RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 MAPRE2Q15555 327 aa9.14□□□□□ -0.95
SS18-220ENST00000582092 DNAL1Q4LDG9 190 aa9.14□□□□□ -0.95
SS18-220ENST00000582092 SLC9B1Q4ZJI4 515 aa9.14□□□□□ -0.95
SS18-220ENST00000582092 UNC50Q53HI1 259 aa9.14□□□□□ -0.95
SS18-220ENST00000582092 C9orf64Q5T6V5 341 aa9.14□□□□□ -0.95
SS18-220ENST00000582092 VWA5B1Q5TIE3 1220 aa9.14□□□□□ -0.95
SS18-220ENST00000582092 FAM91A1Q658Y4 838 aa9.14□□□□□ -0.95
SS18-220ENST00000582092 LIPIQ6XZB0 460 aa9.14□□□□□ -0.95
SS18-220ENST00000582092 ERN2Q76MJ5 926 aaKnown RBP9.14□□□□□ -0.95
SS18-220ENST00000582092 TMPRSS6Q8IU80 811 aa9.14□□□□□ -0.95
SS18-220ENST00000582092 PHYKPLQ8IUZ5 450 aa9.14□□□□□ -0.95
SS18-220ENST00000582092 MMAAQ8IVH4 418 aaKnown RBP9.14□□□□□ -0.95
SS18-220ENST00000582092 RAVER1Q8IY67 606 aaKnown RBP9.14□□□□□ -0.95
SS18-220ENST00000582092 CHPFQ8IZ52 775 aa9.14□□□□□ -0.95
SS18-220ENST00000582092 LSMEM2Q8N112 164 aa9.14□□□□□ -0.95
SS18-220ENST00000582092 ZNF687Q8N1G0 1237 aa9.14□□□□□ -0.95
SS18-220ENST00000582092 KIF2BQ8N4N8 673 aa9.14□□□□□ -0.95
SS18-220ENST00000582092 TEX9Q8N6V9 391 aa9.14□□□□□ -0.95
SS18-220ENST00000582092 ZBTB44Q8NCP5 570 aa9.14□□□□□ -0.95
SS18-220ENST00000582092 DTX3LQ8TDB6 740 aa9.14□□□□□ -0.95
SS18-220ENST00000582092 TRPC4APQ8TEL6 797 aa9.14□□□□□ -0.95
SS18-220ENST00000582092 ELMO1Q92556 727 aa9.14□□□□□ -0.95
SS18-220ENST00000582092 FUBP1Q96AE4 644 aaKnown RBP9.14□□□□□ -0.95
SS18-220ENST00000582092 NUS1Q96E22 293 aa9.14□□□□□ -0.95
SS18-220ENST00000582092 ATOH8Q96SQ7 321 aa9.14□□□□□ -0.95
SS18-220ENST00000582092 PHOX2BQ99453 314 aa9.14□□□□□ -0.95
SS18-220ENST00000582092 ABCG8Q9H221 673 aa9.14□□□□□ -0.95
SS18-220ENST00000582092 SEMA4BQ9NPR2 832 aaPredicted RBP9.14□□□□□ -0.95
SS18-220ENST00000582092 KLC4Q9NSK0 619 aa9.14□□□□□ -0.95
SS18-220ENST00000582092 UTP6Q9NYH9 597 aaKnown RBP9.14□□□□□ -0.95
SS18-220ENST00000582092 THAP10Q9P2Z0 257 aaPredicted RBP9.14□□□□□ -0.95
SS18-220ENST00000582092 GALPQ9UBC7 116 aa9.14□□□□□ -0.95
SS18-220ENST00000582092 PRDM4Q9UKN5 801 aa9.14□□□□□ -0.95
SS18-220ENST00000582092 PPM1HQ9ULR3 514 aa9.14□□□□□ -0.95
SS18-220ENST00000582092 PRSS21Q9Y6M0 314 aa9.14□□□□□ -0.95
SS18-220ENST00000582092 R4GN57 208 aa9.14□□□□□ -0.95
SS18-220ENST00000582092 RIF1Q5UIP0 2472 aaKnown RBP9.13□□□□□ -0.95
SS18-220ENST00000582092 KIAA1549LQ6ZVL6 1849 aa9.13□□□□□ -0.95
SS18-220ENST00000582092 OTOL1A6NHN0 477 aaPredicted RBP9.13□□□□□ -0.95
SS18-220ENST00000582092 PRR5-ARHGAP8B1AHC4 643 aa9.13□□□□□ -0.95
SS18-220ENST00000582092 GAPDHSO14556 408 aaPredicted RBP9.13□□□□□ -0.95
SS18-220ENST00000582092 AZIN1O14977 448 aa9.13□□□□□ -0.95
SS18-220ENST00000582092 UBDO15205 165 aa9.13□□□□□ -0.95
SS18-220ENST00000582092 SLC22A2O15244 555 aa9.13□□□□□ -0.95
SS18-220ENST00000582092 GPR39O43194 453 aa9.13□□□□□ -0.95
SS18-220ENST00000582092 GRID2O43424 1007 aa9.13□□□□□ -0.95
SS18-220ENST00000582092 PCDH8O95206 1070 aa9.13□□□□□ -0.95
SS18-220ENST00000582092 GUCA1CO95843 209 aa9.13□□□□□ -0.95
SS18-220ENST00000582092 ADH1BP00325 375 aa9.13□□□□□ -0.95
SS18-220ENST00000582092 C8GP07360 202 aa9.13□□□□□ -0.95
SS18-220ENST00000582092 ANXA5P08758 320 aa9.13□□□□□ -0.95
SS18-220ENST00000582092 ADRB3P13945 408 aa9.13□□□□□ -0.95
SS18-220ENST00000582092 TSPAN8P19075 237 aa9.13□□□□□ -0.95
SS18-220ENST00000582092 CYP2A7P20853 494 aa9.13□□□□□ -0.95
SS18-220ENST00000582092 EPHA3P29320 983 aa9.13□□□□□ -0.95
SS18-220ENST00000582092 HOXA6P31267 233 aa9.13□□□□□ -0.95
SS18-220ENST00000582092 PGM1P36871 562 aa9.13□□□□□ -0.95
SS18-220ENST00000582092 MMP12P39900 470 aa9.13□□□□□ -0.95
SS18-220ENST00000582092 OPRD1P41143 372 aa9.13□□□□□ -0.95
SS18-220ENST00000582092 MAPK9P45984 424 aa9.13□□□□□ -0.95
SS18-220ENST00000582092 KCNC1P48547 511 aa9.13□□□□□ -0.95
SS18-220ENST00000582092 PIK3CGP48736 1102 aa9.13□□□□□ -0.95
SS18-220ENST00000582092 CCNG1P51959 295 aa9.13□□□□□ -0.95
SS18-220ENST00000582092 COPAP53621 1224 aa9.13□□□□□ -0.95
SS18-220ENST00000582092 CDH13P55290 713 aa9.13□□□□□ -0.95
SS18-220ENST00000582092 ELF3P78545 371 aaPredicted RBP9.13□□□□□ -0.95
SS18-220ENST00000582092 ARHGAP8P85298 464 aa9.13□□□□□ -0.95
SS18-220ENST00000582092 HSPA14Q0VDF9 509 aa9.13□□□□□ -0.95
SS18-220ENST00000582092 LCP2Q13094 533 aa9.13□□□□□ -0.95
SS18-220ENST00000582092 BOP1Q14137 746 aaKnown RBP9.13□□□□□ -0.95
SS18-220ENST00000582092 UBAP2LQ14157 1087 aaKnown RBP9.13□□□□□ -0.95
SS18-220ENST00000582092 TGFBIQ15582 683 aa9.13□□□□□ -0.95
SS18-220ENST00000582092 LSM12Q3MHD2 195 aaKnown RBP9.13□□□□□ -0.95
SS18-220ENST00000582092 HSF5Q4G112 596 aaPredicted RBP9.13□□□□□ -0.95
SS18-220ENST00000582092 PLEKHS1Q5SXH7 462 aa9.13□□□□□ -0.95
SS18-220ENST00000582092 SULT1C3Q6IMI6 304 aa9.13□□□□□ -0.95
SS18-220ENST00000582092 PARS2Q7L3T8 475 aaKnown RBP9.13□□□□□ -0.95
SS18-220ENST00000582092 TRMT11Q7Z4G4 463 aaKnown RBP9.13□□□□□ -0.95
SS18-220ENST00000582092 MAML2Q8IZL2 1156 aaPredicted RBP9.13□□□□□ -0.95
SS18-220ENST00000582092 TCAIMQ8N3R3 496 aa9.13□□□□□ -0.95
SS18-220ENST00000582092 CAMKK1Q8N5S9 505 aa9.13□□□□□ -0.95
SS18-220ENST00000582092 ZNF513Q8N8E2 541 aaPredicted RBP9.13□□□□□ -0.95
SS18-220ENST00000582092 MCOLN3Q8TDD5 553 aa9.13□□□□□ -0.95
SS18-220ENST00000582092 BTN2A2Q8WVV5 523 aa9.13□□□□□ -0.95
SS18-220ENST00000582092 ASZ1Q8WWH4 475 aa9.13□□□□□ -0.95
SS18-220ENST00000582092 STON2Q8WXE9 905 aa9.13□□□□□ -0.95
SS18-220ENST00000582092 SCAMP4Q969E2 229 aa9.13□□□□□ -0.95
SS18-220ENST00000582092 GLYATL1Q969I3 302 aa9.13□□□□□ -0.95
SS18-220ENST00000582092 TMEM159Q96B96 161 aa9.13□□□□□ -0.95
SS18-220ENST00000582092 MOCOSQ96EN8 888 aa9.13□□□□□ -0.95
SS18-220ENST00000582092 SLC30A3Q99726 388 aa9.13□□□□□ -0.95
SS18-220ENST00000582092 CCDC106Q9BWC9 280 aa9.13□□□□□ -0.95
SS18-220ENST00000582092 MMADHCQ9H3L0 296 aaPredicted RBP9.13□□□□□ -0.95
SS18-220ENST00000582092 GSTO2Q9H4Y5 243 aa9.13□□□□□ -0.95
SS18-220ENST00000582092 WDR55Q9H6Y2 383 aaPredicted RBP9.13□□□□□ -0.95
SS18-220ENST00000582092 SMOXQ9NWM0 555 aa9.13□□□□□ -0.95
SS18-220ENST00000582092 NDE1Q9NXR1 346 aa9.13□□□□□ -0.95
SS18-220ENST00000582092 NCDNQ9UBB6 729 aa9.13□□□□□ -0.95
SS18-220ENST00000582092 BAIAP2L1Q9UHR4 511 aa9.13□□□□□ -0.95
SS18-220ENST00000582092 GMEB2Q9UKD1 530 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms