQ96MI6 270 aa13.43□□□□□ -0.26
SCAF1-203ENST00000598359 ETNK1Q9HBU6 452 aa13.43□□□□□ -0.26
SCAF1-203ENST00000598359 ZDHHC3Q9NYG2 299 aa13.43□□□□□ -0.26
SCAF1-203ENST00000598359 IL17BQ9UHF5 180 aa13.43□□□□□ -0.26
SCAF1-203ENST00000598359 FEZ2Q9UHY8 353 aaPredicted RBP13.43□□□□□ -0.26
SCAF1-203ENST00000598359 ACSL5Q9ULC5 683 aa13.43□□□□□ -0.26
SCAF1-203ENST00000598359 ZNF148Q9UQR1 794 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms