RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 PTOV1Q86YD1 416 aa5.33□□□□□ -1.56
SMARCE1-219ENST00000583294 MAB21L3Q8N8X9 362 aa5.33□□□□□ -1.56
SMARCE1-219ENST00000583294 RDM1Q8NG50 284 aa5.33□□□□□ -1.56
SMARCE1-219ENST00000583294 OR13A1Q8NGR1 328 aa5.33□□□□□ -1.56
SMARCE1-219ENST00000583294 OR2AJ1Q8NGZ0 328 aa5.33□□□□□ -1.56
SMARCE1-219ENST00000583294 CFAP61Q8NHU2 1237 aa5.33□□□□□ -1.56
SMARCE1-219ENST00000583294 SMPDL3BQ92485 455 aa5.33□□□□□ -1.56
SMARCE1-219ENST00000583294 PGAP3Q96FM1 320 aaPredicted RBP5.33□□□□□ -1.56
SMARCE1-219ENST00000583294 NEK1Q96PY6 1258 aa5.33□□□□□ -1.56
SMARCE1-219ENST00000583294 SLX1AQ9BQ83 275 aa5.33□□□□□ -1.56
SMARCE1-219ENST00000583294 FNDC11Q9BVV2 318 aa5.33□□□□□ -1.56
SMARCE1-219ENST00000583294 TBC1D17Q9HA65 648 aa5.33□□□□□ -1.56
SMARCE1-219ENST00000583294 ABCF3Q9NUQ8 709 aa5.33□□□□□ -1.56
SMARCE1-219ENST00000583294 PTTG2Q9NZH5 202 aa5.33□□□□□ -1.56
SMARCE1-219ENST00000583294 BCCIPQ9P287 314 aaKnown RBP eCLIP5.33□□□□□ -1.56
SMARCE1-219ENST00000583294 A0A0B4J293 547 aa5.32□□□□□ -1.56
SMARCE1-219ENST00000583294 HEPACAM2A8MVW5 462 aa5.32□□□□□ -1.56
SMARCE1-219ENST00000583294 C16orf97H3BN30 126 aa5.32□□□□□ -1.56
SMARCE1-219ENST00000583294 GPR137BO60478 399 aa5.32□□□□□ -1.56
SMARCE1-219ENST00000583294 TADA2AO75478 443 aa5.32□□□□□ -1.56
SMARCE1-219ENST00000583294 MCCP23508 829 aa5.32□□□□□ -1.56
SMARCE1-219ENST00000583294 MMP15P51511 669 aa5.32□□□□□ -1.56
SMARCE1-219ENST00000583294 MLLT10P55197 1068 aa5.32□□□□□ -1.56
SMARCE1-219ENST00000583294 ERVFC1-1P60608 527 aa5.32□□□□□ -1.56
SMARCE1-219ENST00000583294 RPL24P83731 157 aaKnown RBP5.32□□□□□ -1.56
SMARCE1-219ENST00000583294 ALCAMQ13740 583 aa5.32□□□□□ -1.56
SMARCE1-219ENST00000583294 SIRPB2Q5JXA9 342 aa5.32□□□□□ -1.56
SMARCE1-219ENST00000583294 KLC3Q6P597 504 aa5.32□□□□□ -1.56
SMARCE1-219ENST00000583294 CAMKMTQ7Z624 323 aa5.32□□□□□ -1.56
SMARCE1-219ENST00000583294 EXOC3L1Q86VI1 746 aa5.32□□□□□ -1.56
SMARCE1-219ENST00000583294 LONP2Q86WA8 852 aa5.32□□□□□ -1.56
SMARCE1-219ENST00000583294 NAGSQ8N159 534 aa5.32□□□□□ -1.56
SMARCE1-219ENST00000583294 DAZLQ92904 295 aaKnown RBP5.32□□□□□ -1.56
SMARCE1-219ENST00000583294 NXNL1Q96CM4 212 aa5.32□□□□□ -1.56
SMARCE1-219ENST00000583294 SPACA9Q96E40 222 aaPredicted RBP5.32□□□□□ -1.56
SMARCE1-219ENST00000583294 CNDP2Q96KP4 475 aaKnown RBP5.32□□□□□ -1.56
SMARCE1-219ENST00000583294 ZNF830Q96NB3 372 aaPredicted RBP5.32□□□□□ -1.56
SMARCE1-219ENST00000583294 PKP4Q99569 1192 aa5.32□□□□□ -1.56
SMARCE1-219ENST00000583294 OPA3Q9H6K4 179 aa5.32□□□□□ -1.56
SMARCE1-219ENST00000583294 WDR35Q9P2L0 1181 aa5.32□□□□□ -1.56
SMARCE1-219ENST00000583294 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.32□□□□□ -1.563e-7■■■□□ 18.3
SMARCE1-219ENST00000583294 A0A0G2JNG1 304 aa5.31□□□□□ -1.56
SMARCE1-219ENST00000583294 A0A1B0GUV1 79 aa5.31□□□□□ -1.56
SMARCE1-219ENST00000583294 TRBC2A0A5B9 178 aa5.31□□□□□ -1.56
SMARCE1-219ENST00000583294 CTAGE9A4FU28 777 aa5.31□□□□□ -1.56
SMARCE1-219ENST00000583294 DVL1O14640 695 aa5.31□□□□□ -1.56
SMARCE1-219ENST00000583294 BUB3O43684 328 aa5.31□□□□□ -1.56
SMARCE1-219ENST00000583294 SYNCRIPO60506 623 aaKnown RBP5.31□□□□□ -1.56
SMARCE1-219ENST00000583294 TRUB2O95900 331 aaKnown RBP5.31□□□□□ -1.56
SMARCE1-219ENST00000583294 CTAGE8P0CG41 777 aa5.31□□□□□ -1.56
SMARCE1-219ENST00000583294 CPT2P23786 658 aa5.31□□□□□ -1.56
SMARCE1-219ENST00000583294 MC5RP33032 325 aa5.31□□□□□ -1.56
SMARCE1-219ENST00000583294 CCR3P51677 355 aa5.31□□□□□ -1.56
SMARCE1-219ENST00000583294 TERF1P54274 439 aa5.31□□□□□ -1.56
SMARCE1-219ENST00000583294 DVL1P1P54792 670 aaPredicted RBP5.31□□□□□ -1.56
SMARCE1-219ENST00000583294 CDK3Q00526 305 aa5.31□□□□□ -1.56
SMARCE1-219ENST00000583294 KIR2DS5Q14953 304 aa5.31□□□□□ -1.56
SMARCE1-219ENST00000583294 KYNUQ16719 465 aa5.31□□□□□ -1.56
SMARCE1-219ENST00000583294 PACS1Q6VY07 963 aa5.31□□□□□ -1.56
SMARCE1-219ENST00000583294 ZNF852Q6ZMS4 543 aa5.31□□□□□ -1.56
SMARCE1-219ENST00000583294 FAM114A1Q8IWE2 563 aa5.31□□□□□ -1.56
SMARCE1-219ENST00000583294 CTAGE4Q8IX94 777 aa5.31□□□□□ -1.56
SMARCE1-219ENST00000583294 ZNF595Q8IYB9 648 aa5.31□□□□□ -1.56
SMARCE1-219ENST00000583294 TC2NQ8N9U0 490 aa5.31□□□□□ -1.56
SMARCE1-219ENST00000583294 TSPAN14Q8NG11 270 aa5.31□□□□□ -1.56
SMARCE1-219ENST00000583294 OR6J1Q8NGC5 347 aa5.31□□□□□ -1.56
SMARCE1-219ENST00000583294 OR10S1Q8NGN2 331 aa5.31□□□□□ -1.56
SMARCE1-219ENST00000583294 RADILQ96JH8 1075 aa5.31□□□□□ -1.56
SMARCE1-219ENST00000583294 LMLNQ96KR4 655 aa5.31□□□□□ -1.56
SMARCE1-219ENST00000583294 ZNF583Q96ND8 569 aa5.31□□□□□ -1.56
SMARCE1-219ENST00000583294 MOV10L1Q9BXT6 1211 aaKnown RBP5.31□□□□□ -1.56
SMARCE1-219ENST00000583294 DPAGT1Q9H3H5 408 aa5.31□□□□□ -1.56
SMARCE1-219ENST00000583294 FKRPQ9H9S5 495 aa5.31□□□□□ -1.56
SMARCE1-219ENST00000583294 CCDC177Q9NQR7 707 aaPredicted RBP5.31□□□□□ -1.56
SMARCE1-219ENST00000583294 OLAHQ9NV23 265 aa5.31□□□□□ -1.56
SMARCE1-219ENST00000583294 OSER1Q9NX31 292 aa5.31□□□□□ -1.56
SMARCE1-219ENST00000583294 DONSONQ9NYP3 566 aa5.31□□□□□ -1.56
SMARCE1-219ENST00000583294 FAF1Q9UNN5 650 aaPredicted RBP5.31□□□□□ -1.56
SMARCE1-219ENST00000583294 SPIN1Q9Y657 262 aaPredicted RBP5.31□□□□□ -1.56
SMARCE1-219ENST00000583294 RPS6KL1Q9Y6S9 549 aa5.31□□□□□ -1.56
SMARCE1-219ENST00000583294 ZNF541Q9H0D2 1346 aa5.3□□□□□ -1.56
SMARCE1-219ENST00000583294 TEX13DA0A0J9YY54 714 aaPredicted RBP5.3□□□□□ -1.56
SMARCE1-219ENST00000583294 URADA6NGE7 173 aa5.3□□□□□ -1.56
SMARCE1-219ENST00000583294 CAPN9O14815 690 aa5.3□□□□□ -1.56
SMARCE1-219ENST00000583294 SPRY1O43609 319 aaPredicted RBP5.3□□□□□ -1.56
SMARCE1-219ENST00000583294 GGPS1O95749 300 aa5.3□□□□□ -1.56
SMARCE1-219ENST00000583294 CETPP11597 493 aa5.3□□□□□ -1.56
SMARCE1-219ENST00000583294 PFKFB1P16118 471 aa5.3□□□□□ -1.56
SMARCE1-219ENST00000583294 ZNF23P17027 643 aa5.3□□□□□ -1.56
SMARCE1-219ENST00000583294 CKMT2P17540 419 aa5.3□□□□□ -1.56
SMARCE1-219ENST00000583294 CBLP22681 906 aa5.3□□□□□ -1.56
SMARCE1-219ENST00000583294 MBTD1Q05BQ5 628 aa5.3□□□□□ -1.56
SMARCE1-219ENST00000583294 DUOXA1Q1HG43 343 aa5.3□□□□□ -1.56
SMARCE1-219ENST00000583294 PDSS1Q5T2R2 415 aa5.3□□□□□ -1.56
SMARCE1-219ENST00000583294 RNASEH2BQ5TBB1 312 aaKnown RBP5.3□□□□□ -1.56
SMARCE1-219ENST00000583294 RUSC1-AS1Q66K80 236 aa5.3□□□□□ -1.56
SMARCE1-219ENST00000583294 FAM109BQ6ICB4 259 aaPredicted RBP5.3□□□□□ -1.56
SMARCE1-219ENST00000583294 MTERF3Q96E29 417 aa5.3□□□□□ -1.56
SMARCE1-219ENST00000583294 ABHD8Q96I13 439 aa5.3□□□□□ -1.56
SMARCE1-219ENST00000583294 MS4A10Q96PG2 267 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms