RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 B4GALNT4Q76KP1 1039 aa8.19□□□□□ -1.1
DNMT1-219ENST00000589349 HSD11B1LQ7Z5J1 315 aa8.19□□□□□ -1.1
DNMT1-219ENST00000589349 TSPAN33Q86UF1 283 aa8.19□□□□□ -1.1
DNMT1-219ENST00000589349 HEATR4Q86WZ0 1026 aa8.19□□□□□ -1.1
DNMT1-219ENST00000589349 LRRC49Q8IUZ0 686 aa8.19□□□□□ -1.1
DNMT1-219ENST00000589349 RHOT2Q8IXI1 618 aa8.19□□□□□ -1.1
DNMT1-219ENST00000589349 CCDC13Q8IYE1 715 aa8.19□□□□□ -1.1
DNMT1-219ENST00000589349 CARFQ8N187 725 aa8.19□□□□□ -1.1
DNMT1-219ENST00000589349 CCHCR1Q8TD31 782 aa8.19□□□□□ -1.1
DNMT1-219ENST00000589349 NAT6Q93015 286 aa8.19□□□□□ -1.1
DNMT1-219ENST00000589349 FUBP1Q96AE4 644 aaKnown RBP8.19□□□□□ -1.1
DNMT1-219ENST00000589349 AP2M1Q96CW1 435 aa8.19□□□□□ -1.1
DNMT1-219ENST00000589349 PDXPQ96GD0 296 aa8.19□□□□□ -1.1
DNMT1-219ENST00000589349 AGAP3Q96P47 875 aa8.19□□□□□ -1.1
DNMT1-219ENST00000589349 KCNC2Q96PR1 638 aa8.19□□□□□ -1.1
DNMT1-219ENST00000589349 LGMNQ99538 433 aa8.19□□□□□ -1.1
DNMT1-219ENST00000589349 MGME1Q9BQP7 344 aa8.19□□□□□ -1.1
DNMT1-219ENST00000589349 ZNF670Q9BS34 389 aa8.19□□□□□ -1.1
DNMT1-219ENST00000589349 PCDHB1Q9Y5F3 818 aa8.19□□□□□ -1.1
DNMT1-219ENST00000589349 C1orf232A0A0U1RR37 186 aa8.18□□□□□ -1.1
DNMT1-219ENST00000589349 MACROD2A1Z1Q3 448 aa8.18□□□□□ -1.1
DNMT1-219ENST00000589349 CFAP69A5D8W1 941 aa8.18□□□□□ -1.1
DNMT1-219ENST00000589349 TMEM202A6NGA9 273 aa8.18□□□□□ -1.1
DNMT1-219ENST00000589349 NPIPB15A6NHN6 443 aaPredicted RBP8.18□□□□□ -1.1
DNMT1-219ENST00000589349 RHPN2P1A8MT19 583 aa8.18□□□□□ -1.1
DNMT1-219ENST00000589349 F5H423 210 aaPredicted RBP8.18□□□□□ -1.1
DNMT1-219ENST00000589349 TRAFD1O14545 582 aaPredicted RBP8.18□□□□□ -1.1
DNMT1-219ENST00000589349 PPP1R12AO14974 1030 aaPredicted RBP8.18□□□□□ -1.1
DNMT1-219ENST00000589349 INPP4BO15327 924 aa8.18□□□□□ -1.1
DNMT1-219ENST00000589349 CYP7B1O75881 506 aa8.18□□□□□ -1.1
DNMT1-219ENST00000589349 HEXIM1O94992 359 aaKnown RBP8.18□□□□□ -1.1
DNMT1-219ENST00000589349 RPLP0P05388 317 aaKnown RBP8.18□□□□□ -1.1
DNMT1-219ENST00000589349 GP1BAP07359 652 aa8.18□□□□□ -1.1
DNMT1-219ENST00000589349 PDHA1P08559 390 aa8.18□□□□□ -1.1
DNMT1-219ENST00000589349 FAHP16930 419 aa8.18□□□□□ -1.1
DNMT1-219ENST00000589349 ZFXP17010 805 aaPredicted RBP8.18□□□□□ -1.1
DNMT1-219ENST00000589349 COMTP21964 271 aa8.18□□□□□ -1.1
DNMT1-219ENST00000589349 TGM2P21980 687 aa8.18□□□□□ -1.1
DNMT1-219ENST00000589349 IL4RP24394 825 aa8.18□□□□□ -1.1
DNMT1-219ENST00000589349 CCNCP24863 283 aa8.18□□□□□ -1.1
DNMT1-219ENST00000589349 HNRNPH3P31942 346 aaKnown RBP8.18□□□□□ -1.1
DNMT1-219ENST00000589349 CYLC1P35663 651 aaPredicted RBP8.18□□□□□ -1.1
DNMT1-219ENST00000589349 CD86P42081 329 aa8.18□□□□□ -1.1
DNMT1-219ENST00000589349 ARHGAP25P42331 645 aa8.18□□□□□ -1.1
DNMT1-219ENST00000589349 ABCG1P45844 678 aa8.18□□□□□ -1.1
DNMT1-219ENST00000589349 KCNC1P48547 511 aa8.18□□□□□ -1.1
DNMT1-219ENST00000589349 ILF3Q12906 894 aaKnown RBP eCLIP8.18□□□□□ -1.19e-7■■■□□ 18.7
DNMT1-219ENST00000589349 RALGDSQ12967 914 aa8.18□□□□□ -1.1
DNMT1-219ENST00000589349 PAFAH1B3Q15102 231 aaKnown RBP8.18□□□□□ -1.1
DNMT1-219ENST00000589349 PDK1Q15118 436 aa8.18□□□□□ -1.1
DNMT1-219ENST00000589349 AMZ1Q400G9 498 aa8.18□□□□□ -1.1
DNMT1-219ENST00000589349 FAM182AQ5T1J6 154 aa8.18□□□□□ -1.1
DNMT1-219ENST00000589349 LRRC66Q68CR7 880 aa8.18□□□□□ -1.1
DNMT1-219ENST00000589349 VASNQ6EMK4 673 aa8.18□□□□□ -1.1
DNMT1-219ENST00000589349 SLC30A9Q6PML9 568 aa8.18□□□□□ -1.1
DNMT1-219ENST00000589349 NPNTQ6UXI9 565 aa8.18□□□□□ -1.1
DNMT1-219ENST00000589349 Q6ZVL8 140 aa8.18□□□□□ -1.1
DNMT1-219ENST00000589349 RHOT1Q8IXI2 618 aa8.18□□□□□ -1.1
DNMT1-219ENST00000589349 RBM12BQ8IXT5 1001 aaKnown RBP8.18□□□□□ -1.1
DNMT1-219ENST00000589349 SLC35F3Q8IY50 421 aa8.18□□□□□ -1.1
DNMT1-219ENST00000589349 ARL10Q8N8L6 244 aa8.18□□□□□ -1.1
DNMT1-219ENST00000589349 RFFLQ8WZ73 363 aa8.18□□□□□ -1.1
DNMT1-219ENST00000589349 OR1E3Q8WZA6 343 aa8.18□□□□□ -1.1
DNMT1-219ENST00000589349 ECHDC3Q96DC8 303 aa8.18□□□□□ -1.1
DNMT1-219ENST00000589349 ATXN7L3BQ96GX2 97 aa8.18□□□□□ -1.1
DNMT1-219ENST00000589349 RNF157Q96PX1 679 aa8.18□□□□□ -1.1
DNMT1-219ENST00000589349 CCDC3Q9BQI4 270 aa8.18□□□□□ -1.1
DNMT1-219ENST00000589349 ADGRE3Q9BY15 652 aa8.18□□□□□ -1.1
DNMT1-219ENST00000589349 CD244Q9BZW8 370 aa8.18□□□□□ -1.1
DNMT1-219ENST00000589349 CLPBQ9H078 707 aa8.18□□□□□ -1.1
DNMT1-219ENST00000589349 TMEM168Q9H0V1 697 aa8.18□□□□□ -1.1
DNMT1-219ENST00000589349 PCDH9Q9HC56 1237 aa8.18□□□□□ -1.1
DNMT1-219ENST00000589349 EPB41L5Q9HCM4 733 aa8.18□□□□□ -1.1
DNMT1-219ENST00000589349 TRIM39Q9HCM9 518 aa8.18□□□□□ -1.1
DNMT1-219ENST00000589349 DDX56Q9NY93 547 aaKnown RBP8.18□□□□□ -1.1
DNMT1-219ENST00000589349 ZNHIT2Q9UHR6 403 aa8.18□□□□□ -1.1
DNMT1-219ENST00000589349 CBLCQ9ULV8 474 aa8.18□□□□□ -1.1
DNMT1-219ENST00000589349 TMEM98Q9Y2Y6 226 aa8.18□□□□□ -1.1
DNMT1-219ENST00000589349 TP53BP1Q12888 1972 aaPredicted RBP8.18□□□□□ -1.1
DNMT1-219ENST00000589349 KMT2BQ9UMN6 2715 aaPredicted RBP8.17□□□□□ -1.1
DNMT1-219ENST00000589349 TCRBV16S1A1N1A0A5B0 115 aa8.17□□□□□ -1.1
DNMT1-219ENST00000589349 PRSS38A1L453 326 aa8.17□□□□□ -1.1
DNMT1-219ENST00000589349 EME2A4GXA9 379 aaPredicted RBP8.17□□□□□ -1.1
DNMT1-219ENST00000589349 HTRA2O43464 458 aaPredicted RBP8.17□□□□□ -1.1
DNMT1-219ENST00000589349 SNX2O60749 519 aa8.17□□□□□ -1.1
DNMT1-219ENST00000589349 CLDN7O95471 211 aa8.17□□□□□ -1.1
DNMT1-219ENST00000589349 PEX11BO96011 259 aa8.17□□□□□ -1.1
DNMT1-219ENST00000589349 HLA-DQB2P05538 268 aa8.17□□□□□ -1.1
DNMT1-219ENST00000589349 MYCLP1P12525 358 aaPredicted RBP8.17□□□□□ -1.1
DNMT1-219ENST00000589349 KRT15P19012 456 aa8.17□□□□□ -1.1
DNMT1-219ENST00000589349 CTNNA2P26232 953 aa8.17□□□□□ -1.1
DNMT1-219ENST00000589349 ALDH4A1P30038 563 aa8.17□□□□□ -1.1
DNMT1-219ENST00000589349 MAN1A1P33908 653 aa8.17□□□□□ -1.1
DNMT1-219ENST00000589349 EIF2S3P41091 472 aaKnown RBP8.17□□□□□ -1.1
DNMT1-219ENST00000589349 SLC1A1P43005 524 aa8.17□□□□□ -1.1
DNMT1-219ENST00000589349 POLD2P49005 469 aa8.17□□□□□ -1.1
DNMT1-219ENST00000589349 SLURP1P55000 103 aa8.17□□□□□ -1.1
DNMT1-219ENST00000589349 KIAA1024LP59773 190 aa8.17□□□□□ -1.1
DNMT1-219ENST00000589349 GALNT3Q14435 633 aa8.17□□□□□ -1.1
DNMT1-219ENST00000589349 PHF19Q5T6S3 580 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms