RNA–Protein interactions for RNA: ENST00000585026.1

CSNK1D-226, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-226ENST00000585026 LRRC1Q9BTT6 524 aa10.53□□□□□ -0.72
CSNK1D-226ENST00000585026 SLC29A3Q9BZD2 475 aa10.53□□□□□ -0.72
CSNK1D-226ENST00000585026 GPR63Q9BZJ6 419 aa10.53□□□□□ -0.72
CSNK1D-226ENST00000585026 BRD8Q9H0E9 1235 aa10.53□□□□□ -0.72
CSNK1D-226ENST00000585026 SLC40A1Q9NP59 571 aa10.53□□□□□ -0.72
CSNK1D-226ENST00000585026 ZNF624Q9P2J8 865 aaPredicted RBP10.53□□□□□ -0.72
CSNK1D-226ENST00000585026 NFKBIL1Q9UBC1 381 aaPredicted RBP10.53□□□□□ -0.72
CSNK1D-226ENST00000585026 DRG1Q9Y295 367 aaKnown RBP10.53□□□□□ -0.72
CSNK1D-226ENST00000585026 DNAJC16Q9Y2G8 782 aa10.53□□□□□ -0.72
CSNK1D-226ENST00000585026 PCDHGB7Q9Y5F8 929 aa10.53□□□□□ -0.72
CSNK1D-226ENST00000585026 FAM187AA6NFU0 413 aa10.52□□□□□ -0.73
CSNK1D-226ENST00000585026 ENO4A6NNW6 628 aa10.52□□□□□ -0.73
CSNK1D-226ENST00000585026 K7EM74 188 aa10.52□□□□□ -0.73
CSNK1D-226ENST00000585026 HLA-DQB2P05538 268 aa10.52□□□□□ -0.73
CSNK1D-226ENST00000585026 FURINP09958 794 aa10.52□□□□□ -0.73
CSNK1D-226ENST00000585026 GNLYP22749 145 aa10.52□□□□□ -0.73
CSNK1D-226ENST00000585026 PTPN4P29074 926 aa10.52□□□□□ -0.73
CSNK1D-226ENST00000585026 COILP38432 576 aaPredicted RBP10.52□□□□□ -0.73
CSNK1D-226ENST00000585026 CD86P42081 329 aa10.52□□□□□ -0.73
CSNK1D-226ENST00000585026 DRG2P55039 364 aaKnown RBP10.52□□□□□ -0.73
CSNK1D-226ENST00000585026 NIPAL4Q0D2K0 466 aa10.52□□□□□ -0.73
CSNK1D-226ENST00000585026 MMRN1Q13201 1228 aa10.52□□□□□ -0.73
CSNK1D-226ENST00000585026 TUBB3Q13509 450 aa10.52□□□□□ -0.73
CSNK1D-226ENST00000585026 TFDP2Q14188 446 aa10.52□□□□□ -0.73
CSNK1D-226ENST00000585026 GPR18Q14330 331 aa10.52□□□□□ -0.73
CSNK1D-226ENST00000585026 SEPT7Q16181 437 aaKnown RBP10.52□□□□□ -0.73
CSNK1D-226ENST00000585026 UGT8Q16880 541 aa10.52□□□□□ -0.73
CSNK1D-226ENST00000585026 PLA2G4EQ3MJ16 856 aa10.52□□□□□ -0.73
CSNK1D-226ENST00000585026 ZFYVE27Q5T4F4 411 aa10.52□□□□□ -0.73
CSNK1D-226ENST00000585026 FAM92BQ6ZTR7 304 aa10.52□□□□□ -0.73
CSNK1D-226ENST00000585026 CCDC50Q8IVM0 306 aa10.52□□□□□ -0.73
CSNK1D-226ENST00000585026 OR8K5Q8NH50 307 aa10.52□□□□□ -0.73
CSNK1D-226ENST00000585026 ANKRD7Q92527 254 aa10.52□□□□□ -0.73
CSNK1D-226ENST00000585026 RSC1A1Q92681 617 aa10.52□□□□□ -0.73
CSNK1D-226ENST00000585026 MAGOHBQ96A72 148 aaKnown RBP10.52□□□□□ -0.73
CSNK1D-226ENST00000585026 HDAC11Q96DB2 347 aa10.52□□□□□ -0.73
CSNK1D-226ENST00000585026 RNF157Q96PX1 679 aa10.52□□□□□ -0.73
CSNK1D-226ENST00000585026 KRT12Q99456 494 aa10.52□□□□□ -0.73
CSNK1D-226ENST00000585026 CD180Q99467 661 aa10.52□□□□□ -0.73
CSNK1D-226ENST00000585026 PARD6BQ9BYG5 372 aa10.52□□□□□ -0.73
CSNK1D-226ENST00000585026 ZCCHC2Q9C0B9 1178 aaKnown RBP10.52□□□□□ -0.73
CSNK1D-226ENST00000585026 ACTL8Q9H568 366 aa10.52□□□□□ -0.73
CSNK1D-226ENST00000585026 MAGEE1Q9HCI5 957 aa10.52□□□□□ -0.73
CSNK1D-226ENST00000585026 ARFGAP3Q9NP61 516 aa10.52□□□□□ -0.73
CSNK1D-226ENST00000585026 SCHIP1Q9P0W5 487 aaPredicted RBP10.52□□□□□ -0.73
CSNK1D-226ENST00000585026 ZNF451Q9Y4E5 1061 aa10.52□□□□□ -0.73
CSNK1D-226ENST00000585026 COL12A1Q99715 3063 aa10.51□□□□□ -0.73
CSNK1D-226ENST00000585026 KIF1CO43896 1103 aaKnown RBP10.51□□□□□ -0.73
CSNK1D-226ENST00000585026 DPM1O60762 260 aa10.51□□□□□ -0.73
CSNK1D-226ENST00000585026 CPNE3O75131 537 aaKnown RBP10.51□□□□□ -0.73
CSNK1D-226ENST00000585026 JCHAINP01591 159 aa10.51□□□□□ -0.73
CSNK1D-226ENST00000585026 KLK3P07288 261 aaPredicted RBP10.51□□□□□ -0.73
CSNK1D-226ENST00000585026 ZFXP17010 805 aaPredicted RBP10.51□□□□□ -0.73
CSNK1D-226ENST00000585026 RPL10P27635 214 aaKnown RBP10.51□□□□□ -0.73
CSNK1D-226ENST00000585026 TNFRSF8P28908 595 aa10.51□□□□□ -0.73
CSNK1D-226ENST00000585026 GJC1P36383 396 aa10.51□□□□□ -0.73
CSNK1D-226ENST00000585026 PTGIRP43119 386 aa10.51□□□□□ -0.73
CSNK1D-226ENST00000585026 TNNT3P45378 269 aaPredicted RBP10.51□□□□□ -0.73
CSNK1D-226ENST00000585026 CCL11P51671 97 aa10.51□□□□□ -0.73
CSNK1D-226ENST00000585026 ADCY2Q08462 1091 aa10.51□□□□□ -0.73
CSNK1D-226ENST00000585026 IHHQ14623 411 aa10.51□□□□□ -0.73
CSNK1D-226ENST00000585026 CHRNA6Q15825 494 aa10.51□□□□□ -0.73
CSNK1D-226ENST00000585026 TMTC4Q5T4D3 741 aa10.51□□□□□ -0.73
CSNK1D-226ENST00000585026 ZNF648Q5T619 568 aaPredicted RBP10.51□□□□□ -0.73
CSNK1D-226ENST00000585026 ZDHHC20Q5W0Z9 365 aa10.51□□□□□ -0.73
CSNK1D-226ENST00000585026 SLC9A4Q6AI14 798 aa10.51□□□□□ -0.73
CSNK1D-226ENST00000585026 C8orf74Q6P047 294 aa10.51□□□□□ -0.73
CSNK1D-226ENST00000585026 SYDE1Q6ZW31 735 aaPredicted RBP10.51□□□□□ -0.73
CSNK1D-226ENST00000585026 TMC3Q7Z5M5 1100 aa10.51□□□□□ -0.73
CSNK1D-226ENST00000585026 TMEM135Q86UB9 458 aa10.51□□□□□ -0.73
CSNK1D-226ENST00000585026 TRAPPC5Q8IUR0 188 aa10.51□□□□□ -0.73
CSNK1D-226ENST00000585026 PQLC3Q8N755 202 aa10.51□□□□□ -0.73
CSNK1D-226ENST00000585026 GPR26Q8NDV2 337 aa10.51□□□□□ -0.73
CSNK1D-226ENST00000585026 GDAP1Q8TB36 358 aa10.51□□□□□ -0.73
CSNK1D-226ENST00000585026 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.51□□□□□ -0.733e-8■■■■□ 26.7
CSNK1D-226ENST00000585026 SLC41A2Q96JW4 573 aa10.51□□□□□ -0.73
CSNK1D-226ENST00000585026 HEMGNQ9BXL5 484 aa10.51□□□□□ -0.73
CSNK1D-226ENST00000585026 DDX47Q9H0S4 455 aaKnown RBP10.51□□□□□ -0.73
CSNK1D-226ENST00000585026 ING2Q9H160 280 aa10.51□□□□□ -0.73
CSNK1D-226ENST00000585026 FGF21Q9NSA1 209 aa10.51□□□□□ -0.73
CSNK1D-226ENST00000585026 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.51□□□□□ -0.73
CSNK1D-226ENST00000585026 SEMA5BQ9P283 1151 aa10.51□□□□□ -0.73
CSNK1D-226ENST00000585026 SLC23A2Q9UGH3 650 aa10.51□□□□□ -0.73
CSNK1D-226ENST00000585026 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.51□□□□□ -0.731e-7■□□□□ 10.2
CSNK1D-226ENST00000585026 DMGDHQ9UI17 866 aaKnown RBP10.51□□□□□ -0.73
CSNK1D-226ENST00000585026 SHOC2Q9UQ13 582 aa10.51□□□□□ -0.73
CSNK1D-226ENST00000585026 FARSAQ9Y285 508 aaKnown RBP10.51□□□□□ -0.73
CSNK1D-226ENST00000585026 MAP4K5Q9Y4K4 846 aa10.51□□□□□ -0.73
CSNK1D-226ENST00000585026 V9GYY5 206 aaPredicted RBP10.51□□□□□ -0.73
CSNK1D-226ENST00000585026 UBA6A0AVT1 1052 aaPredicted RBP10.5□□□□□ -0.73
CSNK1D-226ENST00000585026 OR52A4PA6NMU1 304 aa10.5□□□□□ -0.73
CSNK1D-226ENST00000585026 APOC4-APOC2K7ER74 178 aa10.5□□□□□ -0.73
CSNK1D-226ENST00000585026 RAD51CO43502 376 aa10.5□□□□□ -0.73
CSNK1D-226ENST00000585026 LIASO43766 372 aa10.5□□□□□ -0.73
CSNK1D-226ENST00000585026 CST8O60676 142 aa10.5□□□□□ -0.73
CSNK1D-226ENST00000585026 DNAJB5O75953 348 aa10.5□□□□□ -0.73
CSNK1D-226ENST00000585026 APOC2P02655 101 aa10.5□□□□□ -0.73
CSNK1D-226ENST00000585026 SLC4A1P02730 911 aa10.5□□□□□ -0.73
CSNK1D-226ENST00000585026 RHOXF2BP0C7M4 288 aa10.5□□□□□ -0.73
CSNK1D-226ENST00000585026 BRAFP15056 766 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms