RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 SGF29Q96ES7 293 aa13.25□□□□□ -0.29
VMP1-217ENST00000593168 COX14Q96I36 57 aa13.25□□□□□ -0.29
VMP1-217ENST00000593168 HIC2Q96JB3 615 aa13.25□□□□□ -0.29
VMP1-217ENST00000593168 BTBD1Q9H0C5 482 aa13.25□□□□□ -0.29
VMP1-217ENST00000593168 SARS2Q9NP81 518 aaKnown RBP13.25□□□□□ -0.29
VMP1-217ENST00000593168 CPSF2Q9P2I0 782 aaKnown RBP13.25□□□□□ -0.29
VMP1-217ENST00000593168 EBF1Q9UH73 591 aa13.25□□□□□ -0.29
VMP1-217ENST00000593168 THADAQ6YHU6 1953 aa13.25□□□□□ -0.29
VMP1-217ENST00000593168 AKAP13Q12802 2813 aa13.25□□□□□ -0.29
VMP1-217ENST00000593168 LRRC72A6NJI9 287 aa13.24□□□□□ -0.29
VMP1-217ENST00000593168 C4orf47A7E2U8 309 aa13.24□□□□□ -0.29
VMP1-217ENST00000593168 C10orf142B7Z368 130 aa13.24□□□□□ -0.29
VMP1-217ENST00000593168 TK2O00142 265 aa13.24□□□□□ -0.29
VMP1-217ENST00000593168 INPP4BO15327 924 aa13.24□□□□□ -0.29
VMP1-217ENST00000593168 ZBTB14O43829 449 aa13.24□□□□□ -0.29
VMP1-217ENST00000593168 VEGFDO43915 354 aa13.24□□□□□ -0.29
VMP1-217ENST00000593168 TRIM13O60858 407 aa13.24□□□□□ -0.29
VMP1-217ENST00000593168 MTX2O75431 263 aa13.24□□□□□ -0.29
VMP1-217ENST00000593168 CDK14O94921 469 aa13.24□□□□□ -0.29
VMP1-217ENST00000593168 FTH1P02794 183 aa13.24□□□□□ -0.29
VMP1-217ENST00000593168 ITGB6P18564 788 aa13.24□□□□□ -0.29
VMP1-217ENST00000593168 BGNP21810 368 aa13.24□□□□□ -0.29
VMP1-217ENST00000593168 AOAHP28039 575 aa13.24□□□□□ -0.29
VMP1-217ENST00000593168 TRIM23P36406 574 aa13.24□□□□□ -0.29
VMP1-217ENST00000593168 FOXC1Q12948 553 aa13.24□□□□□ -0.29
VMP1-217ENST00000593168 CHI3L2Q15782 390 aa13.24□□□□□ -0.29
VMP1-217ENST00000593168 OTOAQ7RTW8 1153 aa13.24□□□□□ -0.29
VMP1-217ENST00000593168 TRIM69Q86WT6 500 aa13.24□□□□□ -0.29
VMP1-217ENST00000593168 C10orf107Q8IVU9 208 aa13.24□□□□□ -0.29
VMP1-217ENST00000593168 SPNS2Q8IVW8 549 aa13.24□□□□□ -0.29
VMP1-217ENST00000593168 CPNE9Q8IYJ1 553 aa13.24□□□□□ -0.29
VMP1-217ENST00000593168 PGBD3Q8N328 593 aa13.24□□□□□ -0.29
VMP1-217ENST00000593168 TP53I13Q8NBR0 393 aaPredicted RBP13.24□□□□□ -0.29
VMP1-217ENST00000593168 PLA2G15Q8NCC3 412 aa13.24□□□□□ -0.29
VMP1-217ENST00000593168 TSTD1Q8NFU3 115 aa13.24□□□□□ -0.29
VMP1-217ENST00000593168 OR2T34Q8NGX1 318 aa13.24□□□□□ -0.29
VMP1-217ENST00000593168 OR6Y1Q8NGX8 325 aa13.24□□□□□ -0.29
VMP1-217ENST00000593168 STAG3L4Q8TBR4 150 aa13.24□□□□□ -0.29
VMP1-217ENST00000593168 HMGB4Q8WW32 186 aa13.24□□□□□ -0.29
VMP1-217ENST00000593168 PTERQ96BW5 349 aa13.24□□□□□ -0.29
VMP1-217ENST00000593168 CCDC126Q96EE4 140 aa13.24□□□□□ -0.29
VMP1-217ENST00000593168 LINGO1Q96FE5 620 aa13.24□□□□□ -0.29
VMP1-217ENST00000593168 ZNF514Q96K75 400 aaPredicted RBP13.24□□□□□ -0.29
VMP1-217ENST00000593168 CCT8L2Q96SF2 557 aa13.24□□□□□ -0.29
VMP1-217ENST00000593168 MECRQ9BV79 373 aa13.24□□□□□ -0.29
VMP1-217ENST00000593168 TMEM121BQ9BXQ6 578 aaPredicted RBP13.24□□□□□ -0.29
VMP1-217ENST00000593168 TEX101Q9BY14 249 aa13.24□□□□□ -0.29
VMP1-217ENST00000593168 OXSMQ9NWU1 459 aa13.24□□□□□ -0.29
VMP1-217ENST00000593168 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.24□□□□□ -0.29
VMP1-217ENST00000593168 MBD1Q9UIS9 605 aaPredicted RBP13.24□□□□□ -0.29
VMP1-217ENST00000593168 LNP1A1A4G5 178 aa13.23□□□□□ -0.29
VMP1-217ENST00000593168 DLX3O60479 287 aa13.23□□□□□ -0.29
VMP1-217ENST00000593168 FAM107AO95990 144 aa13.23□□□□□ -0.29
VMP1-217ENST00000593168 PCCBP05166 539 aa13.23□□□□□ -0.29
VMP1-217ENST00000593168 GSTM1P09488 218 aa13.23□□□□□ -0.29
VMP1-217ENST00000593168 FGF3P11487 239 aaPredicted RBP13.23□□□□□ -0.29
VMP1-217ENST00000593168 ENO3P13929 434 aaPredicted RBP13.23□□□□□ -0.29
VMP1-217ENST00000593168 DRD4P21917 467 aa13.23□□□□□ -0.29
VMP1-217ENST00000593168 ATP5F1P24539 256 aaPredicted RBP13.23□□□□□ -0.29
VMP1-217ENST00000593168 GRK2P25098 689 aa13.23□□□□□ -0.29
VMP1-217ENST00000593168 OXTRP30559 389 aa13.23□□□□□ -0.29
VMP1-217ENST00000593168 CCR7P32248 378 aa13.23□□□□□ -0.29
VMP1-217ENST00000593168 ACSL1P33121 698 aa13.23□□□□□ -0.29
VMP1-217ENST00000593168 PRLHRP49683 370 aa13.23□□□□□ -0.29
VMP1-217ENST00000593168 DNAJB13P59910 316 aa13.23□□□□□ -0.29
VMP1-217ENST00000593168 CDK3Q00526 305 aa13.23□□□□□ -0.29
VMP1-217ENST00000593168 GSTM4Q03013 218 aa13.23□□□□□ -0.29
VMP1-217ENST00000593168 ASPHQ12797 758 aa13.23□□□□□ -0.29
VMP1-217ENST00000593168 GTF2H3Q13889 308 aa13.23□□□□□ -0.29
VMP1-217ENST00000593168 GBX1Q14549 363 aa13.23□□□□□ -0.29
VMP1-217ENST00000593168 NUMA1Q14980 2115 aa13.23□□□□□ -0.29
VMP1-217ENST00000593168 IRF4Q15306 451 aa13.23□□□□□ -0.29
VMP1-217ENST00000593168 BCL7AQ4VC05 210 aa13.23□□□□□ -0.29
VMP1-217ENST00000593168 ACSBG2Q5FVE4 666 aa13.23□□□□□ -0.29
VMP1-217ENST00000593168 PLEKHS1Q5SXH7 462 aa13.23□□□□□ -0.29
VMP1-217ENST00000593168 ZNF648Q5T619 568 aaPredicted RBP13.23□□□□□ -0.29
VMP1-217ENST00000593168 DET1Q7L5Y6 550 aa13.23□□□□□ -0.29
VMP1-217ENST00000593168 CPLX4Q7Z7G2 160 aa13.23□□□□□ -0.29
VMP1-217ENST00000593168 ADGRG6Q86SQ4 1221 aa13.23□□□□□ -0.29
VMP1-217ENST00000593168 FAM124AQ86V42 546 aa13.23□□□□□ -0.29
VMP1-217ENST00000593168 ABCA7Q8IZY2 2146 aa13.23□□□□□ -0.29
VMP1-217ENST00000593168 KDF1Q8NAX2 398 aaPredicted RBP13.23□□□□□ -0.29
VMP1-217ENST00000593168 DENND6BQ8NEG7 585 aa13.23□□□□□ -0.29
VMP1-217ENST00000593168 EEF1AKMT1Q8WVE0 214 aa13.23□□□□□ -0.29
VMP1-217ENST00000593168 LENG8Q96PV6 779 aaPredicted RBP13.23□□□□□ -0.29
VMP1-217ENST00000593168 ATOH8Q96SQ7 321 aa13.23□□□□□ -0.29
VMP1-217ENST00000593168 PITPNM3Q9BZ71 974 aa13.23□□□□□ -0.29
VMP1-217ENST00000593168 UNKQ9C0B0 810 aaKnown RBP13.23□□□□□ -0.29
VMP1-217ENST00000593168 NSRP1Q9H0G5 558 aaKnown RBP13.23□□□□□ -0.29
VMP1-217ENST00000593168 ALG9Q9H6U8 611 aa13.23□□□□□ -0.29
VMP1-217ENST00000593168 MBNL1Q9NR56 388 aaKnown RBP13.23□□□□□ -0.29
VMP1-217ENST00000593168 GPR34Q9UPC5 381 aa13.23□□□□□ -0.29
VMP1-217ENST00000593168 INVSQ9Y283 1065 aa13.23□□□□□ -0.29
VMP1-217ENST00000593168 TNRC6BQ9UPQ9 1833 aaKnown RBP13.23□□□□□ -0.29
VMP1-217ENST00000593168 SYCE1LA8MT33 242 aa13.22□□□□□ -0.29
VMP1-217ENST00000593168 GPR89AB7ZAQ6 455 aa13.22□□□□□ -0.29
VMP1-217ENST00000593168 NUAK1O60285 661 aa13.22□□□□□ -0.29
VMP1-217ENST00000593168 EDF1O60869 148 aaKnown RBP13.22□□□□□ -0.29
VMP1-217ENST00000593168 KERAO60938 352 aa13.22□□□□□ -0.29
VMP1-217ENST00000593168 ABCB7O75027 752 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms