RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.75□□□□□ -0.37
USE1-207ENST00000596136 OR51F1A6NGY5 319 aa12.75□□□□□ -0.37
USE1-207ENST00000596136 A8MU76 341 aa12.75□□□□□ -0.37
USE1-207ENST00000596136 AP3B1O00203 1094 aa12.75□□□□□ -0.37
USE1-207ENST00000596136 AGRPO00253 132 aa12.75□□□□□ -0.37
USE1-207ENST00000596136 ZSCAN12O43309 604 aa12.75□□□□□ -0.37
USE1-207ENST00000596136 TPSB2P20231 275 aa12.75□□□□□ -0.37
USE1-207ENST00000596136 MAGEA6P43360 314 aa12.75□□□□□ -0.37
USE1-207ENST00000596136 MAPK9P45984 424 aa12.75□□□□□ -0.37
USE1-207ENST00000596136 CD151P48509 253 aa12.75□□□□□ -0.37
USE1-207ENST00000596136 NPY2RP49146 381 aa12.75□□□□□ -0.37
USE1-207ENST00000596136 CXADRP78310 365 aa12.75□□□□□ -0.37
USE1-207ENST00000596136 RPA4Q13156 261 aa12.75□□□□□ -0.37
USE1-207ENST00000596136 TGIF1Q15583 401 aa12.75□□□□□ -0.37
USE1-207ENST00000596136 TPSAB1Q15661 275 aa12.75□□□□□ -0.37
USE1-207ENST00000596136 CYP1B1Q16678 543 aa12.75□□□□□ -0.37
USE1-207ENST00000596136 SOWAHCQ53LP3 525 aaPredicted RBP12.75□□□□□ -0.37
USE1-207ENST00000596136 PCID2Q5JVF3 399 aa12.75□□□□□ -0.37
USE1-207ENST00000596136 SNAP47Q5SQN1 464 aa12.75□□□□□ -0.37
USE1-207ENST00000596136 DCAF12Q5T6F0 453 aa12.75□□□□□ -0.37
USE1-207ENST00000596136 LYPLAL1Q5VWZ2 237 aa12.75□□□□□ -0.37
USE1-207ENST00000596136 CERS6Q6ZMG9 384 aa12.75□□□□□ -0.37
USE1-207ENST00000596136 ZNF534Q76KX8 674 aa12.75□□□□□ -0.37
USE1-207ENST00000596136 GSTA5Q7RTV2 222 aa12.75□□□□□ -0.37
USE1-207ENST00000596136 CLDN19Q8N6F1 224 aa12.75□□□□□ -0.37
USE1-207ENST00000596136 LSM14AQ8ND56 463 aaKnown RBP12.75□□□□□ -0.37
USE1-207ENST00000596136 SPDYE1Q8NFV5 336 aaPredicted RBP12.75□□□□□ -0.37
USE1-207ENST00000596136 KLHL6Q8WZ60 621 aa12.75□□□□□ -0.37
USE1-207ENST00000596136 PMEPA1Q969W9 287 aa12.75□□□□□ -0.37
USE1-207ENST00000596136 RMDN2Q96LZ7 410 aa12.75□□□□□ -0.37
USE1-207ENST00000596136 UBL7Q96S82 380 aaPredicted RBP12.75□□□□□ -0.37
USE1-207ENST00000596136 ZPBPQ9BS86 351 aa12.75□□□□□ -0.37
USE1-207ENST00000596136 OR52A5Q9H2C5 316 aa12.75□□□□□ -0.37
USE1-207ENST00000596136 ZNF768Q9H5H4 540 aaKnown RBP12.75□□□□□ -0.37
USE1-207ENST00000596136 KIR3DX1Q9H7L2 352 aa12.75□□□□□ -0.37
USE1-207ENST00000596136 COG4Q9H9E3 785 aa12.75□□□□□ -0.37
USE1-207ENST00000596136 VPS37BQ9H9H4 285 aa12.75□□□□□ -0.37
USE1-207ENST00000596136 CPNE5Q9HCH3 593 aa12.75□□□□□ -0.37
USE1-207ENST00000596136 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.75□□□□□ -0.37
USE1-207ENST00000596136 HEBP2Q9Y5Z4 205 aa12.75□□□□□ -0.37
USE1-207ENST00000596136 STMND1H3BQB6 276 aa12.74□□□□□ -0.37
USE1-207ENST00000596136 QSOX1O00391 747 aa12.74□□□□□ -0.37
USE1-207ENST00000596136 CES2O00748 559 aa12.74□□□□□ -0.37
USE1-207ENST00000596136 GOT2P00505 430 aaKnown RBP12.74□□□□□ -0.37
USE1-207ENST00000596136 POLBP06746 335 aa12.74□□□□□ -0.37
USE1-207ENST00000596136 SLC35G4P0C7Q5 338 aa12.74□□□□□ -0.37
USE1-207ENST00000596136 NDUFS1P28331 727 aa12.74□□□□□ -0.37
USE1-207ENST00000596136 LEPRP48357 1165 aaKnown RBP12.74□□□□□ -0.37
USE1-207ENST00000596136 PPM1FP49593 454 aaPredicted RBP12.74□□□□□ -0.37
USE1-207ENST00000596136 ARMC3Q5W041 872 aa12.74□□□□□ -0.37
USE1-207ENST00000596136 TTC27Q6P3X3 843 aa12.74□□□□□ -0.37
USE1-207ENST00000596136 LRRC8BQ6P9F7 803 aa12.74□□□□□ -0.37
USE1-207ENST00000596136 KLHL35Q6PF15 583 aa12.74□□□□□ -0.37
USE1-207ENST00000596136 AFTPHQ6ULP2 937 aa12.74□□□□□ -0.37
USE1-207ENST00000596136 FAM129CQ86XR2 697 aa12.74□□□□□ -0.37
USE1-207ENST00000596136 OR4L1Q8NH43 312 aa12.74□□□□□ -0.37
USE1-207ENST00000596136 ACTRT1Q8TDG2 376 aa12.74□□□□□ -0.37
USE1-207ENST00000596136 ZDHHC12Q96GR4 267 aa12.74□□□□□ -0.37
USE1-207ENST00000596136 MS4A14Q96JA4 679 aa12.74□□□□□ -0.37
USE1-207ENST00000596136 C12orf66Q96MD2 445 aa12.74□□□□□ -0.37
USE1-207ENST00000596136 TGM7Q96PF1 710 aa12.74□□□□□ -0.37
USE1-207ENST00000596136 BBC3Q96PG8 261 aaPredicted RBP12.74□□□□□ -0.37
USE1-207ENST00000596136 NAP1L3Q99457 506 aaPredicted RBP12.74□□□□□ -0.37
USE1-207ENST00000596136 IL22Q9GZX6 179 aa12.74□□□□□ -0.37
USE1-207ENST00000596136 ZMYND15Q9H091 742 aa12.74□□□□□ -0.37
USE1-207ENST00000596136 CHRAC1Q9NRG0 131 aa12.74□□□□□ -0.37
USE1-207ENST00000596136 TREX1Q9NSU2 369 aa12.74□□□□□ -0.37
USE1-207ENST00000596136 IMP3Q9NV31 184 aaKnown RBP12.74□□□□□ -0.37
USE1-207ENST00000596136 SMARCAL1Q9NZC9 954 aa12.74□□□□□ -0.37
USE1-207ENST00000596136 SLC24A2Q9UI40 661 aa12.74□□□□□ -0.37
USE1-207ENST00000596136 PILRAQ9UKJ1 303 aa12.74□□□□□ -0.37
USE1-207ENST00000596136 NEU2Q9Y3R4 380 aa12.74□□□□□ -0.37
USE1-207ENST00000596136 CFAP20Q9Y6A4 193 aaKnown RBP12.74□□□□□ -0.37
USE1-207ENST00000596136 PRSS21Q9Y6M0 314 aa12.74□□□□□ -0.37
USE1-207ENST00000596136 COLEC10Q9Y6Z7 277 aa12.74□□□□□ -0.37
USE1-207ENST00000596136 KALRNO60229 2985 aa12.74□□□□□ -0.37
USE1-207ENST00000596136 CCDC78A2IDD5 438 aa12.73□□□□□ -0.37
USE1-207ENST00000596136 LIN7AO14910 233 aaPredicted RBP12.73□□□□□ -0.37
USE1-207ENST00000596136 KIF1CO43896 1103 aaKnown RBP12.73□□□□□ -0.37
USE1-207ENST00000596136 COILP38432 576 aaPredicted RBP12.73□□□□□ -0.37
USE1-207ENST00000596136 BASP1P80723 227 aaKnown RBP12.73□□□□□ -0.37
USE1-207ENST00000596136 KCNJ11Q14654 390 aa12.73□□□□□ -0.37
USE1-207ENST00000596136 ARHGAP40Q5TG30 622 aa12.73□□□□□ -0.37
USE1-207ENST00000596136 ANKS6Q68DC2 871 aa12.73□□□□□ -0.37
USE1-207ENST00000596136 CEACAM20Q6UY09 585 aa12.73□□□□□ -0.37
USE1-207ENST00000596136 CCDC81Q6ZN84 652 aa12.73□□□□□ -0.37
USE1-207ENST00000596136 SLC35F6Q8N357 371 aa12.73□□□□□ -0.37
USE1-207ENST00000596136 PPHLN1Q8NEY8 458 aaKnown RBP12.73□□□□□ -0.37
USE1-207ENST00000596136 NKD1Q969G9 470 aa12.73□□□□□ -0.37
USE1-207ENST00000596136 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.73□□□□□ -0.37
USE1-207ENST00000596136 WBP1Q96G27 269 aa12.73□□□□□ -0.37
USE1-207ENST00000596136 SLC41A2Q96JW4 573 aa12.73□□□□□ -0.37
USE1-207ENST00000596136 OSBPL9Q96SU4 736 aa12.73□□□□□ -0.37
USE1-207ENST00000596136 KIFC1Q9BW19 673 aa12.73□□□□□ -0.37
USE1-207ENST00000596136 MRM3Q9HC36 420 aaKnown RBP12.73□□□□□ -0.37
USE1-207ENST00000596136 BFARQ9NZS9 450 aa12.73□□□□□ -0.37
USE1-207ENST00000596136 KLHL3Q9UH77 587 aa12.73□□□□□ -0.37
USE1-207ENST00000596136 TMEM184BQ9Y519 407 aaPredicted RBP12.73□□□□□ -0.37
USE1-207ENST00000596136 PCDHB11Q9Y5F2 797 aa12.73□□□□□ -0.37
USE1-207ENST00000596136 TCRBV7S3A2A0A539 114 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms