RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 PROKR1Q8TCW9 393 aa18.85■□□□□ 0.61
PRKCSH-209ENST00000589838 LKAAEAR1Q8TD35 194 aa18.85■□□□□ 0.61
PRKCSH-209ENST00000589838 ULK4Q96C45 1275 aa18.85■□□□□ 0.61
PRKCSH-209ENST00000589838 ECHDC3Q96DC8 303 aa18.85■□□□□ 0.61
PRKCSH-209ENST00000589838 SLC45A3Q96JT2 553 aa18.85■□□□□ 0.61
PRKCSH-209ENST00000589838 TEX37Q96LM6 180 aa18.85■□□□□ 0.61
PRKCSH-209ENST00000589838 CEP44Q9C0F1 390 aa18.85■□□□□ 0.61
PRKCSH-209ENST00000589838 ALG2Q9H553 416 aa18.85■□□□□ 0.61
PRKCSH-209ENST00000589838 ZNF696Q9H7X3 374 aa18.85■□□□□ 0.61
PRKCSH-209ENST00000589838 ASAH2Q9NR71 780 aa18.85■□□□□ 0.61
PRKCSH-209ENST00000589838 UBAP1Q9NZ09 502 aa18.85■□□□□ 0.61
PRKCSH-209ENST00000589838 SMIM31A0A1B0GVY4 71 aa18.84■□□□□ 0.61
PRKCSH-209ENST00000589838 A0A1W2PRU2 124 aa18.84■□□□□ 0.61
PRKCSH-209ENST00000589838 ASPDHA6ND91 283 aa18.84■□□□□ 0.61
PRKCSH-209ENST00000589838 ARPC2O15144 300 aa18.84■□□□□ 0.61
PRKCSH-209ENST00000589838 TAPBPO15533 448 aa18.84■□□□□ 0.61
PRKCSH-209ENST00000589838 TIPRLO75663 272 aa18.84■□□□□ 0.61
PRKCSH-209ENST00000589838 POP4O95707 220 aaKnown RBP18.84■□□□□ 0.61
PRKCSH-209ENST00000589838 GUCA1CO95843 209 aa18.84■□□□□ 0.61
PRKCSH-209ENST00000589838 C8AP07357 584 aa18.84■□□□□ 0.61
PRKCSH-209ENST00000589838 PABPC4LP0CB38 370 aaKnown RBP18.84■□□□□ 0.61
PRKCSH-209ENST00000589838 GSK3BP49841 420 aa18.84■□□□□ 0.61
PRKCSH-209ENST00000589838 CDKL1Q00532 357 aa18.84■□□□□ 0.61
PRKCSH-209ENST00000589838 LIPEQ05469 1076 aa18.84■□□□□ 0.61
PRKCSH-209ENST00000589838 TRAF3Q13114 568 aa18.84■□□□□ 0.61
PRKCSH-209ENST00000589838 C18orf21Q32NC0 220 aaPredicted RBP18.84■□□□□ 0.61
PRKCSH-209ENST00000589838 MTX3Q5HYI7 312 aa18.84■□□□□ 0.61
PRKCSH-209ENST00000589838 PAGE3Q5JUK9 113 aa18.84■□□□□ 0.61
PRKCSH-209ENST00000589838 PPP4R4Q6NUP7 873 aa18.84■□□□□ 0.61
PRKCSH-209ENST00000589838 C22orf39Q6P5X5 142 aa18.84■□□□□ 0.61
PRKCSH-209ENST00000589838 ZBTB49Q6ZSB9 765 aa18.84■□□□□ 0.61
PRKCSH-209ENST00000589838 AMIGO2Q86SJ2 522 aa18.84■□□□□ 0.61
PRKCSH-209ENST00000589838 ZNF557Q8N988 423 aaPredicted RBP18.84■□□□□ 0.61
PRKCSH-209ENST00000589838 LMLNQ96KR4 655 aa18.84■□□□□ 0.61
PRKCSH-209ENST00000589838 RPL10LQ96L21 214 aaKnown RBP18.84■□□□□ 0.61
PRKCSH-209ENST00000589838 ZNF641Q96N77 438 aaPredicted RBP18.84■□□□□ 0.61
PRKCSH-209ENST00000589838 APOL5Q9BWW9 433 aa18.84■□□□□ 0.61
PRKCSH-209ENST00000589838 MRPS26Q9BYN8 205 aaKnown RBP18.84■□□□□ 0.61
PRKCSH-209ENST00000589838 C8orf4Q9NR00 106 aa18.84■□□□□ 0.61
PRKCSH-209ENST00000589838 HELZP42694 1942 aaKnown RBP18.84■□□□□ 0.61
PRKCSH-209ENST00000589838 NPIPB15A6NHN6 443 aaPredicted RBP18.84■□□□□ 0.61
PRKCSH-209ENST00000589838 K7EPI3 171 aa18.84■□□□□ 0.61
PRKCSH-209ENST00000589838 ARNTLO00327 626 aa18.84■□□□□ 0.61
PRKCSH-209ENST00000589838 LSM1O15116 133 aaKnown RBP18.84■□□□□ 0.61
PRKCSH-209ENST00000589838 KATNA1O75449 491 aa18.84■□□□□ 0.61
PRKCSH-209ENST00000589838 CXCL14O95715 111 aa18.84■□□□□ 0.61
PRKCSH-209ENST00000589838 ENO2P09104 434 aaPredicted RBP18.84■□□□□ 0.61
PRKCSH-209ENST00000589838 FASP25445 335 aa18.84■□□□□ 0.61
PRKCSH-209ENST00000589838 CA5AP35218 305 aa18.84■□□□□ 0.61
PRKCSH-209ENST00000589838 AP5B1Q2VPB7 878 aa18.84■□□□□ 0.61
PRKCSH-209ENST00000589838 CARD16Q5EG05 197 aa18.84■□□□□ 0.61
PRKCSH-209ENST00000589838 HMBOX1Q6NT76 420 aa18.84■□□□□ 0.61
PRKCSH-209ENST00000589838 CYP20A1Q6UW02 462 aa18.84■□□□□ 0.61
PRKCSH-209ENST00000589838 PROSER1Q86XN7 944 aa18.84■□□□□ 0.61
PRKCSH-209ENST00000589838 HID1Q8IV36 788 aa18.84■□□□□ 0.61
PRKCSH-209ENST00000589838 DCBLD1Q8N8Z6 715 aa18.84■□□□□ 0.61
PRKCSH-209ENST00000589838 KREMEN2Q8NCW0 462 aa18.84■□□□□ 0.61
PRKCSH-209ENST00000589838 GPR26Q8NDV2 337 aa18.84■□□□□ 0.61
PRKCSH-209ENST00000589838 RHBDF1Q96CC6 855 aa18.84■□□□□ 0.61
PRKCSH-209ENST00000589838 CCDC97Q96F63 343 aaPredicted RBP18.84■□□□□ 0.61
PRKCSH-209ENST00000589838 ZBTB18Q99592 522 aa18.84■□□□□ 0.61
PRKCSH-209ENST00000589838 COPS8Q99627 209 aa18.84■□□□□ 0.61
PRKCSH-209ENST00000589838 EMILIN2Q9BXX0 1053 aa18.84■□□□□ 0.61
PRKCSH-209ENST00000589838 SLC46A2Q9BY10 475 aa18.84■□□□□ 0.61
PRKCSH-209ENST00000589838 SLC2A11Q9BYW1 496 aa18.84■□□□□ 0.61
PRKCSH-209ENST00000589838 EPB41L1Q9H4G0 881 aa18.84■□□□□ 0.61
PRKCSH-209ENST00000589838 ELOVL2Q9NXB9 296 aa18.84■□□□□ 0.61
PRKCSH-209ENST00000589838 GMPR2Q9P2T1 348 aaKnown RBP18.84■□□□□ 0.61
PRKCSH-209ENST00000589838 EGFL7Q9UHF1 273 aa18.84■□□□□ 0.61
PRKCSH-209ENST00000589838 TRPS1Q9UHF7 1281 aa18.84■□□□□ 0.61
PRKCSH-209ENST00000589838 AURKCQ9UQB9 309 aa18.84■□□□□ 0.61
PRKCSH-209ENST00000589838 EIF3LQ9Y262 564 aaKnown RBP18.84■□□□□ 0.61
PRKCSH-209ENST00000589838 FGF19O95750 216 aa18.83■□□□□ 0.6
PRKCSH-209ENST00000589838 TIMP1P01033 207 aa18.83■□□□□ 0.6
PRKCSH-209ENST00000589838 EBLN1P0CF75 366 aa18.83■□□□□ 0.6
PRKCSH-209ENST00000589838 CHRM1P11229 460 aaPredicted RBP18.83■□□□□ 0.6
PRKCSH-209ENST00000589838 HTR1EP28566 365 aa18.83■□□□□ 0.6
PRKCSH-209ENST00000589838 PEX19P40855 299 aa18.83■□□□□ 0.6
PRKCSH-209ENST00000589838 HTR6P50406 440 aa18.83■□□□□ 0.6
PRKCSH-209ENST00000589838 TXNL4AP83876 142 aaKnown RBP18.83■□□□□ 0.6
PRKCSH-209ENST00000589838 NRF1Q16656 503 aa18.83■□□□□ 0.6
PRKCSH-209ENST00000589838 TIGD2Q4W5G0 525 aa18.83■□□□□ 0.6
PRKCSH-209ENST00000589838 TSPAN33Q86UF1 283 aa18.83■□□□□ 0.6
PRKCSH-209ENST00000589838 ZSWIM9Q86XI8 627 aa18.83■□□□□ 0.6
PRKCSH-209ENST00000589838 CMTM8Q8IZV2 173 aa18.83■□□□□ 0.6
PRKCSH-209ENST00000589838 MCCC1Q96RQ3 725 aaPredicted RBP18.83■□□□□ 0.6
PRKCSH-209ENST00000589838 CORO1BQ9BR76 489 aa18.83■□□□□ 0.6
PRKCSH-209ENST00000589838 NTMT1Q9BV86 223 aa18.83■□□□□ 0.6
PRKCSH-209ENST00000589838 PADI4Q9UM07 663 aa18.83■□□□□ 0.6
PRKCSH-209ENST00000589838 LZTS1Q9Y250 596 aa18.83■□□□□ 0.6
PRKCSH-209ENST00000589838 CLPTM1O96005 669 aa18.82■□□□□ 0.6
PRKCSH-209ENST00000589838 ANXA5P08758 320 aa18.82■□□□□ 0.6
PRKCSH-209ENST00000589838 OR56A5P0C7T3 313 aa18.82■□□□□ 0.6
PRKCSH-209ENST00000589838 EPB42P16452 691 aa18.82■□□□□ 0.6
PRKCSH-209ENST00000589838 IL12AP29459 219 aa18.82■□□□□ 0.6
PRKCSH-209ENST00000589838 CASP2P42575 452 aa18.82■□□□□ 0.6
PRKCSH-209ENST00000589838 RPL5P46777 297 aaKnown RBP18.82■□□□□ 0.6
PRKCSH-209ENST00000589838 POLR2LP62875 67 aaKnown RBP18.82■□□□□ 0.6
PRKCSH-209ENST00000589838 PRKCQQ04759 706 aa18.82■□□□□ 0.6
PRKCSH-209ENST00000589838 ABRAXAS2Q15018 415 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 134 ms