RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 ZDHHC2Q9UIJ5 367 aa11.85□□□□□ -0.51
CCBE1-203ENST00000589116 SLC12A4Q9UP95 1085 aa11.85□□□□□ -0.51
CCBE1-203ENST00000589116 SORCS3Q9UPU3 1222 aa11.85□□□□□ -0.51
CCBE1-203ENST00000589116 TNPO3Q9Y5L0 923 aaKnown RBP11.85□□□□□ -0.51
CCBE1-203ENST00000589116 TRPC5OSA6NMA1 111 aa11.84□□□□□ -0.51
CCBE1-203ENST00000589116 MAN2B1O00754 1011 aa11.84□□□□□ -0.51
CCBE1-203ENST00000589116 INPP4BO15327 924 aa11.84□□□□□ -0.51
CCBE1-203ENST00000589116 SLC16A5O15375 505 aa11.84□□□□□ -0.51
CCBE1-203ENST00000589116 FFAR2O15552 330 aa11.84□□□□□ -0.51
CCBE1-203ENST00000589116 NARSO43776 548 aaKnown RBP11.84□□□□□ -0.51
CCBE1-203ENST00000589116 GPC4O75487 556 aa11.84□□□□□ -0.51
CCBE1-203ENST00000589116 SIX3O95343 332 aaPredicted RBP11.84□□□□□ -0.51
CCBE1-203ENST00000589116 SERPINA6P08185 405 aa11.84□□□□□ -0.51
CCBE1-203ENST00000589116 VCLP18206 1134 aa11.84□□□□□ -0.51
CCBE1-203ENST00000589116 MAPK9P45984 424 aa11.84□□□□□ -0.51
CCBE1-203ENST00000589116 IDH3AP50213 366 aa11.84□□□□□ -0.51
CCBE1-203ENST00000589116 RPS21P63220 83 aaKnown RBP11.84□□□□□ -0.51
CCBE1-203ENST00000589116 CDKL1Q00532 357 aa11.84□□□□□ -0.51
CCBE1-203ENST00000589116 BNIP1Q12981 228 aa11.84□□□□□ -0.51
CCBE1-203ENST00000589116 LCP2Q13094 533 aa11.84□□□□□ -0.51
CCBE1-203ENST00000589116 BOP1Q14137 746 aaKnown RBP11.84□□□□□ -0.51
CCBE1-203ENST00000589116 PCBP2Q15366 365 aaKnown RBP eCLIP11.84□□□□□ -0.51
CCBE1-203ENST00000589116 MAP7D1Q3KQU3 841 aa11.84□□□□□ -0.51
CCBE1-203ENST00000589116 SLC44A4Q53GD3 710 aa11.84□□□□□ -0.51
CCBE1-203ENST00000589116 SH2D4BQ5SQS7 431 aa11.84□□□□□ -0.51
CCBE1-203ENST00000589116 FBXL6Q8N531 539 aa11.84□□□□□ -0.51
CCBE1-203ENST00000589116 GANCQ8TET4 914 aa11.84□□□□□ -0.51
CCBE1-203ENST00000589116 ZNF483Q8TF39 744 aaPredicted RBP11.84□□□□□ -0.51
CCBE1-203ENST00000589116 ELMO1Q92556 727 aa11.84□□□□□ -0.51
CCBE1-203ENST00000589116 GLMNQ92990 594 aa11.84□□□□□ -0.51
CCBE1-203ENST00000589116 MOCOSQ96EN8 888 aa11.84□□□□□ -0.51
CCBE1-203ENST00000589116 COX14Q96I36 57 aa11.84□□□□□ -0.51
CCBE1-203ENST00000589116 EBF4Q9BQW3 602 aa11.84□□□□□ -0.51
CCBE1-203ENST00000589116 CCM2Q9BSQ5 444 aa11.84□□□□□ -0.51
CCBE1-203ENST00000589116 PREBQ9HCU5 417 aa11.84□□□□□ -0.51
CCBE1-203ENST00000589116 ACSS2Q9NR19 701 aa11.84□□□□□ -0.51
CCBE1-203ENST00000589116 SAR1AQ9NR31 198 aa11.84□□□□□ -0.51
CCBE1-203ENST00000589116 MBD1Q9UIS9 605 aaPredicted RBP11.84□□□□□ -0.51
CCBE1-203ENST00000589116 MMP17Q9ULZ9 603 aa11.84□□□□□ -0.51
CCBE1-203ENST00000589116 ATG2BQ96BY7 2078 aa11.84□□□□□ -0.51
CCBE1-203ENST00000589116 MYO10Q9HD67 2058 aa11.84□□□□□ -0.51
CCBE1-203ENST00000589116 IGLON5A6NGN9 336 aa11.84□□□□□ -0.51
CCBE1-203ENST00000589116 SHISA7A6NL88 538 aa11.84□□□□□ -0.51
CCBE1-203ENST00000589116 OR2AG2A6NM03 316 aa11.84□□□□□ -0.51
CCBE1-203ENST00000589116 K7ESM1 405 aa11.84□□□□□ -0.51
CCBE1-203ENST00000589116 FCHO1O14526 889 aa11.84□□□□□ -0.51
CCBE1-203ENST00000589116 DIAPH2O60879 1101 aa11.84□□□□□ -0.51
CCBE1-203ENST00000589116 ATP5HO75947 161 aa11.84□□□□□ -0.51
CCBE1-203ENST00000589116 CDK14O94921 469 aa11.84□□□□□ -0.51
CCBE1-203ENST00000589116 SLCO2B1O94956 709 aa11.84□□□□□ -0.51
CCBE1-203ENST00000589116 MLYCDO95822 493 aa11.84□□□□□ -0.51
CCBE1-203ENST00000589116 CCR3P51677 355 aa11.84□□□□□ -0.51
CCBE1-203ENST00000589116 CTSCP53634 463 aa11.84□□□□□ -0.51
CCBE1-203ENST00000589116 HSPA14Q0VDF9 509 aa11.84□□□□□ -0.51
CCBE1-203ENST00000589116 TUBB3Q13509 450 aa11.84□□□□□ -0.51
CCBE1-203ENST00000589116 TBCCQ15814 346 aa11.84□□□□□ -0.51
CCBE1-203ENST00000589116 METTL21CQ5VZV1 264 aa11.84□□□□□ -0.51
CCBE1-203ENST00000589116 SULT1C3Q6IMI6 304 aa11.84□□□□□ -0.51
CCBE1-203ENST00000589116 PNCKQ6P2M8 343 aa11.84□□□□□ -0.51
CCBE1-203ENST00000589116 NEK5Q6P3R8 708 aa11.84□□□□□ -0.51
CCBE1-203ENST00000589116 TMEM220Q6QAJ8 160 aa11.84□□□□□ -0.51
CCBE1-203ENST00000589116 ADGRG6Q86SQ4 1221 aa11.84□□□□□ -0.51
CCBE1-203ENST00000589116 PELI3Q8N2H9 469 aa11.84□□□□□ -0.51
CCBE1-203ENST00000589116 RPLP0P6Q8NHW5 317 aa11.84□□□□□ -0.51
CCBE1-203ENST00000589116 AGR3Q8TD06 166 aa11.84□□□□□ -0.51
CCBE1-203ENST00000589116 UBTD2Q8WUN7 234 aa11.84□□□□□ -0.51
CCBE1-203ENST00000589116 SIPA1Q96FS4 1042 aa11.84□□□□□ -0.51
CCBE1-203ENST00000589116 HIC2Q96JB3 615 aa11.84□□□□□ -0.51
CCBE1-203ENST00000589116 LINC00615Q96LM1 132 aaPredicted RBP11.84□□□□□ -0.51
CCBE1-203ENST00000589116 TUBB6Q9BUF5 446 aa11.84□□□□□ -0.51
CCBE1-203ENST00000589116 C1QTNF7Q9BXJ2 289 aa11.84□□□□□ -0.51
CCBE1-203ENST00000589116 TXLNGQ9NUQ3 528 aa11.84□□□□□ -0.51
CCBE1-203ENST00000589116 PCTPQ9UKL6 214 aa11.84□□□□□ -0.51
CCBE1-203ENST00000589116 GPR34Q9UPC5 381 aa11.84□□□□□ -0.51
CCBE1-203ENST00000589116 CDYLQ9Y232 598 aa11.84□□□□□ -0.51
CCBE1-203ENST00000589116 NCKAP1Q9Y2A7 1128 aa11.84□□□□□ -0.51
CCBE1-203ENST00000589116 STK38LQ9Y2H1 464 aa11.84□□□□□ -0.51
CCBE1-203ENST00000589116 RRP15Q9Y3B9 282 aaKnown RBP11.84□□□□□ -0.51
CCBE1-203ENST00000589116 TECTAO75443 2155 aa11.83□□□□□ -0.52
CCBE1-203ENST00000589116 NCF1BA6NI72 391 aaPredicted RBP11.83□□□□□ -0.52
CCBE1-203ENST00000589116 NCF1CA8MVU1 366 aaPredicted RBP11.83□□□□□ -0.52
CCBE1-203ENST00000589116 GPR89AB7ZAQ6 455 aa11.83□□□□□ -0.52
CCBE1-203ENST00000589116 LIN7AO14910 233 aaPredicted RBP11.83□□□□□ -0.52
CCBE1-203ENST00000589116 HGSO14964 777 aaPredicted RBP11.83□□□□□ -0.52
CCBE1-203ENST00000589116 GRID2O43424 1007 aa11.83□□□□□ -0.52
CCBE1-203ENST00000589116 HNRNPCL1O60812 293 aaKnown RBP11.83□□□□□ -0.52
CCBE1-203ENST00000589116 FGF4P08620 206 aa11.83□□□□□ -0.52
CCBE1-203ENST00000589116 GPR89BP0CG08 455 aa11.83□□□□□ -0.52
CCBE1-203ENST00000589116 NCF1P14598 390 aaPredicted RBP11.83□□□□□ -0.52
CCBE1-203ENST00000589116 ADPRHP54922 357 aa11.83□□□□□ -0.52
CCBE1-203ENST00000589116 PLOD1Q02809 727 aaPredicted RBP11.83□□□□□ -0.52
CCBE1-203ENST00000589116 CLCQ05315 142 aa11.83□□□□□ -0.52
CCBE1-203ENST00000589116 MLF2Q15773 248 aaPredicted RBP11.83□□□□□ -0.52
CCBE1-203ENST00000589116 SYTL3Q4VX76 610 aa11.83□□□□□ -0.52
CCBE1-203ENST00000589116 TMEM259Q4ZIN3 620 aa11.83□□□□□ -0.52
CCBE1-203ENST00000589116 ZNF648Q5T619 568 aaPredicted RBP11.83□□□□□ -0.52
CCBE1-203ENST00000589116 TTC23LQ6PF05 361 aa11.83□□□□□ -0.52
CCBE1-203ENST00000589116 ACAD11Q709F0 780 aa11.83□□□□□ -0.52
CCBE1-203ENST00000589116 ASCL5Q7RTU5 278 aa11.83□□□□□ -0.52
CCBE1-203ENST00000589116 TCAIMQ8N3R3 496 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms