RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 OR51F1A6NGY5 319 aa12.74□□□□□ -0.37
LIG1-212ENST00000596549 GOLGA6L6A8MZA4 724 aa12.74□□□□□ -0.37
LIG1-212ENST00000596549 TIAF1O95411 115 aa12.74□□□□□ -0.37
LIG1-212ENST00000596549 ITGB2P05107 769 aa12.74□□□□□ -0.37
LIG1-212ENST00000596549 SLC35G4P0C7Q5 338 aa12.74□□□□□ -0.37
LIG1-212ENST00000596549 ATP1B2P14415 290 aaPredicted RBP12.74□□□□□ -0.37
LIG1-212ENST00000596549 FOXN2P32314 431 aa12.74□□□□□ -0.37
LIG1-212ENST00000596549 GRIA1P42261 906 aa12.74□□□□□ -0.37
LIG1-212ENST00000596549 FOXM1Q08050 763 aa12.74□□□□□ -0.37
LIG1-212ENST00000596549 PLCL1Q15111 1095 aa12.74□□□□□ -0.37
LIG1-212ENST00000596549 DBN1Q16643 649 aa12.74□□□□□ -0.37
LIG1-212ENST00000596549 GPR33Q49SQ1 333 aa12.74□□□□□ -0.37
LIG1-212ENST00000596549 CCDC38Q502W7 563 aa12.74□□□□□ -0.37
LIG1-212ENST00000596549 ZRANB3Q5FWF4 1079 aa12.74□□□□□ -0.37
LIG1-212ENST00000596549 CACHD1Q5VU97 1274 aa12.74□□□□□ -0.37
LIG1-212ENST00000596549 CAPRIN2Q6IMN6 1127 aaKnown RBP12.74□□□□□ -0.37
LIG1-212ENST00000596549 CERS6Q6ZMG9 384 aa12.74□□□□□ -0.37
LIG1-212ENST00000596549 UNC5BQ8IZJ1 945 aa12.74□□□□□ -0.37
LIG1-212ENST00000596549 OR13J1Q8NGT2 312 aa12.74□□□□□ -0.37
LIG1-212ENST00000596549 LRRC45Q96CN5 670 aa12.74□□□□□ -0.37
LIG1-212ENST00000596549 MED8Q96G25 268 aa12.74□□□□□ -0.37
LIG1-212ENST00000596549 DCUN1D1Q96GG9 259 aa12.74□□□□□ -0.37
LIG1-212ENST00000596549 CDKN2AIPNLQ96HQ2 116 aa12.74□□□□□ -0.37
LIG1-212ENST00000596549 NRTNQ99748 197 aa12.74□□□□□ -0.37
LIG1-212ENST00000596549 MAP3K3Q99759 626 aa12.74□□□□□ -0.37
LIG1-212ENST00000596549 ZPBPQ9BS86 351 aa12.74□□□□□ -0.37
LIG1-212ENST00000596549 OR52A5Q9H2C5 316 aa12.74□□□□□ -0.37
LIG1-212ENST00000596549 KIR3DX1Q9H7L2 352 aa12.74□□□□□ -0.37
LIG1-212ENST00000596549 ETNK1Q9HBU6 452 aa12.74□□□□□ -0.37
LIG1-212ENST00000596549 SLC24A2Q9UI40 661 aa12.74□□□□□ -0.37
LIG1-212ENST00000596549 COL6A6A6NMZ7 2263 aa12.74□□□□□ -0.37
LIG1-212ENST00000596549 GOLGA6L3A6NEY3 463 aa12.73□□□□□ -0.37
LIG1-212ENST00000596549 SUN1O94901 812 aa12.73□□□□□ -0.37
LIG1-212ENST00000596549 POLBP06746 335 aa12.73□□□□□ -0.37
LIG1-212ENST00000596549 RALBP11234 206 aa12.73□□□□□ -0.37
LIG1-212ENST00000596549 PLA2G2AP14555 144 aa12.73□□□□□ -0.37
LIG1-212ENST00000596549 NELFEP18615 380 aaKnown RBP12.73□□□□□ -0.37
LIG1-212ENST00000596549 MSNP26038 577 aaKnown RBP12.73□□□□□ -0.37
LIG1-212ENST00000596549 STAT5AP42229 794 aa12.73□□□□□ -0.37
LIG1-212ENST00000596549 SEMA5AQ13591 1074 aa12.73□□□□□ -0.37
LIG1-212ENST00000596549 SNX1Q13596 522 aa12.73□□□□□ -0.37
LIG1-212ENST00000596549 MAP7Q14244 749 aa12.73□□□□□ -0.37
LIG1-212ENST00000596549 KCNAB1Q14722 419 aa12.73□□□□□ -0.37
LIG1-212ENST00000596549 TBR1Q16650 682 aa12.73□□□□□ -0.37
LIG1-212ENST00000596549 KCTD19Q17RG1 926 aaPredicted RBP12.73□□□□□ -0.37
LIG1-212ENST00000596549 ZNF662Q6ZS27 426 aa12.73□□□□□ -0.37
LIG1-212ENST00000596549 CFAP206Q8IYR0 622 aa12.73□□□□□ -0.37
LIG1-212ENST00000596549 CLDN19Q8N6F1 224 aa12.73□□□□□ -0.37
LIG1-212ENST00000596549 ZDHHC12Q96GR4 267 aa12.73□□□□□ -0.37
LIG1-212ENST00000596549 ELMO2Q96JJ3 720 aa12.73□□□□□ -0.37
LIG1-212ENST00000596549 SLC41A2Q96JW4 573 aa12.73□□□□□ -0.37
LIG1-212ENST00000596549 PPM1MQ96MI6 270 aa12.73□□□□□ -0.37
LIG1-212ENST00000596549 ZNF778Q96MU6 729 aa12.73□□□□□ -0.37
LIG1-212ENST00000596549 FRMD8P1Q9BZ68 369 aaPredicted RBP12.73□□□□□ -0.37
LIG1-212ENST00000596549 ULBP3Q9BZM4 244 aa12.73□□□□□ -0.37
LIG1-212ENST00000596549 LZTFL1Q9NQ48 299 aa12.73□□□□□ -0.37
LIG1-212ENST00000596549 SLC2A6Q9UGQ3 507 aa12.73□□□□□ -0.37
LIG1-212ENST00000596549 IL17BQ9UHF5 180 aa12.73□□□□□ -0.37
LIG1-212ENST00000596549 ACSL5Q9ULC5 683 aa12.73□□□□□ -0.37
LIG1-212ENST00000596549 PRSS21Q9Y6M0 314 aa12.73□□□□□ -0.37
LIG1-212ENST00000596549 FER1L5A0AVI2 2057 aa12.73□□□□□ -0.37
LIG1-212ENST00000596549 C17orf113A0A1B0GUU1 675 aa12.72□□□□□ -0.37
LIG1-212ENST00000596549 TLCD2A6NGC4 264 aa12.72□□□□□ -0.37
LIG1-212ENST00000596549 ERI2A8K979 691 aaKnown RBP12.72□□□□□ -0.37
LIG1-212ENST00000596549 CFAP99D6REC4 459 aa12.72□□□□□ -0.37
LIG1-212ENST00000596549 PSMD3O43242 534 aa12.72□□□□□ -0.37
LIG1-212ENST00000596549 IFNB1P01574 187 aa12.72□□□□□ -0.37
LIG1-212ENST00000596549 FAM87AP0C7U9 286 aa12.72□□□□□ -0.37
LIG1-212ENST00000596549 ZSCAN5DPP0CG00 497 aa12.72□□□□□ -0.37
LIG1-212ENST00000596549 FGF5P12034 268 aa12.72□□□□□ -0.37
LIG1-212ENST00000596549 FOLR1P15328 257 aa12.72□□□□□ -0.37
LIG1-212ENST00000596549 F8A1P23610 371 aa12.72□□□□□ -0.37
LIG1-212ENST00000596549 PDHA2P29803 388 aa12.72□□□□□ -0.37
LIG1-212ENST00000596549 STIP1P31948 543 aaKnown RBP12.72□□□□□ -0.37
LIG1-212ENST00000596549 FDFT1P37268 417 aa12.72□□□□□ -0.37
LIG1-212ENST00000596549 PREPP48147 710 aa12.72□□□□□ -0.37
LIG1-212ENST00000596549 ARCN1P48444 511 aaKnown RBP12.72□□□□□ -0.37
LIG1-212ENST00000596549 ACVR1Q04771 509 aa12.72□□□□□ -0.37
LIG1-212ENST00000596549 CACNG1Q06432 222 aa12.72□□□□□ -0.37
LIG1-212ENST00000596549 ABHD18Q0P651 414 aa12.72□□□□□ -0.37
LIG1-212ENST00000596549 CDH17Q12864 832 aa12.72□□□□□ -0.37
LIG1-212ENST00000596549 FBXO38Q6PIJ6 1188 aa12.72□□□□□ -0.37
LIG1-212ENST00000596549 LINC00523Q86TU6 105 aa12.72□□□□□ -0.37
LIG1-212ENST00000596549 OOSP2Q86WS3 158 aa12.72□□□□□ -0.37
LIG1-212ENST00000596549 LRRC8AQ8IWT6 810 aa12.72□□□□□ -0.37
LIG1-212ENST00000596549 ZSCAN1Q8NBB4 408 aa12.72□□□□□ -0.37
LIG1-212ENST00000596549 HEXDCQ8WVB3 486 aa12.72□□□□□ -0.37
LIG1-212ENST00000596549 SLC45A3Q96JT2 553 aa12.72□□□□□ -0.37
LIG1-212ENST00000596549 GPN2Q9H9Y4 310 aaPredicted RBP12.72□□□□□ -0.37
LIG1-212ENST00000596549 CASS4Q9NQ75 786 aa12.72□□□□□ -0.37
LIG1-212ENST00000596549 ZNF148Q9UQR1 794 aa12.72□□□□□ -0.37
LIG1-212ENST00000596549 MRPS18BQ9Y676 258 aaKnown RBP12.72□□□□□ -0.37
LIG1-212ENST00000596549 CCDC162PA2VCL2 907 aa12.71□□□□□ -0.37
LIG1-212ENST00000596549 OR6C74A6NCV1 312 aa12.71□□□□□ -0.37
LIG1-212ENST00000596549 TERTO14746 1132 aaKnown RBP12.71□□□□□ -0.37
LIG1-212ENST00000596549 KIAA0754O94854 1291 aa12.71□□□□□ -0.37
LIG1-212ENST00000596549 CCDC175P0C221 793 aa12.71□□□□□ -0.37
LIG1-212ENST00000596549 EBLN1P0CF75 366 aa12.71□□□□□ -0.37
LIG1-212ENST00000596549 ITGB6P18564 788 aa12.71□□□□□ -0.37
LIG1-212ENST00000596549 MAP4P27816 1152 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms