RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 OR7A17O14581 309 aa16.74■□□□□ 0.27
SHKBP1-216ENST00000598201 SPINT1O43278 529 aa16.74■□□□□ 0.27
SHKBP1-216ENST00000598201 OR56A5P0C7T3 313 aa16.74■□□□□ 0.27
SHKBP1-216ENST00000598201 UROSP10746 265 aa16.74■□□□□ 0.27
SHKBP1-216ENST00000598201 ATP1B2P14415 290 aaPredicted RBP16.74■□□□□ 0.27
SHKBP1-216ENST00000598201 AOAHP28039 575 aa16.74■□□□□ 0.27
SHKBP1-216ENST00000598201 AKT1P31749 480 aa16.74■□□□□ 0.27
SHKBP1-216ENST00000598201 HSPA7P48741 367 aa16.74■□□□□ 0.27
SHKBP1-216ENST00000598201 GTF2A1P52655 376 aaPredicted RBP16.74■□□□□ 0.27
SHKBP1-216ENST00000598201 TTLL9Q3SXZ7 439 aa16.74■□□□□ 0.27
SHKBP1-216ENST00000598201 FNDC3BQ53EP0 1204 aaKnown RBP16.74■□□□□ 0.27
SHKBP1-216ENST00000598201 C9orf64Q5T6V5 341 aa16.74■□□□□ 0.27
SHKBP1-216ENST00000598201 ICE2Q659A1 982 aa16.74■□□□□ 0.27
SHKBP1-216ENST00000598201 PAOXQ6QHF9 649 aa16.74■□□□□ 0.27
SHKBP1-216ENST00000598201 VITQ6UXI7 678 aa16.74■□□□□ 0.27
SHKBP1-216ENST00000598201 MBOAT1Q6ZNC8 495 aa16.74■□□□□ 0.27
SHKBP1-216ENST00000598201 TECPR1Q7Z6L1 1165 aa16.74■□□□□ 0.27
SHKBP1-216ENST00000598201 FBXW8Q8N3Y1 598 aa16.74■□□□□ 0.27
SHKBP1-216ENST00000598201 CDYL2Q8N8U2 506 aa16.74■□□□□ 0.27
SHKBP1-216ENST00000598201 DTX3LQ8TDB6 740 aa16.74■□□□□ 0.27
SHKBP1-216ENST00000598201 TUBGCP3Q96CW5 907 aa16.74■□□□□ 0.27
SHKBP1-216ENST00000598201 TRPV4Q9HBA0 871 aa16.74■□□□□ 0.27
SHKBP1-216ENST00000598201 FBP2O00757 339 aa16.74■□□□□ 0.27
SHKBP1-216ENST00000598201 SGTAO43765 313 aa16.74■□□□□ 0.27
SHKBP1-216ENST00000598201 S100BP04271 92 aaPredicted RBP16.74■□□□□ 0.27
SHKBP1-216ENST00000598201 DPP6P42658 865 aa16.74■□□□□ 0.27
SHKBP1-216ENST00000598201 GDF5P43026 501 aa16.74■□□□□ 0.27
SHKBP1-216ENST00000598201 MTTPP55157 894 aa16.74■□□□□ 0.27
SHKBP1-216ENST00000598201 CREB5Q02930 508 aa16.74■□□□□ 0.27
SHKBP1-216ENST00000598201 WLSQ5T9L3 541 aa16.74■□□□□ 0.27
SHKBP1-216ENST00000598201 C6orf163Q5TEZ5 329 aa16.74■□□□□ 0.27
SHKBP1-216ENST00000598201 LIPIQ6XZB0 460 aa16.74■□□□□ 0.27
SHKBP1-216ENST00000598201 VRK3Q8IV63 474 aa16.74■□□□□ 0.27
SHKBP1-216ENST00000598201 HCAR2Q8TDS4 363 aa16.74■□□□□ 0.27
SHKBP1-216ENST00000598201 STMN2Q93045 179 aa16.74■□□□□ 0.27
SHKBP1-216ENST00000598201 TMEM79Q9BSE2 394 aa16.74■□□□□ 0.27
SHKBP1-216ENST00000598201 TACO1Q9BSH4 297 aaKnown RBP16.74■□□□□ 0.27
SHKBP1-216ENST00000598201 NUSAP1Q9BXS6 441 aaKnown RBP16.74■□□□□ 0.27
SHKBP1-216ENST00000598201 EFCAB1Q9HAE3 211 aa16.74■□□□□ 0.27
SHKBP1-216ENST00000598201 TNPO3Q9Y5L0 923 aaKnown RBP16.74■□□□□ 0.27
SHKBP1-216ENST00000598201 ST14Q9Y5Y6 855 aa16.74■□□□□ 0.27
SHKBP1-216ENST00000598201 TCF20Q9UGU0 1960 aaKnown RBP16.74■□□□□ 0.27
SHKBP1-216ENST00000598201 ENO3P13929 434 aaPredicted RBP16.73■□□□□ 0.27
SHKBP1-216ENST00000598201 HGFP14210 728 aa16.73■□□□□ 0.27
SHKBP1-216ENST00000598201 VCLP18206 1134 aa16.73■□□□□ 0.27
SHKBP1-216ENST00000598201 GPX3P22352 226 aa16.73■□□□□ 0.27
SHKBP1-216ENST00000598201 ATP4BP51164 291 aa16.73■□□□□ 0.27
SHKBP1-216ENST00000598201 HSPA14Q0VDF9 509 aa16.73■□□□□ 0.27
SHKBP1-216ENST00000598201 GTF2H2Q13888 395 aa16.73■□□□□ 0.27
SHKBP1-216ENST00000598201 GBX1Q14549 363 aa16.73■□□□□ 0.27
SHKBP1-216ENST00000598201 HNRNPA1L2Q32P51 320 aaKnown RBP16.73■□□□□ 0.27
SHKBP1-216ENST00000598201 GTF2H2CQ6P1K8 395 aa16.73■□□□□ 0.27
SHKBP1-216ENST00000598201 C16orf89Q6UX73 402 aa16.73■□□□□ 0.27
SHKBP1-216ENST00000598201 MYLK4Q86YV6 388 aaPredicted RBP16.73■□□□□ 0.27
SHKBP1-216ENST00000598201 FUNDC1Q8IVP5 155 aa16.73■□□□□ 0.27
SHKBP1-216ENST00000598201 OR2T11Q8NH01 316 aa16.73■□□□□ 0.27
SHKBP1-216ENST00000598201 RHBDF1Q96CC6 855 aa16.73■□□□□ 0.27
SHKBP1-216ENST00000598201 EGFL8Q99944 293 aa16.73■□□□□ 0.27
SHKBP1-216ENST00000598201 WRAP53Q9BUR4 548 aaKnown RBP16.73■□□□□ 0.27
SHKBP1-216ENST00000598201 PLA2G2FQ9BZM2 168 aa16.73■□□□□ 0.27
SHKBP1-216ENST00000598201 ZDHHC4Q9NPG8 344 aa16.73■□□□□ 0.27
SHKBP1-216ENST00000598201 KLHL42Q9P2K6 505 aa16.73■□□□□ 0.27
SHKBP1-216ENST00000598201 POMPQ9Y244 141 aa16.73■□□□□ 0.27
SHKBP1-216ENST00000598201 COL4A3Q01955 1670 aa16.73■□□□□ 0.27
SHKBP1-216ENST00000598201 PLXNA2O75051 1894 aa16.73■□□□□ 0.27
SHKBP1-216ENST00000598201 PLK4O00444 970 aa16.73■□□□□ 0.27
SHKBP1-216ENST00000598201 CBSLP0DN79 551 aa16.73■□□□□ 0.27
SHKBP1-216ENST00000598201 LBPP18428 481 aa16.73■□□□□ 0.27
SHKBP1-216ENST00000598201 CBSP35520 551 aa16.73■□□□□ 0.27
SHKBP1-216ENST00000598201 PKNOX1P55347 436 aa16.73■□□□□ 0.27
SHKBP1-216ENST00000598201 NME5P56597 212 aa16.73■□□□□ 0.27
SHKBP1-216ENST00000598201 GRM2Q14416 872 aa16.73■□□□□ 0.27
SHKBP1-216ENST00000598201 ZNF234Q14588 700 aa16.73■□□□□ 0.27
SHKBP1-216ENST00000598201 CRY1Q16526 586 aa16.73■□□□□ 0.27
SHKBP1-216ENST00000598201 PREPLQ4J6C6 727 aaPredicted RBP16.73■□□□□ 0.27
SHKBP1-216ENST00000598201 XKR7Q5GH72 579 aa16.73■□□□□ 0.27
SHKBP1-216ENST00000598201 PTCRAQ6ISU1 281 aaPredicted RBP16.73■□□□□ 0.27
SHKBP1-216ENST00000598201 TRAM1L1Q8N609 369 aa16.73■□□□□ 0.27
SHKBP1-216ENST00000598201 BEND7Q8N7W2 519 aaPredicted RBP16.73■□□□□ 0.27
SHKBP1-216ENST00000598201 ARRDC3Q96B67 414 aa16.73■□□□□ 0.27
SHKBP1-216ENST00000598201 ERLEC1Q96DZ1 483 aa16.73■□□□□ 0.27
SHKBP1-216ENST00000598201 DCUN1D1Q96GG9 259 aa16.73■□□□□ 0.27
SHKBP1-216ENST00000598201 CDRT15Q96T59 188 aa16.73■□□□□ 0.27
SHKBP1-216ENST00000598201 WDR41Q9HAD4 459 aa16.73■□□□□ 0.27
SHKBP1-216ENST00000598201 OBP2AQ9NY56 170 aa16.73■□□□□ 0.27
SHKBP1-216ENST00000598201 THEGQ9P2T0 379 aa16.73■□□□□ 0.27
SHKBP1-216ENST00000598201 PPM1HQ9ULR3 514 aa16.73■□□□□ 0.27
SHKBP1-216ENST00000598201 MUC22E2RYF6 1773 aaPredicted RBP16.72■□□□□ 0.27
SHKBP1-216ENST00000598201 GIPC1O14908 333 aa16.72■□□□□ 0.27
SHKBP1-216ENST00000598201 CFLARO15519 480 aa16.72■□□□□ 0.27
SHKBP1-216ENST00000598201 ELFN1P0C7U0 828 aa16.72■□□□□ 0.27
SHKBP1-216ENST00000598201 PRR35P0CG20 571 aa16.72■□□□□ 0.27
SHKBP1-216ENST00000598201 OPRD1P41143 372 aa16.72■□□□□ 0.27
SHKBP1-216ENST00000598201 SESN3P58005 492 aa16.72■□□□□ 0.27
SHKBP1-216ENST00000598201 ART3Q13508 389 aa16.72■□□□□ 0.27
SHKBP1-216ENST00000598201 CCNIQ14094 377 aa16.72■□□□□ 0.27
SHKBP1-216ENST00000598201 ACOX1Q15067 660 aa16.72■□□□□ 0.27
SHKBP1-216ENST00000598201 PDGFRLQ15198 375 aa16.72■□□□□ 0.27
SHKBP1-216ENST00000598201 PUS10Q3MIT2 529 aaKnown RBP16.72■□□□□ 0.27
SHKBP1-216ENST00000598201 PGAM4Q8N0Y7 254 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms