RNA–Protein interactions for RNA: ENST00000583930.5

CCDC178-213, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 3,094 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-213ENST00000583930 RGS9BPQ6ZS82 235 aa2.99□□□□□ -1.93
CCDC178-213ENST00000583930 USP45Q70EL2 814 aa2.99□□□□□ -1.93
CCDC178-213ENST00000583930 PARS2Q7L3T8 475 aaKnown RBP2.99□□□□□ -1.93
CCDC178-213ENST00000583930 KIRREL3Q8IZU9 778 aa2.99□□□□□ -1.93
CCDC178-213ENST00000583930 OR13J1Q8NGT2 312 aa2.99□□□□□ -1.93
CCDC178-213ENST00000583930 ATRIPQ8WXE1 791 aa2.99□□□□□ -1.93
CCDC178-213ENST00000583930 NDRG1Q92597 394 aaKnown RBP2.99□□□□□ -1.93
CCDC178-213ENST00000583930 NTNG2Q96CW9 530 aa2.99□□□□□ -1.93
CCDC178-213ENST00000583930 MTBPQ96DY7 904 aa2.99□□□□□ -1.93
CCDC178-213ENST00000583930 CCDC140Q96MF4 163 aa2.99□□□□□ -1.93
CCDC178-213ENST00000583930 CCM2Q9BSQ5 444 aa2.99□□□□□ -1.93
CCDC178-213ENST00000583930 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP2.99□□□□□ -1.93
CCDC178-213ENST00000583930 RPP25Q9BUL9 199 aaKnown RBP2.99□□□□□ -1.93
CCDC178-213ENST00000583930 CINPQ9BW66 212 aaPredicted RBP2.99□□□□□ -1.93
CCDC178-213ENST00000583930 AP1M1Q9BXS5 423 aa2.99□□□□□ -1.93
CCDC178-213ENST00000583930 SMOC1Q9H4F8 434 aa2.99□□□□□ -1.93
CCDC178-213ENST00000583930 CARS2Q9HA77 564 aaKnown RBP2.99□□□□□ -1.93
CCDC178-213ENST00000583930 SYTL2Q9HCH5 934 aa2.99□□□□□ -1.93
CCDC178-213ENST00000583930 RIC8BQ9NVN3 520 aa2.99□□□□□ -1.93
CCDC178-213ENST00000583930 SPATA7Q9P0W8 599 aa2.99□□□□□ -1.93
CCDC178-213ENST00000583930 TRIM10Q9UDY6 481 aa2.99□□□□□ -1.93
CCDC178-213ENST00000583930 VANGL2Q9ULK5 521 aa2.99□□□□□ -1.93
CCDC178-213ENST00000583930 ZFR2Q9UPR6 939 aaKnown RBP2.99□□□□□ -1.93
CCDC178-213ENST00000583930 APOBEC2Q9Y235 224 aaKnown RBP2.99□□□□□ -1.93
CCDC178-213ENST00000583930 R3HDM2Q9Y2K5 976 aaKnown RBP2.99□□□□□ -1.93
CCDC178-213ENST00000583930 ZNF711Q9Y462 761 aa2.99□□□□□ -1.93
CCDC178-213ENST00000583930 PCDHGB6Q9Y5F9 930 aa2.99□□□□□ -1.93
CCDC178-213ENST00000583930 NFS1Q9Y697 457 aa2.99□□□□□ -1.93
CCDC178-213ENST00000583930 C16orf96A6NNT2 1141 aa2.99□□□□□ -1.93
CCDC178-213ENST00000583930 IQCJ-SCHIP1C9J366 451 aaPredicted RBP2.99□□□□□ -1.93
CCDC178-213ENST00000583930 NEDD8-MDP1E9PL57 170 aa2.99□□□□□ -1.93
CCDC178-213ENST00000583930 GOLGA8SH3BPF8 625 aa2.99□□□□□ -1.93
CCDC178-213ENST00000583930 TNFSF14O43557 240 aa2.99□□□□□ -1.93
CCDC178-213ENST00000583930 BUB1O43683 1085 aa2.99□□□□□ -1.93
CCDC178-213ENST00000583930 NUAK1O60285 661 aa2.99□□□□□ -1.93
CCDC178-213ENST00000583930 PSPNO60542 156 aa2.99□□□□□ -1.93
CCDC178-213ENST00000583930 RNASEH1O60930 286 aaKnown RBP2.99□□□□□ -1.93
CCDC178-213ENST00000583930 RPP40O75818 363 aaKnown RBP2.99□□□□□ -1.93
CCDC178-213ENST00000583930 SLCO2B1O94956 709 aa2.99□□□□□ -1.93
CCDC178-213ENST00000583930 MATN4O95460 622 aa2.99□□□□□ -1.93
CCDC178-213ENST00000583930 IL33O95760 270 aa2.99□□□□□ -1.93
CCDC178-213ENST00000583930 C9P02748 559 aa2.99□□□□□ -1.93
CCDC178-213ENST00000583930 XRCC1P18887 633 aaPredicted RBP2.99□□□□□ -1.93
CCDC178-213ENST00000583930 FDXRP22570 491 aa2.99□□□□□ -1.93
CCDC178-213ENST00000583930 CASP2P42575 452 aa2.99□□□□□ -1.93
CCDC178-213ENST00000583930 FASLGP48023 281 aa2.99□□□□□ -1.93
CCDC178-213ENST00000583930 CCNHP51946 323 aaPredicted RBP2.99□□□□□ -1.93
CCDC178-213ENST00000583930 TIAL1Q01085 375 aaKnown RBP eCLIP2.99□□□□□ -1.93
CCDC178-213ENST00000583930 CACNG1Q06432 222 aa2.99□□□□□ -1.93
CCDC178-213ENST00000583930 TRA2AQ13595 282 aaKnown RBP eCLIP2.99□□□□□ -1.93
CCDC178-213ENST00000583930 ITGA9Q13797 1035 aa2.99□□□□□ -1.93
CCDC178-213ENST00000583930 NFATC4Q14934 902 aa2.99□□□□□ -1.93
CCDC178-213ENST00000583930 KYNUQ16719 465 aa2.99□□□□□ -1.93
CCDC178-213ENST00000583930 PLK5Q496M5 336 aa2.99□□□□□ -1.93
CCDC178-213ENST00000583930 TOR2AQ5JU69 321 aa2.99□□□□□ -1.93
CCDC178-213ENST00000583930 SIRPB2Q5JXA9 342 aa2.99□□□□□ -1.93
CCDC178-213ENST00000583930 CAPRIN2Q6IMN6 1127 aaKnown RBP2.99□□□□□ -1.93
CCDC178-213ENST00000583930 ABRAXAS1Q6UWZ7 409 aa2.99□□□□□ -1.93
CCDC178-213ENST00000583930 PRSS42Q7Z5A4 293 aa2.99□□□□□ -1.93
CCDC178-213ENST00000583930 SNX20Q7Z614 316 aa2.99□□□□□ -1.93
CCDC178-213ENST00000583930 C11orf96Q7Z7L8 435 aa2.99□□□□□ -1.93
CCDC178-213ENST00000583930 KMT5CQ86Y97 462 aa2.99□□□□□ -1.93
CCDC178-213ENST00000583930 NOA1Q8NC60 698 aaKnown RBP2.99□□□□□ -1.93
CCDC178-213ENST00000583930 RHEBL1Q8TAI7 183 aa2.99□□□□□ -1.93
CCDC178-213ENST00000583930 GABPB2Q8TAK5 448 aaPredicted RBP2.99□□□□□ -1.93
CCDC178-213ENST00000583930 PPP1R35Q8TAP8 253 aa2.99□□□□□ -1.93
CCDC178-213ENST00000583930 RDH11Q8TC12 318 aa2.99□□□□□ -1.93
CCDC178-213ENST00000583930 CALML6Q8TD86 181 aa2.99□□□□□ -1.93
CCDC178-213ENST00000583930 NSMCE1Q8WV22 266 aa2.99□□□□□ -1.93
CCDC178-213ENST00000583930 JADE3Q92613 823 aa2.99□□□□□ -1.93
CCDC178-213ENST00000583930 FAM149B1Q96BN6 582 aa2.99□□□□□ -1.93
CCDC178-213ENST00000583930 CABS1Q96KC9 395 aa2.99□□□□□ -1.93
CCDC178-213ENST00000583930 FCRL1Q96LA6 429 aa2.99□□□□□ -1.93
CCDC178-213ENST00000583930 EBNA1BP2Q99848 306 aaKnown RBP2.99□□□□□ -1.93
CCDC178-213ENST00000583930 MENTQ9BUN1 341 aa2.99□□□□□ -1.93
CCDC178-213ENST00000583930 PDCL3Q9H2J4 239 aa2.99□□□□□ -1.93
CCDC178-213ENST00000583930 EHD1Q9H4M9 534 aa2.99□□□□□ -1.93
CCDC178-213ENST00000583930 KIR3DX1Q9H7L2 352 aa2.99□□□□□ -1.93
CCDC178-213ENST00000583930 DMRT3Q9NQL9 472 aa2.99□□□□□ -1.93
CCDC178-213ENST00000583930 CCM2LQ9NUG4 571 aaPredicted RBP2.99□□□□□ -1.93
CCDC178-213ENST00000583930 PKD2L2Q9NZM6 624 aa2.99□□□□□ -1.93
CCDC178-213ENST00000583930 WASF3Q9UPY6 502 aa2.99□□□□□ -1.93
CCDC178-213ENST00000583930 ANKRD6Q9Y2G4 727 aa2.99□□□□□ -1.93
CCDC178-213ENST00000583930 RAXQ9Y2V3 346 aa2.99□□□□□ -1.93
CCDC178-213ENST00000583930 TTLL3Q9Y4R7 772 aa2.99□□□□□ -1.93
CCDC178-213ENST00000583930 A0A0D9SEW6 157 aa2.98□□□□□ -1.93
CCDC178-213ENST00000583930 LRRC72A6NJI9 287 aa2.98□□□□□ -1.93
CCDC178-213ENST00000583930 OR5K4A6NMS3 321 aa2.98□□□□□ -1.93
CCDC178-213ENST00000583930 H0Y626 953 aa2.98□□□□□ -1.93
CCDC178-213ENST00000583930 J3KR12 359 aa2.98□□□□□ -1.93
CCDC178-213ENST00000583930 SGK1O00141 431 aa2.98□□□□□ -1.93
CCDC178-213ENST00000583930 MYO1CO00159 1063 aa2.98□□□□□ -1.93
CCDC178-213ENST00000583930 MATN2O00339 956 aa2.98□□□□□ -1.93
CCDC178-213ENST00000583930 PRICKLE3O43900 615 aaPredicted RBP2.98□□□□□ -1.93
CCDC178-213ENST00000583930 GPC4O75487 556 aa2.98□□□□□ -1.93
CCDC178-213ENST00000583930 FGGP02679 453 aa2.98□□□□□ -1.93
CCDC178-213ENST00000583930 RBP3P10745 1247 aa2.98□□□□□ -1.93
CCDC178-213ENST00000583930 HRH2P25021 359 aa2.98□□□□□ -1.93
CCDC178-213ENST00000583930 SERPINB1P30740 379 aa2.98□□□□□ -1.93
CCDC178-213ENST00000583930 MC4RP32245 332 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms