RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 FRG1Q14331 258 aaKnown RBP25.22■■□□□ 1.63
TRIM28-204ENST00000594806 RPE65Q16518 533 aa25.22■■□□□ 1.63
TRIM28-204ENST00000594806 CAPRIN2Q6IMN6 1127 aaKnown RBP25.22■■□□□ 1.63
TRIM28-204ENST00000594806 TMEM26Q6ZUK4 368 aa25.22■■□□□ 1.63
TRIM28-204ENST00000594806 OR10G6Q8NH81 332 aa25.22■■□□□ 1.63
TRIM28-204ENST00000594806 ELMO1Q92556 727 aa25.22■■□□□ 1.63
TRIM28-204ENST00000594806 ART4Q93070 314 aa25.22■■□□□ 1.63
TRIM28-204ENST00000594806 FOXP3Q9BZS1 431 aa25.22■■□□□ 1.63
TRIM28-204ENST00000594806 WWP1Q9H0M0 922 aa25.22■■□□□ 1.63
TRIM28-204ENST00000594806 EPB41L5Q9HCM4 733 aa25.22■■□□□ 1.63
TRIM28-204ENST00000594806 SLC40A1Q9NP59 571 aa25.22■■□□□ 1.63
TRIM28-204ENST00000594806 GRHL1Q9NZI5 618 aa25.22■■□□□ 1.63
TRIM28-204ENST00000594806 IGHV1OR21-1A0A087WYE8 117 aa25.21■■□□□ 1.63
TRIM28-204ENST00000594806 D6RAR5 112 aa25.21■■□□□ 1.63
TRIM28-204ENST00000594806 IFRD1O00458 451 aaPredicted RBP25.21■■□□□ 1.63
TRIM28-204ENST00000594806 ESR1P03372 595 aa25.21■■□□□ 1.63
TRIM28-204ENST00000594806 NDUFS1P28331 727 aa25.21■■□□□ 1.63
TRIM28-204ENST00000594806 PDIA2Q13087 525 aaKnown RBP25.21■■□□□ 1.63
TRIM28-204ENST00000594806 TARDBPQ13148 414 aaKnown RBP eCLIP25.21■■□□□ 1.63
TRIM28-204ENST00000594806 ISXQ2M1V0 245 aa25.21■■□□□ 1.63
TRIM28-204ENST00000594806 ZNF470Q6ECI4 717 aa25.21■■□□□ 1.63
TRIM28-204ENST00000594806 PTRHD1Q6GMV3 140 aaKnown RBP25.21■■□□□ 1.63
TRIM28-204ENST00000594806 XKR5Q6UX68 686 aa25.21■■□□□ 1.63
TRIM28-204ENST00000594806 KCNMB4Q86W47 210 aa25.21■■□□□ 1.63
TRIM28-204ENST00000594806 SEC14L1Q92503 715 aa25.21■■□□□ 1.63
TRIM28-204ENST00000594806 LPGAT1Q92604 370 aa25.21■■□□□ 1.63
TRIM28-204ENST00000594806 TMEM74Q96NL1 305 aa25.21■■□□□ 1.63
TRIM28-204ENST00000594806 LRRC1Q9BTT6 524 aa25.21■■□□□ 1.63
TRIM28-204ENST00000594806 SYNDIG1Q9H7V2 258 aa25.21■■□□□ 1.63
TRIM28-204ENST00000594806 FAM8A1Q9UBU6 413 aa25.21■■□□□ 1.63
TRIM28-204ENST00000594806 PSMD13Q9UNM6 376 aa25.21■■□□□ 1.63
TRIM28-204ENST00000594806 COLEC10Q9Y6Z7 277 aa25.21■■□□□ 1.63
TRIM28-204ENST00000594806 COL27A1Q8IZC6 1860 aaPredicted RBP25.2■■□□□ 1.62
TRIM28-204ENST00000594806 UBA6A0AVT1 1052 aaPredicted RBP25.2■■□□□ 1.62
TRIM28-204ENST00000594806 OR52A4PA6NMU1 304 aa25.2■■□□□ 1.62
TRIM28-204ENST00000594806 CSO75390 466 aaKnown RBP25.2■■□□□ 1.62
TRIM28-204ENST00000594806 BANF1O75531 89 aa25.2■■□□□ 1.62
TRIM28-204ENST00000594806 MTHFD1P11586 935 aaKnown RBP25.2■■□□□ 1.62
TRIM28-204ENST00000594806 SPINK2P20155 84 aa25.2■■□□□ 1.62
TRIM28-204ENST00000594806 STEAP4Q687X5 459 aa25.2■■□□□ 1.62
TRIM28-204ENST00000594806 PIM3Q86V86 326 aa25.2■■□□□ 1.62
TRIM28-204ENST00000594806 IGDCC3Q8IVU1 814 aa25.2■■□□□ 1.62
TRIM28-204ENST00000594806 ASZ1Q8WWH4 475 aa25.2■■□□□ 1.62
TRIM28-204ENST00000594806 TMEM159Q96B96 161 aa25.2■■□□□ 1.62
TRIM28-204ENST00000594806 AHCYL2Q96HN2 611 aaKnown RBP25.2■■□□□ 1.62
TRIM28-204ENST00000594806 C12orf66Q96MD2 445 aa25.2■■□□□ 1.62
TRIM28-204ENST00000594806 PWWP2AQ96N64 755 aa25.2■■□□□ 1.62
TRIM28-204ENST00000594806 INSM2Q96T92 566 aaPredicted RBP25.2■■□□□ 1.62
TRIM28-204ENST00000594806 FAM129AQ9BZQ8 928 aa25.2■■□□□ 1.62
TRIM28-204ENST00000594806 OR52A5Q9H2C5 316 aa25.2■■□□□ 1.62
