RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 KIF1CO43896 1103 aaKnown RBP17.29■□□□□ 0.36
TPM4-206ENST00000587201 FGGP02679 453 aa17.29■□□□□ 0.36
TPM4-206ENST00000587201 MSNP26038 577 aaKnown RBP17.29■□□□□ 0.36
TPM4-206ENST00000587201 SEMA5AQ13591 1074 aa17.29■□□□□ 0.36
TPM4-206ENST00000587201 KRT33BQ14525 404 aa17.29■□□□□ 0.36
TPM4-206ENST00000587201 SIX1Q15475 284 aaPredicted RBP17.29■□□□□ 0.36
TPM4-206ENST00000587201 CCNG2Q16589 344 aa17.29■□□□□ 0.36
TPM4-206ENST00000587201 XKR5Q6UX68 686 aa17.29■□□□□ 0.36
TPM4-206ENST00000587201 PRSS42Q7Z5A4 293 aa17.29■□□□□ 0.36
TPM4-206ENST00000587201 PIANPQ8IYJ0 282 aa17.29■□□□□ 0.36
TPM4-206ENST00000587201 GLIS1Q8NBF1 620 aa17.29■□□□□ 0.36
TPM4-206ENST00000587201 MAIP1Q8WWC4 291 aa17.29■□□□□ 0.36
TPM4-206ENST00000587201 WBP1Q96G27 269 aa17.29■□□□□ 0.36
TPM4-206ENST00000587201 CCM2Q9BSQ5 444 aa17.29■□□□□ 0.36
TPM4-206ENST00000587201 RAB33BQ9H082 229 aa17.29■□□□□ 0.36
TPM4-206ENST00000587201 ZNF768Q9H5H4 540 aaKnown RBP17.29■□□□□ 0.36
TPM4-206ENST00000587201 VPS37BQ9H9H4 285 aa17.29■□□□□ 0.36
TPM4-206ENST00000587201 SIDT1Q9NXL6 827 aaKnown RBP17.29■□□□□ 0.36
TPM4-206ENST00000587201 PPP2R2CQ9Y2T4 447 aa17.29■□□□□ 0.36
TPM4-206ENST00000587201 PCDHGA4Q9Y5G9 962 aa17.29■□□□□ 0.36
TPM4-206ENST00000587201 COLEC10Q9Y6Z7 277 aa17.29■□□□□ 0.36
TPM4-206ENST00000587201 CEP104O60308 925 aa17.28■□□□□ 0.36
TPM4-206ENST00000587201 ZSCAN5DPP0CG00 497 aa17.28■□□□□ 0.36
TPM4-206ENST00000587201 GRIA1P42261 906 aa17.28■□□□□ 0.36
TPM4-206ENST00000587201 PPP1CAP62136 330 aa17.28■□□□□ 0.36
TPM4-206ENST00000587201 LAMB3Q13751 1172 aa17.28■□□□□ 0.36
TPM4-206ENST00000587201 DBN1Q16643 649 aa17.28■□□□□ 0.36
TPM4-206ENST00000587201 GSTA5Q7RTV2 222 aa17.28■□□□□ 0.36
TPM4-206ENST00000587201 RMDN2Q96LZ7 410 aa17.28■□□□□ 0.36
TPM4-206ENST00000587201 TLR10Q9BXR5 811 aa17.28■□□□□ 0.36
TPM4-206ENST00000587201 COG4Q9H9E3 785 aa17.28■□□□□ 0.36
TPM4-206ENST00000587201 SMARCAL1Q9NZC9 954 aa17.28■□□□□ 0.36
TPM4-206ENST00000587201 PILRAQ9UKJ1 303 aa17.28■□□□□ 0.36
TPM4-206ENST00000587201 DRG1Q9Y295 367 aaKnown RBP17.28■□□□□ 0.36
TPM4-206ENST00000587201 HEBP2Q9Y5Z4 205 aa17.28■□□□□ 0.36
TPM4-206ENST00000587201 CCDC162PA2VCL2 907 aa17.27■□□□□ 0.36
TPM4-206ENST00000587201 OR51F1A6NGY5 319 aa17.27■□□□□ 0.36
TPM4-206ENST00000587201 STK17BO94768 372 aa17.27■□□□□ 0.36
TPM4-206ENST00000587201 APRTP07741 180 aa17.27■□□□□ 0.36
TPM4-206ENST00000587201 WT1P19544 449 aaPredicted RBP17.27■□□□□ 0.36
TPM4-206ENST00000587201 ADRA1DP25100 572 aa17.27■□□□□ 0.36
TPM4-206ENST00000587201 PSMA3P25788 255 aa17.27■□□□□ 0.36
TPM4-206ENST00000587201 RPL22P35268 128 aaKnown RBP17.27■□□□□ 0.36
TPM4-206ENST00000587201 NSG1P42857 185 aa17.27■□□□□ 0.36
TPM4-206ENST00000587201 SH3BP2P78314 561 aa17.27■□□□□ 0.36
TPM4-206ENST00000587201 TSTD2Q5T7W7 516 aa17.27■□□□□ 0.36
TPM4-206ENST00000587201 CAPRIN2Q6IMN6 1127 aaKnown RBP17.27■□□□□ 0.36
TPM4-206ENST00000587201 ZNF449Q6P9G9 518 aa17.27■□□□□ 0.36
TPM4-206ENST00000587201 DRICH1Q6PGQ1 229 aaPredicted RBP17.27■□□□□ 0.36
TPM4-206ENST00000587201 OOSP2Q86WS3 158 aa17.27■□□□□ 0.36
TPM4-206ENST00000587201 NLGN4XQ8N0W4 816 aa17.27■□□□□ 0.36
TPM4-206ENST00000587201 CLDN19Q8N6F1 224 aa17.27■□□□□ 0.36
TPM4-206ENST00000587201 NLGN4YQ8NFZ3 816 aaPredicted RBP17.27■□□□□ 0.36
TPM4-206ENST00000587201 ZFPM2Q8WW38 1151 aa17.27■□□□□ 0.36
TPM4-206ENST00000587201 KLHL6Q8WZ60 621 aa17.27■□□□□ 0.36
TPM4-206ENST00000587201 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.27■□□□□ 0.36
TPM4-206ENST00000587201 OR6C1Q96RD1 312 aa17.27■□□□□ 0.36
TPM4-206ENST00000587201 RANBP9Q96S59 729 aa17.27■□□□□ 0.36
TPM4-206ENST00000587201 SPRY4Q9C004 299 aa17.27■□□□□ 0.36
TPM4-206ENST00000587201 KIR3DX1Q9H7L2 352 aa17.27■□□□□ 0.36
TPM4-206ENST00000587201 CASS4Q9NQ75 786 aa17.27■□□□□ 0.36
TPM4-206ENST00000587201 HRASLS2Q9NWW9 162 aa17.27■□□□□ 0.36
TPM4-206ENST00000587201 SLC24A2Q9UI40 661 aa17.27■□□□□ 0.36
TPM4-206ENST00000587201 ZKSCAN5Q9Y2L8 839 aa17.27■□□□□ 0.36
TPM4-206ENST00000587201 MGAQ8IWI9 3026 aa17.26■□□□□ 0.35
TPM4-206ENST00000587201 OR5K3A6NET4 321 aa17.26■□□□□ 0.35
TPM4-206ENST00000587201 IFRD1O00458 451 aaPredicted RBP17.26■□□□□ 0.35
TPM4-206ENST00000587201 AP2A2O94973 939 aa17.26■□□□□ 0.35
TPM4-206ENST00000587201 LIFP15018 202 aa17.26■□□□□ 0.35
TPM4-206ENST00000587201 MAP4P27816 1152 aaKnown RBP17.26■□□□□ 0.35
TPM4-206ENST00000587201 NDUFS1P28331 727 aa17.26■□□□□ 0.35
TPM4-206ENST00000587201 CXCR5P32302 372 aa17.26■□□□□ 0.35
TPM4-206ENST00000587201 FOXN2P32314 431 aa17.26■□□□□ 0.35
TPM4-206ENST00000587201 C19orf57Q0VDD7 668 aa17.26■□□□□ 0.35
TPM4-206ENST00000587201 LY6DQ14210 128 aa17.26■□□□□ 0.35
TPM4-206ENST00000587201 ITIH4Q14624 930 aa17.26■□□□□ 0.35
TPM4-206ENST00000587201 DNTTIP2Q5QJE6 756 aaKnown RBP17.26■□□□□ 0.35
TPM4-206ENST00000587201 ARMC6Q6NXE6 501 aa17.26■□□□□ 0.35
TPM4-206ENST00000587201 OR13J1Q8NGT2 312 aa17.26■□□□□ 0.35
TPM4-206ENST00000587201 UBXN4Q92575 508 aa17.26■□□□□ 0.35
TPM4-206ENST00000587201 HDAC10Q969S8 669 aa17.26■□□□□ 0.35
TPM4-206ENST00000587201 FERD3LQ96RJ6 166 aa17.26■□□□□ 0.35
TPM4-206ENST00000587201 SLC2A6Q9UGQ3 507 aa17.26■□□□□ 0.35
TPM4-206ENST00000587201 TMEM184BQ9Y519 407 aaPredicted RBP17.26■□□□□ 0.35
TPM4-206ENST00000587201 PRSS21Q9Y6M0 314 aa17.26■□□□□ 0.35
TPM4-206ENST00000587201 UBA6A0AVT1 1052 aaPredicted RBP17.25■□□□□ 0.35
TPM4-206ENST00000587201 OR6C74A6NCV1 312 aa17.25■□□□□ 0.35
TPM4-206ENST00000587201 QSOX1O00391 747 aa17.25■□□□□ 0.35
TPM4-206ENST00000587201 GOT2P00505 430 aaKnown RBP17.25■□□□□ 0.35
TPM4-206ENST00000587201 GSTM1P09488 218 aa17.25■□□□□ 0.35
TPM4-206ENST00000587201 NELFEP18615 380 aaKnown RBP17.25■□□□□ 0.35
TPM4-206ENST00000587201 PDHA2P29803 388 aa17.25■□□□□ 0.35
TPM4-206ENST00000587201 KCNJ1P48048 391 aa17.25■□□□□ 0.35
TPM4-206ENST00000587201 BASP1P80723 227 aaKnown RBP17.25■□□□□ 0.35
TPM4-206ENST00000587201 GSTM4Q03013 218 aa17.25■□□□□ 0.35
TPM4-206ENST00000587201 IL11RAQ14626 422 aa17.25■□□□□ 0.35
TPM4-206ENST00000587201 AFTPHQ6ULP2 937 aa17.25■□□□□ 0.35
TPM4-206ENST00000587201 C4orf22Q6V702 233 aa17.25■□□□□ 0.35
TPM4-206ENST00000587201 NLRP9Q7RTR0 991 aa17.25■□□□□ 0.35
TPM4-206ENST00000587201 TIPARPQ7Z3E1 657 aaKnown RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms