RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-231	ENST00000584063	SLC11A1	P49279	550 aa		11.46	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	SST	P61278	116 aa		11.46	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	IKBKE	Q14164	716 aa		11.46	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	FAM83E	Q2M2I3	478 aa		11.46	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	VPS26B	Q4G0F5	336 aa		11.46	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	BTBD8	Q5XKL5	378 aa		11.46	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	PM20D1	Q6GTS8	502 aa		11.46	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	ZBTB49	Q6ZSB9	765 aa		11.46	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	CCDC149	Q6ZUS6	474 aa		11.46	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	SCD5	Q86SK9	330 aa		11.46	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	MIB1	Q86YT6	1006 aa		11.46	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	ZNF527	Q8NB42	609 aa		11.46	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	SMIM14	Q96QK8	99 aa		11.46	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	BTBD2	Q9BX70	525 aa		11.46	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	IL22	Q9GZX6	179 aa		11.46	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	RBM38	Q9H0Z9	239 aa	Known RBP	11.46	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	SLC39A1	Q9NY26	324 aa		11.46	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	NCKIPSD	Q9NZQ3	722 aa		11.46	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	USP22	Q9UPT9	525 aa		11.46	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	BTRC	Q9Y297	605 aa		11.46	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063		A0A1W2PQH9	124 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063		K7EPI3	171 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	UBFD1	O14562	309 aa	Known RBP	11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	MRAS	O14807	208 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	ENO2	P09104	434 aa	Predicted RBP	11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	CLTB	P09497	229 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	NCK1	P16333	377 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	CDH2	P19022	906 aa	Predicted RBP	11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	PRDX6	P30041	224 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	ARCN1	P48444	511 aa	Known RBP	11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	ALDH7A1	P49419	539 aa	Known RBP	11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	HPCA	P84074	193 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	TRAP1	Q12931	704 aa	Known RBP	11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	TRIM25	Q14258	630 aa	Known RBP	11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	GPR158	Q5T848	1215 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	KIAA1841	Q6NSI8	718 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	WDR73	Q6P4I2	378 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	PKN3	Q6P5Z2	889 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	PDZD4	Q76G19	769 aa	Predicted RBP	11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	CUZD1	Q86UP6	607 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	TSPYL5	Q86VY4	417 aa	Predicted RBP	11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	TICAM1	Q8IUC6	712 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	SLC9A6	Q92581	669 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	ESAM	Q96AP7	390 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	MYEOV	Q96EZ4	313 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	ZC3H10	Q96K80	434 aa	Known RBP	11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	MRGPRX2	Q96LB1	330 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	SLC9A7	Q96T83	725 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	TRIM62	Q9BVG3	475 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	MRPS26	Q9BYN8	205 aa	Known RBP	11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	GLOD4	Q9HC38	313 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	PAK6	Q9NQU5	681 aa	Predicted RBP	11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	UCKL1	Q9NWZ5	548 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	CACNA2D2	Q9NY47	1150 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	COQ3	Q9NZJ6	369 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	RAB26	Q9ULW5	256 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	CEPT1	Q9Y6K0	416 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	XIRP2	A4UGR9	3374 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063		M0R3H8	397 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	TRIM38	O00635	465 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	HAPLN1	P10915	354 aa	Predicted RBP	11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	IFNA8	P32881	189 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	XIAP	P98170	497 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	NAB1	Q13506	487 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	COTL1	Q14019	142 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	RTP2	Q5QGT7	225 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	FAM171B	Q6P995	826 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	SLC39A5	Q6ZMH5	540 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	TMPRSS9	Q7Z410	1059 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	ZNF321P	Q8N8H1	164 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	FBXO15	Q8NCQ5	510 aa	Predicted RBP	11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	ADCY4	Q8NFM4	1077 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	OR7G1	Q8NGA0	311 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	CALML6	Q8TD86	181 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	CYGB	Q8WWM9	190 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	STARD8	Q92502	1023 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	DACT3	Q96B18	629 aa	Predicted RBP	11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	NSUN5	Q96P11	429 aa	Known RBP	11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	COQ7	Q99807	217 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	KIFC1	Q9BW19	673 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	TDRD1	Q9BXT4	1180 aa	Known RBP	11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	EMILIN2	Q9BXX0	1053 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	TFB2M	Q9H5Q4	396 aa	Known RBP	11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	TRPV4	Q9HBA0	871 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	PTTG2	Q9NZH5	202 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	FBXO5	Q9UKT4	447 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	CNOT6	Q9ULM6	557 aa	Known RBP	11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	CDC14A	Q9UNH5	594 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	AP1M2	Q9Y6Q5	423 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	SZT2	Q5T011	3432 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063		A0A0J9YVX5	310 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063		A0A1B0GTL3	188 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	NCF1B	A6NI72	391 aa	Predicted RBP	11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063		A8MT66	165 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	NCF1C	A8MVU1	366 aa	Predicted RBP	11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	TARM1	B6A8C7	271 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	KPNA5	O15131	536 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	IRAK2	O43187	625 aa		11.45	□□□□□ -0.58
CDK5RAP3-231	ENST00000584063	ARHGEF15	O94989	841 aa		11.45	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 23 ms