TRIM28-204ENST00000594806 CHMP2BQ9UQN3 213 aa25.2■■□□□ 1.62
TRIM28-204ENST00000594806 SLC5A10A0PJK1 596 aa25.19■■□□□ 1.62
TRIM28-204ENST00000594806 DUX1O43812 170 aa25.19■■□□□ 1.62
TRIM28-204ENST00000594806 S1PR4O95977 384 aa25.19■■□□□ 1.62
TRIM28-204ENST00000594806 CD1CP29017 333 aa25.19■■□□□ 1.62
TRIM28-204ENST00000594806 LILRA3Q8N6C8 439 aaPredicted RBP25.19■■□□□ 1.62
TRIM28-204ENST00000594806 FBXO5Q9UKT4 447 aa25.19■■□□□ 1.62
TRIM28-204ENST00000594806 FAM149AA5PLN7 773 aa25.18■■□□□ 1.62
TRIM28-204ENST00000594806 APOA4P06727 396 aa25.18■■□□□ 1.62
TRIM28-204ENST00000594806 CCKBRP32239 447 aa25.18■■□□□ 1.62
TRIM28-204ENST00000594806 PLTPP55058 493 aa25.18■■□□□ 1.62
TRIM28-204ENST00000594806 EIF3BP55884 814 aaKnown RBP25.18■■□□□ 1.62
TRIM28-204ENST00000594806 TMED2Q15363 201 aa25.18■■□□□ 1.62
TRIM28-204ENST00000594806 AMZ1Q400G9 498 aa25.18■■□□□ 1.62
TRIM28-204ENST00000594806 SYTL3Q4VX76 610 aa25.18■■□□□ 1.62
TRIM28-204ENST00000594806 HSP90AA5PQ58FG0 334 aa25.18■■□□□ 1.62
TRIM28-204ENST00000594806 UNC5AQ6ZN44 842 aa25.18■■□□□ 1.62
TRIM28-204ENST00000594806 KIAA0408Q6ZU52 694 aa25.18■■□□□ 1.62
TRIM28-204ENST00000594806 CNTN4Q8IWV2 1026 aa25.18■■□□□ 1.62
TRIM28-204ENST00000594806 CERS2Q96G23 380 aa25.18■■□□□ 1.62
TRIM28-204ENST00000594806 RMDN2Q96LZ7 410 aa25.18■■□□□ 1.62
TRIM28-204ENST00000594806 BIRC8Q96P09 236 aa25.18■■□□□ 1.62
TRIM28-204ENST00000594806 NRSN2Q9GZP1 204 aa25.18■■□□□ 1.62
TRIM28-204ENST00000594806 IMP3Q9NV31 184 aaKnown RBP25.18■■□□□ 1.62
TRIM28-204ENST00000594806 IL1RAPL1Q9NZN1 696 aa25.18■■□□□ 1.62
TRIM28-204ENST00000594806 COMMD10Q9Y6G5 202 aa25.18■■□□□ 1.62
TRIM28-204ENST00000594806 CLDN6P56747 220 aa25.17■■□□□ 1.62
TRIM28-204ENST00000594806 SLC7A5Q01650 507 aa25.17■■□□□ 1.62
TRIM28-204ENST00000594806 CAMK2BQ13554 666 aa25.17■■□□□ 1.62
TRIM28-204ENST00000594806 BOP1Q14137 746 aaKnown RBP25.17■■□□□ 1.62
TRIM28-204ENST00000594806 MAP9Q49MG5 647 aa25.17■■□□□ 1.62
TRIM28-204ENST00000594806 WDR74Q6RFH5 385 aaPredicted RBP25.17■■□□□ 1.62
TRIM28-204ENST00000594806 GALNT7Q86SF2 657 aa25.17■■□□□ 1.62
TRIM28-204ENST00000594806 PDZD3Q86UT5 571 aa25.17■■□□□ 1.62
TRIM28-204ENST00000594806 FBXO36Q8NEA4 188 aa25.17■■□□□ 1.62
TRIM28-204ENST00000594806 PYROXD1Q8WU10 500 aa25.17■■□□□ 1.62
TRIM28-204ENST00000594806 STRADBQ9C0K7 418 aa25.17■■□□□ 1.62
TRIM28-204ENST00000594806 MVB12BQ9H7P6 319 aa25.17■■□□□ 1.62
TRIM28-204ENST00000594806 FAM114A2Q9NRY5 505 aa25.17■■□□□ 1.62
TRIM28-204ENST00000594806 CRYL1Q9Y2S2 319 aa25.17■■□□□ 1.62
TRIM28-204ENST00000594806 ENTPD2Q9Y5L3 495 aa25.17■■□□□ 1.62
TRIM28-204ENST00000594806 PKMP14618 531 aaKnown RBP25.16■■□□□ 1.62
TRIM28-204ENST00000594806 AOAHP28039 575 aa25.16■■□□□ 1.62
TRIM28-204ENST00000594806 PDHA2P29803 388 aa25.16■■□□□ 1.62
TRIM28-204ENST00000594806 FMO4P31512 558 aa25.16■■□□□ 1.62
TRIM28-204ENST00000594806 CCR7P32248 378 aa25.16■■□□□ 1.62
TRIM28-204ENST00000594806 SLC1A2P43004 574 aa25.16■■□□□ 1.62
TRIM28-204ENST00000594806 INHBCP55103 352 aa25.16■■□□□ 1.62
TRIM28-204ENST00000594806 ZFP36L1Q07352 338 aaKnown RBP25.16■■□□□ 1.62
TRIM28-204ENST00000594806 EIF3IQ13347 325 aaKnown RBP25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms