RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 NUDT4Q9NZJ9 180 aa20.41■□□□□ 0.86
PNKP-203ENST00000593946 OARD1Q9Y530 152 aa20.41■□□□□ 0.86
PNKP-203ENST00000593946 STX16-NPEPL1H3BU86 382 aa20.4■□□□□ 0.86
PNKP-203ENST00000593946 STX16O14662 325 aa20.4■□□□□ 0.86
PNKP-203ENST00000593946 SEMA4FO95754 770 aa20.4■□□□□ 0.86
PNKP-203ENST00000593946 CHRNGP07510 517 aa20.4■□□□□ 0.86
PNKP-203ENST00000593946 MYCLP1P12525 358 aaPredicted RBP20.4■□□□□ 0.86
PNKP-203ENST00000593946 CCR10P46092 362 aa20.4■□□□□ 0.86
PNKP-203ENST00000593946 ALDH18A1P54886 795 aaKnown RBP20.4■□□□□ 0.86
PNKP-203ENST00000593946 ARL13AQ5H913 290 aaPredicted RBP20.4■□□□□ 0.86
PNKP-203ENST00000593946 CFAP157Q5JU67 520 aa20.4■□□□□ 0.86
PNKP-203ENST00000593946 FRMD7Q6ZUT3 714 aa20.4■□□□□ 0.86
PNKP-203ENST00000593946 FRA10AC1Q70Z53 315 aa20.4■□□□□ 0.86
PNKP-203ENST00000593946 C11orf96Q7Z7L8 435 aa20.4■□□□□ 0.86
PNKP-203ENST00000593946 PJA1Q8NG27 643 aa20.4■□□□□ 0.86
PNKP-203ENST00000593946 PIWIL2Q8TC59 973 aaKnown RBP20.4■□□□□ 0.86
PNKP-203ENST00000593946 C10orf82Q8WW14 230 aa20.4■□□□□ 0.86
PNKP-203ENST00000593946 GLMNQ92990 594 aa20.4■□□□□ 0.86
PNKP-203ENST00000593946 CLDN23Q96B33 292 aa20.4■□□□□ 0.86
PNKP-203ENST00000593946 CHRDQ9H2X0 955 aa20.4■□□□□ 0.86
PNKP-203ENST00000593946 FZD3Q9NPG1 666 aa20.4■□□□□ 0.86
PNKP-203ENST00000593946 HAO1Q9UJM8 370 aa20.4■□□□□ 0.86
PNKP-203ENST00000593946 DNAJC16Q9Y2G8 782 aa20.4■□□□□ 0.86
PNKP-203ENST00000593946 GPR89AB7ZAQ6 455 aa20.39■□□□□ 0.86
PNKP-203ENST00000593946 LATO43561 262 aa20.39■□□□□ 0.86
PNKP-203ENST00000593946 GPR89BP0CG08 455 aa20.39■□□□□ 0.86
PNKP-203ENST00000593946 PHKG1Q16816 387 aa20.39■□□□□ 0.86
PNKP-203ENST00000593946 SYTL3Q4VX76 610 aa20.39■□□□□ 0.86
PNKP-203ENST00000593946 FOXR1Q6PIV2 292 aa20.39■□□□□ 0.86
PNKP-203ENST00000593946 DOK6Q6PKX4 331 aa20.39■□□□□ 0.86
PNKP-203ENST00000593946 RAB44Q7Z6P3 723 aaPredicted RBP20.39■□□□□ 0.86
PNKP-203ENST00000593946 LILRA3Q8N6C8 439 aaPredicted RBP20.39■□□□□ 0.86
PNKP-203ENST00000593946 ANKS4BQ8N8V4 417 aa20.39■□□□□ 0.86
PNKP-203ENST00000593946 RFWD2Q8NHY2 731 aa20.39■□□□□ 0.86
PNKP-203ENST00000593946 ASB11Q8WXH4 323 aa20.39■□□□□ 0.86
PNKP-203ENST00000593946 FOXJ1Q92949 421 aa20.39■□□□□ 0.86
PNKP-203ENST00000593946 TMEM159Q96B96 161 aa20.39■□□□□ 0.86
PNKP-203ENST00000593946 GSTO2Q9H4Y5 243 aa20.39■□□□□ 0.86
PNKP-203ENST00000593946 RDH14Q9HBH5 336 aa20.39■□□□□ 0.86
PNKP-203ENST00000593946 UTP6Q9NYH9 597 aaKnown RBP20.39■□□□□ 0.86
PNKP-203ENST00000593946 CD274Q9NZQ7 290 aa20.39■□□□□ 0.86
PNKP-203ENST00000593946 MARCOQ9UEW3 520 aaPredicted RBP20.39■□□□□ 0.86
PNKP-203ENST00000593946 MUTYHQ9UIF7 546 aa20.39■□□□□ 0.86
PNKP-203ENST00000593946 ARL2BPQ9Y2Y0 163 aa20.39■□□□□ 0.86
PNKP-203ENST00000593946 PCYT1BQ9Y5K3 369 aaPredicted RBP20.39■□□□□ 0.86
PNKP-203ENST00000593946 C17orf113A0A1B0GUU1 675 aa20.39■□□□□ 0.85
PNKP-203ENST00000593946 NCF1BA6NI72 391 aaPredicted RBP20.39■□□□□ 0.85
PNKP-203ENST00000593946 NCF1CA8MVU1 366 aaPredicted RBP20.39■□□□□ 0.85
PNKP-203ENST00000593946 SNUPNO95149 360 aaKnown RBP20.39■□□□□ 0.85
PNKP-203ENST00000593946 SIX3O95343 332 aaPredicted RBP20.39■□□□□ 0.85
PNKP-203ENST00000593946 NCF1P14598 390 aaPredicted RBP20.39■□□□□ 0.85
PNKP-203ENST00000593946 PBLDP30039 288 aaPredicted RBP20.39■□□□□ 0.85
PNKP-203ENST00000593946 ZSCAN26Q16670 478 aa20.39■□□□□ 0.85
PNKP-203ENST00000593946 UNC50Q53HI1 259 aa20.39■□□□□ 0.85
PNKP-203ENST00000593946 CRTC3Q6UUV7 619 aa20.39■□□□□ 0.85
PNKP-203ENST00000593946 XKR5Q6UX68 686 aa20.39■□□□□ 0.85
PNKP-203ENST00000593946 RASGRP3Q8IV61 690 aa20.39■□□□□ 0.85
PNKP-203ENST00000593946 ZNF781Q8N8C0 355 aa20.39■□□□□ 0.85
PNKP-203ENST00000593946 PDPRQ8NCN5 879 aa20.39■□□□□ 0.85
PNKP-203ENST00000593946 C1QTNF3Q9BXJ4 246 aa20.39■□□□□ 0.85
PNKP-203ENST00000593946 KCNK13Q9HB14 408 aa20.39■□□□□ 0.85
PNKP-203ENST00000593946 FAM8A1Q9UBU6 413 aa20.39■□□□□ 0.85
PNKP-203ENST00000593946 CYP8B1Q9UNU6 501 aa20.39■□□□□ 0.85
PNKP-203ENST00000593946 RAP2CQ9Y3L5 183 aa20.39■□□□□ 0.85
PNKP-203ENST00000593946 PLXND1Q9Y4D7 1925 aa20.39■□□□□ 0.85
PNKP-203ENST00000593946 GFYI3L273 518 aa20.38■□□□□ 0.85
PNKP-203ENST00000593946 LIN7AO14910 233 aaPredicted RBP20.38■□□□□ 0.85
PNKP-203ENST00000593946 FFAR2O15552 330 aa20.38■□□□□ 0.85
PNKP-203ENST00000593946 SNX2O60749 519 aa20.38■□□□□ 0.85
PNKP-203ENST00000593946 C8GP07360 202 aa20.38■□□□□ 0.85
PNKP-203ENST00000593946 KITP10721 976 aa20.38■□□□□ 0.85
PNKP-203ENST00000593946 GALNT1Q10472 559 aaPredicted RBP20.38■□□□□ 0.85
PNKP-203ENST00000593946 SP140Q13342 867 aa20.38■□□□□ 0.85
PNKP-203ENST00000593946 SETDB1Q15047 1291 aa20.38■□□□□ 0.85
PNKP-203ENST00000593946 RPS27LQ71UM5 84 aaKnown RBP20.38■□□□□ 0.85
PNKP-203ENST00000593946 SLC22A15Q8IZD6 547 aa20.38■□□□□ 0.85
PNKP-203ENST00000593946 SPEM1Q8N4L4 309 aa20.38■□□□□ 0.85
PNKP-203ENST00000593946 OR2L2Q8NH16 312 aa20.38■□□□□ 0.85
PNKP-203ENST00000593946 TRMOQ9BU70 441 aa20.38■□□□□ 0.85
PNKP-203ENST00000593946 APOOQ9BUR5 198 aa20.38■□□□□ 0.85
PNKP-203ENST00000593946 ILKAPQ9H0C8 392 aaPredicted RBP20.38■□□□□ 0.85
PNKP-203ENST00000593946 PNPOQ9NVS9 261 aa20.38■□□□□ 0.85
PNKP-203ENST00000593946 DCTN4Q9UJW0 460 aa20.38■□□□□ 0.85
PNKP-203ENST00000593946 LRRC14BA6NHZ5 514 aa20.37■□□□□ 0.85
PNKP-203ENST00000593946 POP7O75817 140 aaKnown RBP20.37■□□□□ 0.85
PNKP-203ENST00000593946 SUPT7LO94864 414 aa20.37■□□□□ 0.85
PNKP-203ENST00000593946 MATN4O95460 622 aa20.37■□□□□ 0.85
PNKP-203ENST00000593946 RPS17P08708 135 aaKnown RBP20.37■□□□□ 0.85
PNKP-203ENST00000593946 VCLP18206 1134 aa20.37■□□□□ 0.85
PNKP-203ENST00000593946 OXTRP30559 389 aa20.37■□□□□ 0.85
PNKP-203ENST00000593946 RPS9P46781 194 aaKnown RBP20.37■□□□□ 0.85
PNKP-203ENST00000593946 PREPP48147 710 aa20.37■□□□□ 0.85
PNKP-203ENST00000593946 LRRTM4Q86VH4 590 aa20.37■□□□□ 0.85
PNKP-203ENST00000593946 HM13Q8TCT9 377 aa20.37■□□□□ 0.85
PNKP-203ENST00000593946 SKA2Q8WVK7 121 aaPredicted RBP20.37■□□□□ 0.85
PNKP-203ENST00000593946 TOE1Q96GM8 510 aaKnown RBP20.37■□□□□ 0.85
PNKP-203ENST00000593946 MYOCQ99972 504 aa20.37■□□□□ 0.85
PNKP-203ENST00000593946 SLC12A9Q9BXP2 914 aa20.37■□□□□ 0.85
PNKP-203ENST00000593946 COG4Q9H9E3 785 aa20.37■□□□□ 0.85
PNKP-203ENST00000593946 WSB2Q9NYS7 404 aaPredicted RBP20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms