RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 CDH6P55285 790 aa13.4□□□□□ -0.26
SHKBP1-208ENST00000595726 FOXL2P58012 376 aa13.4□□□□□ -0.26
SHKBP1-208ENST00000595726 DSC2Q02487 901 aa13.4□□□□□ -0.26
SHKBP1-208ENST00000595726 NCF4Q15080 339 aa13.4□□□□□ -0.26
SHKBP1-208ENST00000595726 HADHQ16836 314 aaKnown RBP13.4□□□□□ -0.26
SHKBP1-208ENST00000595726 KHDC1Q4VXA5 237 aaKnown RBP13.4□□□□□ -0.26
SHKBP1-208ENST00000595726 RALGPS1Q5JS13 557 aa13.4□□□□□ -0.26
SHKBP1-208ENST00000595726 DCAF10Q5QP82 559 aa13.4□□□□□ -0.26
SHKBP1-208ENST00000595726 TMCO3Q6UWJ1 677 aa13.4□□□□□ -0.26
SHKBP1-208ENST00000595726 SPNS3Q6ZMD2 512 aa13.4□□□□□ -0.26
SHKBP1-208ENST00000595726 MRGPREQ86SM8 312 aa13.4□□□□□ -0.26
SHKBP1-208ENST00000595726 KMT5CQ86Y97 462 aa13.4□□□□□ -0.26
SHKBP1-208ENST00000595726 PARP9Q8IXQ6 854 aa13.4□□□□□ -0.26
SHKBP1-208ENST00000595726 RBM12BQ8IXT5 1001 aaKnown RBP13.4□□□□□ -0.26
SHKBP1-208ENST00000595726 SYTL1Q8IYJ3 562 aa13.4□□□□□ -0.26
SHKBP1-208ENST00000595726 BBS5Q8N3I7 341 aa13.4□□□□□ -0.26
SHKBP1-208ENST00000595726 TC2NQ8N9U0 490 aa13.4□□□□□ -0.26
SHKBP1-208ENST00000595726 CLEC1AQ8NC01 280 aa13.4□□□□□ -0.26
SHKBP1-208ENST00000595726 LPCAT1Q8NF37 534 aa13.4□□□□□ -0.26
SHKBP1-208ENST00000595726 FAR1Q8WVX9 515 aa13.4□□□□□ -0.26
SHKBP1-208ENST00000595726 ITLN2Q8WWU7 325 aaPredicted RBP13.4□□□□□ -0.26
SHKBP1-208ENST00000595726 CPT1BQ92523 772 aa13.4□□□□□ -0.26
SHKBP1-208ENST00000595726 EID2BQ96D98 161 aa13.4□□□□□ -0.26
SHKBP1-208ENST00000595726 TRAPPC9Q96Q05 1148 aa13.4□□□□□ -0.26
SHKBP1-208ENST00000595726 SPATA16Q9BXB7 569 aa13.4□□□□□ -0.26
SHKBP1-208ENST00000595726 TLR10Q9BXR5 811 aa13.4□□□□□ -0.26
SHKBP1-208ENST00000595726 LCMT1Q9UIC8 334 aa13.4□□□□□ -0.26
SHKBP1-208ENST00000595726 NOVA2Q9UNW9 492 aaKnown RBP13.4□□□□□ -0.26
SHKBP1-208ENST00000595726 ABCA2Q9BZC7 2435 aa13.4□□□□□ -0.26
SHKBP1-208ENST00000595726 A0A1B0GUH1 482 aa13.39□□□□□ -0.27
SHKBP1-208ENST00000595726 TLCD2A6NGC4 264 aa13.39□□□□□ -0.27
SHKBP1-208ENST00000595726 KLF7O75840 302 aaPredicted RBP13.39□□□□□ -0.27
SHKBP1-208ENST00000595726 EDN3P14138 238 aa13.39□□□□□ -0.27
SHKBP1-208ENST00000595726 COX6B1P14854 86 aa13.39□□□□□ -0.27
SHKBP1-208ENST00000595726 IDSP22304 550 aa13.39□□□□□ -0.27
SHKBP1-208ENST00000595726 HTR1EP28566 365 aa13.39□□□□□ -0.27
SHKBP1-208ENST00000595726 TAS2R40P59535 323 aa13.39□□□□□ -0.27
SHKBP1-208ENST00000595726 MMRN1Q13201 1228 aa13.39□□□□□ -0.27
SHKBP1-208ENST00000595726 DPYSL3Q14195 570 aa13.39□□□□□ -0.27
SHKBP1-208ENST00000595726 KRT81Q14533 505 aa13.39□□□□□ -0.27
SHKBP1-208ENST00000595726 ATP13A4Q4VNC1 1196 aa13.39□□□□□ -0.27
SHKBP1-208ENST00000595726 AGAP9Q5VTM2 703 aa13.39□□□□□ -0.27
SHKBP1-208ENST00000595726 LRRTM4Q86VH4 590 aa13.39□□□□□ -0.27
SHKBP1-208ENST00000595726 GAS2L3Q86XJ1 694 aa13.39□□□□□ -0.27
SHKBP1-208ENST00000595726 RAB43Q86YS6 212 aa13.39□□□□□ -0.27
SHKBP1-208ENST00000595726 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.39□□□□□ -0.27
SHKBP1-208ENST00000595726 GPR26Q8NDV2 337 aa13.39□□□□□ -0.27
SHKBP1-208ENST00000595726 SLC35G2Q8TBE7 412 aa13.39□□□□□ -0.27
SHKBP1-208ENST00000595726 NSMCE1Q8WV22 266 aa13.39□□□□□ -0.27
SHKBP1-208ENST00000595726 HRASLS2Q9NWW9 162 aa13.39□□□□□ -0.27
SHKBP1-208ENST00000595726 SOHLH2Q9NX45 425 aa13.39□□□□□ -0.27
SHKBP1-208ENST00000595726 PSMD13Q9UNM6 376 aa13.39□□□□□ -0.27
SHKBP1-208ENST00000595726 KLF2Q9Y5W3 355 aaPredicted RBP13.39□□□□□ -0.27
SHKBP1-208ENST00000595726 PRICKLE3O43900 615 aaPredicted RBP13.38□□□□□ -0.27
SHKBP1-208ENST00000595726 SERPINB6P35237 376 aa13.38□□□□□ -0.27
SHKBP1-208ENST00000595726 ZNF75DP51815 510 aa13.38□□□□□ -0.27
SHKBP1-208ENST00000595726 KCNK10P57789 538 aa13.38□□□□□ -0.27
SHKBP1-208ENST00000595726 PLCL1Q15111 1095 aa13.38□□□□□ -0.27
SHKBP1-208ENST00000595726 ANKRD20A8PQ5CZ79 823 aa13.38□□□□□ -0.27
SHKBP1-208ENST00000595726 ZNF569Q5MCW4 686 aa13.38□□□□□ -0.27
SHKBP1-208ENST00000595726 DUS1LQ6P1R4 473 aaKnown RBP13.38□□□□□ -0.27
SHKBP1-208ENST00000595726 WASH2PQ6VEQ5 465 aa13.38□□□□□ -0.27
SHKBP1-208ENST00000595726 C11orf96Q7Z7L8 435 aa13.38□□□□□ -0.27
SHKBP1-208ENST00000595726 RHOT2Q8IXI1 618 aa13.38□□□□□ -0.27
SHKBP1-208ENST00000595726 NXPE1Q8N323 547 aa13.38□□□□□ -0.27
SHKBP1-208ENST00000595726 ATPAF2Q8N5M1 289 aa13.38□□□□□ -0.27
SHKBP1-208ENST00000595726 TEX26Q8N6G2 289 aa13.38□□□□□ -0.27
SHKBP1-208ENST00000595726 OR8K5Q8NH50 307 aa13.38□□□□□ -0.27
SHKBP1-208ENST00000595726 OR1L3Q8NH93 324 aa13.38□□□□□ -0.27
SHKBP1-208ENST00000595726 TM9SF4Q92544 642 aa13.38□□□□□ -0.27
SHKBP1-208ENST00000595726 MRFAP1L1Q96HT8 127 aa13.38□□□□□ -0.27
SHKBP1-208ENST00000595726 FER1L6-AS2Q96M78 137 aa13.38□□□□□ -0.27
SHKBP1-208ENST00000595726 WDR77Q9BQA1 342 aaPredicted RBP13.38□□□□□ -0.27
SHKBP1-208ENST00000595726 ZNF670Q9BS34 389 aa13.38□□□□□ -0.27
SHKBP1-208ENST00000595726 TIMM29Q9BSF4 260 aa13.38□□□□□ -0.27
SHKBP1-208ENST00000595726 TDRD1Q9BXT4 1180 aaKnown RBP13.38□□□□□ -0.27
SHKBP1-208ENST00000595726 ACTR5Q9H9F9 607 aaPredicted RBP13.38□□□□□ -0.27
SHKBP1-208ENST00000595726 LATS2Q9NRM7 1088 aa13.38□□□□□ -0.27
SHKBP1-208ENST00000595726 PKD2L2Q9NZM6 624 aa13.38□□□□□ -0.27
SHKBP1-208ENST00000595726 SEC16AO15027 2179 aa13.38□□□□□ -0.27
SHKBP1-208ENST00000595726 CNTRLQ7Z7A1 2325 aa13.38□□□□□ -0.27
SHKBP1-208ENST00000595726 CCDC78A2IDD5 438 aa13.37□□□□□ -0.27
SHKBP1-208ENST00000595726 OR6C74A6NCV1 312 aa13.37□□□□□ -0.27
SHKBP1-208ENST00000595726 OR5K3A6NET4 321 aa13.37□□□□□ -0.27
SHKBP1-208ENST00000595726 MFSD11O43934 449 aa13.37□□□□□ -0.27
SHKBP1-208ENST00000595726 CDK14O94921 469 aa13.37□□□□□ -0.27
SHKBP1-208ENST00000595726 ZBTB11O95625 1053 aaPredicted RBP13.37□□□□□ -0.27
SHKBP1-208ENST00000595726 HOXB4P17483 251 aaPredicted RBP13.37□□□□□ -0.27
SHKBP1-208ENST00000595726 KPNA2P52292 529 aaKnown RBP13.37□□□□□ -0.27
SHKBP1-208ENST00000595726 NIPAL4Q0D2K0 466 aa13.37□□□□□ -0.27
SHKBP1-208ENST00000595726 CDC16Q13042 620 aa13.37□□□□□ -0.27
SHKBP1-208ENST00000595726 MESDQ14696 234 aa13.37□□□□□ -0.27
SHKBP1-208ENST00000595726 RPE65Q16518 533 aa13.37□□□□□ -0.27
SHKBP1-208ENST00000595726 QPCTQ16769 361 aa13.37□□□□□ -0.27
SHKBP1-208ENST00000595726 ZNF789Q5FWF6 425 aa13.37□□□□□ -0.27
SHKBP1-208ENST00000595726 FAM182AQ5T1J6 154 aa13.37□□□□□ -0.27
SHKBP1-208ENST00000595726 TMTC4Q5T4D3 741 aa13.37□□□□□ -0.27
SHKBP1-208ENST00000595726 MLIPQ5VWP3 458 aa13.37□□□□□ -0.27
SHKBP1-208ENST00000595726 NCBP2-AS2Q69YL0 99 aa13.37□□□□□ -0.27
SHKBP1-208ENST00000595726 KLHL35Q6PF15 583 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms