RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 SAR1BQ9Y6B6 198 aa20.62■□□□□ 0.89
PNKP-209ENST00000596726 AVILO75366 819 aa20.61■□□□□ 0.89
PNKP-209ENST00000596726 C9P02748 559 aa20.61■□□□□ 0.89
PNKP-209ENST00000596726 SLC35G4P0C7Q5 338 aa20.61■□□□□ 0.89
PNKP-209ENST00000596726 MLNP12872 115 aa20.61■□□□□ 0.89
PNKP-209ENST00000596726 TYRP1P17643 537 aa20.61■□□□□ 0.89
PNKP-209ENST00000596726 PPM1FP49593 454 aaPredicted RBP20.61■□□□□ 0.89
PNKP-209ENST00000596726 FASTKD1Q53R41 847 aaKnown RBP20.61■□□□□ 0.89
PNKP-209ENST00000596726 PLXDC1Q8IUK5 500 aa20.61■□□□□ 0.89
PNKP-209ENST00000596726 ZFPM2Q8WW38 1151 aa20.61■□□□□ 0.89
PNKP-209ENST00000596726 C12orf66Q96MD2 445 aa20.61■□□□□ 0.89
PNKP-209ENST00000596726 TTC1Q99614 292 aa20.61■□□□□ 0.89
PNKP-209ENST00000596726 B3GNT4Q9C0J1 378 aa20.61■□□□□ 0.89
PNKP-209ENST00000596726 OR52A5Q9H2C5 316 aa20.61■□□□□ 0.89
PNKP-209ENST00000596726 MARCH4Q9P2E8 410 aaPredicted RBP20.61■□□□□ 0.89
PNKP-209ENST00000596726 CFAP20Q9Y6A4 193 aaKnown RBP20.61■□□□□ 0.89
PNKP-209ENST00000596726 CTAGE9A4FU28 777 aa20.6■□□□□ 0.89
PNKP-209ENST00000596726 AGRPO00253 132 aa20.6■□□□□ 0.89
PNKP-209ENST00000596726 NVLO15381 856 aaKnown RBP20.6■□□□□ 0.89
PNKP-209ENST00000596726 RRP8O43159 456 aaKnown RBP20.6■□□□□ 0.89
PNKP-209ENST00000596726 OR1I1O60431 355 aa20.6■□□□□ 0.89
PNKP-209ENST00000596726 FGF3P11487 239 aaPredicted RBP20.6■□□□□ 0.89
PNKP-209ENST00000596726 CCL4P13236 92 aa20.6■□□□□ 0.89
PNKP-209ENST00000596726 AMD1P17707 334 aa20.6■□□□□ 0.89
PNKP-209ENST00000596726 ARNTP27540 789 aa20.6■□□□□ 0.89
PNKP-209ENST00000596726 SLC5A2P31639 672 aa20.6■□□□□ 0.89
PNKP-209ENST00000596726 PTGIRP43119 386 aa20.6■□□□□ 0.89
PNKP-209ENST00000596726 RPA4Q13156 261 aa20.6■□□□□ 0.89
PNKP-209ENST00000596726 NAT8LQ8N9F0 302 aa20.6■□□□□ 0.89
PNKP-209ENST00000596726 AGBL5Q8NDL9 886 aa20.6■□□□□ 0.89
PNKP-209ENST00000596726 RSC1A1Q92681 617 aa20.6■□□□□ 0.89
PNKP-209ENST00000596726 MFSD3Q96ES6 412 aa20.6■□□□□ 0.89
PNKP-209ENST00000596726 CAPZA3Q96KX2 299 aa20.6■□□□□ 0.89
PNKP-209ENST00000596726 ZMYND15Q9H091 742 aa20.6■□□□□ 0.89
PNKP-209ENST00000596726 CATSPERZQ9NTU4 200 aa20.6■□□□□ 0.89
PNKP-209ENST00000596726 IMP3Q9NV31 184 aaKnown RBP20.6■□□□□ 0.89
PNKP-209ENST00000596726 EPHA6Q9UF33 1036 aa20.6■□□□□ 0.89
PNKP-209ENST00000596726 ACSL6Q9UKU0 697 aa20.6■□□□□ 0.89
PNKP-209ENST00000596726 ITPR1Q14643 2758 aa20.59■□□□□ 0.89
PNKP-209ENST00000596726 CD3EAPO15446 510 aaKnown RBP20.59■□□□□ 0.89
PNKP-209ENST00000596726 CSTF2P33240 577 aaKnown RBP eCLIP20.59■□□□□ 0.89
PNKP-209ENST00000596726 PPARGP37231 505 aaPredicted RBP20.59■□□□□ 0.89
PNKP-209ENST00000596726 CAPZBP47756 277 aa20.59■□□□□ 0.89
PNKP-209ENST00000596726 CD151P48509 253 aa20.59■□□□□ 0.89
PNKP-209ENST00000596726 GFERP55789 205 aa20.59■□□□□ 0.89
PNKP-209ENST00000596726 PTK6Q13882 451 aa20.59■□□□□ 0.89
PNKP-209ENST00000596726 AARS2Q5JTZ9 985 aaKnown RBP20.59■□□□□ 0.89
PNKP-209ENST00000596726 DUS1LQ6P1R4 473 aaKnown RBP20.59■□□□□ 0.89
PNKP-209ENST00000596726 LRRC69Q6ZNQ3 347 aa20.59■□□□□ 0.89
PNKP-209ENST00000596726 MPP5Q8N3R9 675 aa20.59■□□□□ 0.89
PNKP-209ENST00000596726 HNRNPLLQ8WVV9 542 aaKnown RBP20.59■□□□□ 0.89
PNKP-209ENST00000596726 USP7Q93009 1102 aa20.59■□□□□ 0.89
PNKP-209ENST00000596726 SERPINB12Q96P63 405 aa20.59■□□□□ 0.89
PNKP-209ENST00000596726 RAB33BQ9H082 229 aa20.59■□□□□ 0.89
PNKP-209ENST00000596726 XAB2Q9HCS7 855 aaKnown RBP20.59■□□□□ 0.89
PNKP-209ENST00000596726 AHCTF1Q8WYP5 2266 aa20.58■□□□□ 0.89
PNKP-209ENST00000596726 A8MU76 341 aa20.58■□□□□ 0.89
PNKP-209ENST00000596726 C9orf172C9J069 976 aa20.58■□□□□ 0.89
PNKP-209ENST00000596726 LIN7AO14910 233 aaPredicted RBP20.58■□□□□ 0.89
PNKP-209ENST00000596726 FTH1P02794 183 aa20.58■□□□□ 0.89
PNKP-209ENST00000596726 OR56A5P0C7T3 313 aa20.58■□□□□ 0.89
PNKP-209ENST00000596726 ITPKBP27987 946 aa20.58■□□□□ 0.89
PNKP-209ENST00000596726 PDHA2P29803 388 aa20.58■□□□□ 0.89
PNKP-209ENST00000596726 MAGEA3P43357 314 aa20.58■□□□□ 0.89
PNKP-209ENST00000596726 MAPK10P53779 464 aa20.58■□□□□ 0.89
PNKP-209ENST00000596726 PPP1R7Q15435 360 aa20.58■□□□□ 0.89
PNKP-209ENST00000596726 SNAP47Q5SQN1 464 aa20.58■□□□□ 0.89
PNKP-209ENST00000596726 RNASEH2BQ5TBB1 312 aaKnown RBP20.58■□□□□ 0.89
PNKP-209ENST00000596726 C19orf48Q6RUI8 117 aa20.58■□□□□ 0.89
PNKP-209ENST00000596726 CES3Q6UWW8 571 aa20.58■□□□□ 0.89
PNKP-209ENST00000596726 LDB1Q86U70 411 aaPredicted RBP20.58■□□□□ 0.89
PNKP-209ENST00000596726 SPACA3Q8IXA5 215 aa20.58■□□□□ 0.89
PNKP-209ENST00000596726 BMPERQ8N8U9 685 aa20.58■□□□□ 0.89
PNKP-209ENST00000596726 C9orf72Q96LT7 481 aa20.58■□□□□ 0.89
PNKP-209ENST00000596726 KIR3DX1Q9H7L2 352 aa20.58■□□□□ 0.89
PNKP-209ENST00000596726 OCIAD1Q9NX40 245 aa20.58■□□□□ 0.89
PNKP-209ENST00000596726 RNF14Q9UBS8 474 aa20.58■□□□□ 0.89
PNKP-209ENST00000596726 ANAPC5Q9UJX4 755 aa20.58■□□□□ 0.89
PNKP-209ENST00000596726 SSUH2Q9Y2M2 353 aa20.58■□□□□ 0.89
PNKP-209ENST00000596726 HEBP2Q9Y5Z4 205 aa20.58■□□□□ 0.89
PNKP-209ENST00000596726 COLEC10Q9Y6Z7 277 aa20.58■□□□□ 0.89
PNKP-209ENST00000596726 NBEAQ8NFP9 2946 aa20.58■□□□□ 0.88
PNKP-209ENST00000596726 SLC5A10A0PJK1 596 aa20.57■□□□□ 0.88
PNKP-209ENST00000596726 SDR42E2A6NKP2 422 aa20.57■□□□□ 0.88
PNKP-209ENST00000596726 B4E171 279 aa20.57■□□□□ 0.88
PNKP-209ENST00000596726 CAPN5O15484 640 aaPredicted RBP20.57■□□□□ 0.88
PNKP-209ENST00000596726 VAPBO95292 243 aa20.57■□□□□ 0.88
PNKP-209ENST00000596726 ANKRD34CP0C6C1 535 aa20.57■□□□□ 0.88
PNKP-209ENST00000596726 TSPAN7P41732 249 aa20.57■□□□□ 0.88
PNKP-209ENST00000596726 ARCN1P48444 511 aaKnown RBP20.57■□□□□ 0.88
PNKP-209ENST00000596726 TTPAP49638 278 aa20.57■□□□□ 0.88
PNKP-209ENST00000596726 KIAA0930Q6ICG6 404 aaPredicted RBP20.57■□□□□ 0.88
PNKP-209ENST00000596726 JAMLQ86YT9 394 aa20.57■□□□□ 0.88
PNKP-209ENST00000596726 PPIL6Q8IXY8 311 aa20.57■□□□□ 0.88
PNKP-209ENST00000596726 KCNE4Q8WWG9 221 aa20.57■□□□□ 0.88
PNKP-209ENST00000596726 JPH3Q8WXH2 748 aaPredicted RBP20.57■□□□□ 0.88
PNKP-209ENST00000596726 NAF1Q96HR8 494 aaKnown RBP20.57■□□□□ 0.88
PNKP-209ENST00000596726 TGM7Q96PF1 710 aa20.57■□□□□ 0.88
PNKP-209ENST00000596726 TAAR9Q96RI9 348 aa20.57■□□□□ 0.88
PNKP-209ENST00000596726 DPH1Q9BZG8 443 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms