RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 CREB1P16220 341 aa12.68□□□□□ -0.38
SCAF1-202ENST00000595242 DRD4P21917 467 aa12.68□□□□□ -0.38
SCAF1-202ENST00000595242 CD1CP29017 333 aa12.68□□□□□ -0.38
SCAF1-202ENST00000595242 MSH2P43246 934 aa12.68□□□□□ -0.38
SCAF1-202ENST00000595242 SEC24CP53992 1094 aa12.68□□□□□ -0.38
SCAF1-202ENST00000595242 RAB15P59190 212 aa12.68□□□□□ -0.38
SCAF1-202ENST00000595242 FRG1Q14331 258 aaKnown RBP12.68□□□□□ -0.38
SCAF1-202ENST00000595242 EFTUD2Q15029 972 aaKnown RBP eCLIP12.68□□□□□ -0.381e-8■■■■□ 22.8
SCAF1-202ENST00000595242 WSCD2Q2TBF2 565 aa12.68□□□□□ -0.38
SCAF1-202ENST00000595242 TEX44Q53QW1 395 aa12.68□□□□□ -0.38
SCAF1-202ENST00000595242 UNC5AQ6ZN44 842 aa12.68□□□□□ -0.38
SCAF1-202ENST00000595242 CAPN12Q6ZSI9 719 aa12.68□□□□□ -0.38
SCAF1-202ENST00000595242 KDELC2Q7Z4H8 507 aa12.68□□□□□ -0.38
SCAF1-202ENST00000595242 GSDMBQ8TAX9 411 aa12.68□□□□□ -0.38
SCAF1-202ENST00000595242 PRR7Q8TB68 274 aa12.68□□□□□ -0.38
SCAF1-202ENST00000595242 DENND1AQ8TEH3 1009 aa12.68□□□□□ -0.38
SCAF1-202ENST00000595242 ALKBH8Q96BT7 664 aaKnown RBP12.68□□□□□ -0.38
SCAF1-202ENST00000595242 CHMP6Q96FZ7 201 aa12.68□□□□□ -0.38
SCAF1-202ENST00000595242 TEKT5Q96M29 485 aa12.68□□□□□ -0.38
SCAF1-202ENST00000595242 WDR92Q96MX6 357 aa12.68□□□□□ -0.38
SCAF1-202ENST00000595242 KLHL32Q96NJ5 620 aa12.68□□□□□ -0.38
SCAF1-202ENST00000595242 NAT9Q9BTE0 207 aa12.68□□□□□ -0.38
SCAF1-202ENST00000595242 SPRY4Q9C004 299 aa12.68□□□□□ -0.38
SCAF1-202ENST00000595242 TRABDQ9H4I3 376 aa12.68□□□□□ -0.38
SCAF1-202ENST00000595242 ATP13A1Q9HD20 1204 aa12.68□□□□□ -0.38
SCAF1-202ENST00000595242 PPANQ9NQ55 473 aaKnown RBP12.68□□□□□ -0.38
SCAF1-202ENST00000595242 MPP6Q9NZW5 540 aa12.68□□□□□ -0.38
SCAF1-202ENST00000595242 KLHL8Q9P2G9 620 aaPredicted RBP12.68□□□□□ -0.38
SCAF1-202ENST00000595242 TBK1Q9UHD2 729 aa12.68□□□□□ -0.38
SCAF1-202ENST00000595242 COQ6Q9Y2Z9 468 aa12.68□□□□□ -0.38
SCAF1-202ENST00000595242 B4E171 279 aa12.67□□□□□ -0.38
SCAF1-202ENST00000595242 PSMD3O43242 534 aa12.67□□□□□ -0.38
SCAF1-202ENST00000595242 TYROBPO43914 113 aa12.67□□□□□ -0.38
SCAF1-202ENST00000595242 MPSTP25325 297 aa12.67□□□□□ -0.38
SCAF1-202ENST00000595242 GRNP28799 593 aaKnown RBP12.67□□□□□ -0.38
SCAF1-202ENST00000595242 CD68P34810 354 aaPredicted RBP12.67□□□□□ -0.38
SCAF1-202ENST00000595242 TSPAN7P41732 249 aa12.67□□□□□ -0.38
SCAF1-202ENST00000595242 MAZP56270 477 aaKnown RBP12.67□□□□□ -0.38
SCAF1-202ENST00000595242 ABHD18Q0P651 414 aa12.67□□□□□ -0.38
SCAF1-202ENST00000595242 ZBTB17Q13105 803 aa12.67□□□□□ -0.38
SCAF1-202ENST00000595242 NAB1Q13506 487 aa12.67□□□□□ -0.38
SCAF1-202ENST00000595242 MPP2Q14168 576 aa12.67□□□□□ -0.38
SCAF1-202ENST00000595242 KBTBD12Q3ZCT8 623 aa12.67□□□□□ -0.38
SCAF1-202ENST00000595242 PID1Q7Z2X4 250 aa12.67□□□□□ -0.38
SCAF1-202ENST00000595242 TIPARPQ7Z3E1 657 aaKnown RBP12.67□□□□□ -0.38
SCAF1-202ENST00000595242 ZNF438Q7Z4V0 828 aa12.67□□□□□ -0.38
SCAF1-202ENST00000595242 SLC26A11Q86WA9 606 aa12.67□□□□□ -0.38
SCAF1-202ENST00000595242 PLPP6Q8IY26 295 aa12.67□□□□□ -0.38
SCAF1-202ENST00000595242 UMODL1-AS1Q8N2C9 162 aa12.67□□□□□ -0.38
SCAF1-202ENST00000595242 OR4D9Q8NGE8 314 aa12.67□□□□□ -0.38
SCAF1-202ENST00000595242 CCL4L1Q8NHW4 92 aa12.67□□□□□ -0.38
SCAF1-202ENST00000595242 CKAP2Q8WWK9 683 aa12.67□□□□□ -0.38
SCAF1-202ENST00000595242 VOPP1Q96AW1 172 aa12.67□□□□□ -0.38
SCAF1-202ENST00000595242 ISG20Q96AZ6 181 aaKnown RBP12.67□□□□□ -0.38
SCAF1-202ENST00000595242 MOCOSQ96EN8 888 aa12.67□□□□□ -0.38
SCAF1-202ENST00000595242 STAMBPL1Q96FJ0 436 aa12.67□□□□□ -0.38
SCAF1-202ENST00000595242 PPP1R2P1Q96PQ5 205 aa12.67□□□□□ -0.38
SCAF1-202ENST00000595242 TEFMQ96QE5 360 aaKnown RBP12.67□□□□□ -0.38
SCAF1-202ENST00000595242 OSBPL1AQ9BXW6 950 aa12.67□□□□□ -0.38
SCAF1-202ENST00000595242 TMEM168Q9H0V1 697 aa12.67□□□□□ -0.38
SCAF1-202ENST00000595242 MRPL40Q9NQ50 206 aaKnown RBP12.67□□□□□ -0.38
SCAF1-202ENST00000595242 MOCS1Q9NZB8 636 aa12.67□□□□□ -0.38
SCAF1-202ENST00000595242 TLK1Q9UKI8 766 aa12.67□□□□□ -0.38
SCAF1-202ENST00000595242 MAP4K5Q9Y4K4 846 aa12.67□□□□□ -0.38
SCAF1-202ENST00000595242 MRPS18BQ9Y676 258 aaKnown RBP12.67□□□□□ -0.38
SCAF1-202ENST00000595242 IQANK1A0A1B0GTG1 560 aa12.66□□□□□ -0.38
SCAF1-202ENST00000595242 ILVBLA1L0T0 632 aa12.66□□□□□ -0.38
SCAF1-202ENST00000595242 TMEM202A6NGA9 273 aa12.66□□□□□ -0.38
SCAF1-202ENST00000595242 SDR42E2A6NKP2 422 aa12.66□□□□□ -0.38
SCAF1-202ENST00000595242 DRGXA6NNA5 263 aa12.66□□□□□ -0.38
SCAF1-202ENST00000595242 TCP11X1B4DZS4 312 aa12.66□□□□□ -0.38
SCAF1-202ENST00000595242 KCNK1O00180 336 aa12.66□□□□□ -0.38
SCAF1-202ENST00000595242 AP3B1O00203 1094 aa12.66□□□□□ -0.38
SCAF1-202ENST00000595242 MAFKO60675 156 aa12.66□□□□□ -0.38
SCAF1-202ENST00000595242 POP4O95707 220 aaKnown RBP12.66□□□□□ -0.38
SCAF1-202ENST00000595242 CD160O95971 181 aa12.66□□□□□ -0.38
SCAF1-202ENST00000595242 PDGFAP04085 211 aa12.66□□□□□ -0.38
SCAF1-202ENST00000595242 THRAP10827 490 aa12.66□□□□□ -0.38
SCAF1-202ENST00000595242 TIMP2P16035 220 aa12.66□□□□□ -0.38
SCAF1-202ENST00000595242 RHOQP17081 205 aa12.66□□□□□ -0.38
SCAF1-202ENST00000595242 PGAM1P18669 254 aa12.66□□□□□ -0.38
SCAF1-202ENST00000595242 KRT15P19012 456 aa12.66□□□□□ -0.38
SCAF1-202ENST00000595242 GRIA1P42261 906 aa12.66□□□□□ -0.38
SCAF1-202ENST00000595242 CCT5P48643 541 aa12.66□□□□□ -0.38
SCAF1-202ENST00000595242 NDST2P52849 883 aa12.66□□□□□ -0.38
SCAF1-202ENST00000595242 MRPL49Q13405 166 aaKnown RBP12.66□□□□□ -0.38
SCAF1-202ENST00000595242 NR1D2Q14995 579 aa12.66□□□□□ -0.38
SCAF1-202ENST00000595242 NKAIN2Q5VXU1 208 aa12.66□□□□□ -0.38
SCAF1-202ENST00000595242 ARMC3Q5W041 872 aa12.66□□□□□ -0.38
SCAF1-202ENST00000595242 TIGD7Q6NT04 549 aaPredicted RBP12.66□□□□□ -0.38
SCAF1-202ENST00000595242 ZNF783Q6ZMS7 281 aa12.66□□□□□ -0.38
SCAF1-202ENST00000595242 RGS9BPQ6ZS82 235 aa12.66□□□□□ -0.38
SCAF1-202ENST00000595242 MARK2Q7KZI7 788 aaKnown RBP12.66□□□□□ -0.38
SCAF1-202ENST00000595242 LRRC6Q86X45 466 aa12.66□□□□□ -0.38
SCAF1-202ENST00000595242 MPP5Q8N3R9 675 aa12.66□□□□□ -0.38
SCAF1-202ENST00000595242 BMPERQ8N8U9 685 aa12.66□□□□□ -0.38
SCAF1-202ENST00000595242 OR1E3Q8WZA6 343 aa12.66□□□□□ -0.38
SCAF1-202ENST00000595242 CFAP36Q96G28 342 aa12.66□□□□□ -0.38
SCAF1-202ENST00000595242 SMC6Q96SB8 1091 aa12.66□□□□□ -0.38
SCAF1-202ENST00000595242 CTRCQ99895 268 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms