RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-223ENST00000584760 RIMKLBQ9ULI2 386 aa13.03□□□□□ -0.32
SREBF1-223ENST00000584760 PSMD13Q9UNM6 376 aa13.03□□□□□ -0.32
SREBF1-223ENST00000584760 HEATR9A2RTY3 570 aa13.02□□□□□ -0.33
SREBF1-223ENST00000584760 CCDC162PA2VCL2 907 aa13.02□□□□□ -0.33
SREBF1-223ENST00000584760 OR51F1A6NGY5 319 aa13.02□□□□□ -0.33
SREBF1-223ENST00000584760 SUV39H1O43463 412 aa13.02□□□□□ -0.33
SREBF1-223ENST00000584760 UBXN7O94888 489 aa13.02□□□□□ -0.33
SREBF1-223ENST00000584760 GAS8O95995 478 aa13.02□□□□□ -0.33
SREBF1-223ENST00000584760 C9P02748 559 aa13.02□□□□□ -0.33
SREBF1-223ENST00000584760 MTHFD1P11586 935 aaKnown RBP13.02□□□□□ -0.33
SREBF1-223ENST00000584760 ITGB6P18564 788 aa13.02□□□□□ -0.33
SREBF1-223ENST00000584760 MSNP26038 577 aaKnown RBP13.02□□□□□ -0.33
SREBF1-223ENST00000584760 FOXN2P32314 431 aa13.02□□□□□ -0.33
SREBF1-223ENST00000584760 CSTF2P33240 577 aaKnown RBP eCLIP13.02□□□□□ -0.33
SREBF1-223ENST00000584760 PPM1FP49593 454 aaPredicted RBP13.02□□□□□ -0.33
SREBF1-223ENST00000584760 MAPK10P53779 464 aa13.02□□□□□ -0.33
SREBF1-223ENST00000584760 GFERP55789 205 aa13.02□□□□□ -0.33
SREBF1-223ENST00000584760 ACVR1Q04771 509 aa13.02□□□□□ -0.33
SREBF1-223ENST00000584760 DBN1Q16643 649 aa13.02□□□□□ -0.33
SREBF1-223ENST00000584760 SKIDA1Q1XH10 827 aa13.02□□□□□ -0.33
SREBF1-223ENST00000584760 ZRANB3Q5FWF4 1079 aa13.02□□□□□ -0.33
SREBF1-223ENST00000584760 C4orf22Q6V702 233 aa13.02□□□□□ -0.33
SREBF1-223ENST00000584760 LILRA3Q8N6C8 439 aaPredicted RBP13.02□□□□□ -0.33
SREBF1-223ENST00000584760 HM13Q8TCT9 377 aa13.02□□□□□ -0.33
SREBF1-223ENST00000584760 RSC1A1Q92681 617 aa13.02□□□□□ -0.33
SREBF1-223ENST00000584760 USP7Q93009 1102 aa13.02□□□□□ -0.33
SREBF1-223ENST00000584760 PDLIM2Q96JY6 352 aa13.02□□□□□ -0.33
SREBF1-223ENST00000584760 RMDN2Q96LZ7 410 aa13.02□□□□□ -0.33
SREBF1-223ENST00000584760 ZNF778Q96MU6 729 aa13.02□□□□□ -0.33
SREBF1-223ENST00000584760 WWP1Q9H0M0 922 aa13.02□□□□□ -0.33
SREBF1-223ENST00000584760 HOMER3Q9NSC5 361 aa13.02□□□□□ -0.33
SREBF1-223ENST00000584760 SLC2A6Q9UGQ3 507 aa13.02□□□□□ -0.33
SREBF1-223ENST00000584760 ACSL5Q9ULC5 683 aa13.02□□□□□ -0.33
SREBF1-223ENST00000584760 TCAF1Q9Y4C2 921 aa13.02□□□□□ -0.33
SREBF1-223ENST00000584760 PCDHGA3Q9Y5H0 932 aa13.02□□□□□ -0.33
SREBF1-223ENST00000584760 B4E171 279 aa13.01□□□□□ -0.33
SREBF1-223ENST00000584760 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.01□□□□□ -0.33
SREBF1-223ENST00000584760 ITGB2P05107 769 aa13.01□□□□□ -0.33
SREBF1-223ENST00000584760 ANKRD34CP0C6C1 535 aa13.01□□□□□ -0.33
SREBF1-223ENST00000584760 TYRP1P17643 537 aa13.01□□□□□ -0.33
SREBF1-223ENST00000584760 ADRA1DP25100 572 aa13.01□□□□□ -0.33
SREBF1-223ENST00000584760 TSPAN7P41732 249 aa13.01□□□□□ -0.33
SREBF1-223ENST00000584760 BASP1P80723 227 aaKnown RBP13.01□□□□□ -0.33
SREBF1-223ENST00000584760 LAMB3Q13751 1172 aa13.01□□□□□ -0.33
SREBF1-223ENST00000584760 KCTD19Q17RG1 926 aaPredicted RBP13.01□□□□□ -0.33
SREBF1-223ENST00000584760 SNAP47Q5SQN1 464 aa13.01□□□□□ -0.33
SREBF1-223ENST00000584760 TSTD2Q5T7W7 516 aa13.01□□□□□ -0.33
SREBF1-223ENST00000584760 DUS1LQ6P1R4 473 aaKnown RBP13.01□□□□□ -0.33
SREBF1-223ENST00000584760 TTC27Q6P3X3 843 aa13.01□□□□□ -0.33
SREBF1-223ENST00000584760 PACS1Q6VY07 963 aa13.01□□□□□ -0.33
SREBF1-223ENST00000584760 ZNF534Q76KX8 674 aa13.01□□□□□ -0.33
SREBF1-223ENST00000584760 GSTA5Q7RTV2 222 aa13.01□□□□□ -0.33
SREBF1-223ENST00000584760 PLXDC1Q8IUK5 500 aa13.01□□□□□ -0.33
SREBF1-223ENST00000584760 SLC35F6Q8N357 371 aa13.01□□□□□ -0.33
SREBF1-223ENST00000584760 CLDN19Q8N6F1 224 aa13.01□□□□□ -0.33
SREBF1-223ENST00000584760 SPDYE1Q8NFV5 336 aaPredicted RBP13.01□□□□□ -0.33
SREBF1-223ENST00000584760 PEX13Q92968 403 aa13.01□□□□□ -0.33
SREBF1-223ENST00000584760 MS4A14Q96JA4 679 aa13.01□□□□□ -0.33
SREBF1-223ENST00000584760 PBKQ96KB5 322 aa13.01□□□□□ -0.33
SREBF1-223ENST00000584760 DDA1Q9BW61 102 aa13.01□□□□□ -0.33
SREBF1-223ENST00000584760 COG4Q9H9E3 785 aa13.01□□□□□ -0.33
SREBF1-223ENST00000584760 IMP3Q9NV31 184 aaKnown RBP13.01□□□□□ -0.33
SREBF1-223ENST00000584760 OCIAD1Q9NX40 245 aa13.01□□□□□ -0.33
SREBF1-223ENST00000584760 FAM8A1Q9UBU6 413 aa13.01□□□□□ -0.33
SREBF1-223ENST00000584760 TTC7AQ9ULT0 858 aaPredicted RBP13.01□□□□□ -0.33
SREBF1-223ENST00000584760 CFAP20Q9Y6A4 193 aaKnown RBP13.01□□□□□ -0.33
SREBF1-223ENST00000584760 C17orf113A0A1B0GUU1 675 aa13□□□□□ -0.33
SREBF1-223ENST00000584760 EFCAB7A8K855 629 aa13□□□□□ -0.33
SREBF1-223ENST00000584760 A8MU76 341 aa13□□□□□ -0.33
SREBF1-223ENST00000584760 ZSCAN12O43309 604 aa13□□□□□ -0.33
SREBF1-223ENST00000584760 SLC35G4P0C7Q5 338 aa13□□□□□ -0.33
SREBF1-223ENST00000584760 LIPCP11150 499 aa13□□□□□ -0.33
SREBF1-223ENST00000584760 CD82P27701 267 aa13□□□□□ -0.33
SREBF1-223ENST00000584760 CYP4F2P78329 520 aa13□□□□□ -0.33
SREBF1-223ENST00000584760 ITIH4Q14624 930 aa13□□□□□ -0.33
SREBF1-223ENST00000584760 TBR1Q16650 682 aa13□□□□□ -0.33
SREBF1-223ENST00000584760 CYP1B1Q16678 543 aa13□□□□□ -0.33
SREBF1-223ENST00000584760 CAPRIN2Q6IMN6 1127 aaKnown RBP13□□□□□ -0.33
SREBF1-223ENST00000584760 AFTPHQ6ULP2 937 aa13□□□□□ -0.33
SREBF1-223ENST00000584760 NLRP9Q7RTR0 991 aa13□□□□□ -0.33
SREBF1-223ENST00000584760 TAS2R42Q7RTR8 314 aa13□□□□□ -0.33
SREBF1-223ENST00000584760 VASH2Q86V25 355 aa13□□□□□ -0.33
SREBF1-223ENST00000584760 ZFAND4Q86XD8 727 aa13□□□□□ -0.33
SREBF1-223ENST00000584760 FAM129CQ86XR2 697 aa13□□□□□ -0.33
SREBF1-223ENST00000584760 DTX1Q86Y01 620 aa13□□□□□ -0.33
SREBF1-223ENST00000584760 CFAP206Q8IYR0 622 aa13□□□□□ -0.33
SREBF1-223ENST00000584760 COG1Q8WTW3 980 aa13□□□□□ -0.33
SREBF1-223ENST00000584760 ART4Q93070 314 aa13□□□□□ -0.33
SREBF1-223ENST00000584760 HDAC10Q969S8 669 aa13□□□□□ -0.33
SREBF1-223ENST00000584760 C9orf72Q96LT7 481 aa13□□□□□ -0.33
SREBF1-223ENST00000584760 C12orf66Q96MD2 445 aa13□□□□□ -0.33
SREBF1-223ENST00000584760 TGM7Q96PF1 710 aa13□□□□□ -0.33
SREBF1-223ENST00000584760 TAAR9Q96RI9 348 aa13□□□□□ -0.33
SREBF1-223ENST00000584760 INSM2Q96T92 566 aaPredicted RBP13□□□□□ -0.33
SREBF1-223ENST00000584760 VPS37BQ9H9H4 285 aa13□□□□□ -0.33
SREBF1-223ENST00000584760 SIDT1Q9NXL6 827 aaKnown RBP13□□□□□ -0.33
SREBF1-223ENST00000584760 KLHL3Q9UH77 587 aa13□□□□□ -0.33
SREBF1-223ENST00000584760 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.99□□□□□ -0.33
SREBF1-223ENST00000584760 PGRMC1O00264 195 aaKnown RBP12.99□□□□□ -0.33
SREBF1-223ENST00000584760 CAPN5O15484 640 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms