RNA–Protein interactions for RNA: ENST00000579466.1

MSI2-208, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 186 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-208	ENST00000579466	GPR83	Q9NYM4	423 aa		9.38	□□□□□ -0.91
MSI2-208	ENST00000579466	TMEM63C	Q9P1W3	806 aa		9.38	□□□□□ -0.91
MSI2-208	ENST00000579466	SLC24A2	Q9UI40	661 aa		9.38	□□□□□ -0.91
MSI2-208	ENST00000579466	TCFL5	Q9UL49	500 aa		9.38	□□□□□ -0.91
MSI2-208	ENST00000579466	BZW2	Q9Y6E2	419 aa	Known RBP	9.38	□□□□□ -0.91
MSI2-208	ENST00000579466	DIDO1	Q9BTC0	2240 aa	Known RBP	9.37	□□□□□ -0.91
MSI2-208	ENST00000579466	ABCA12	Q86UK0	2595 aa		9.37	□□□□□ -0.91
MSI2-208	ENST00000579466	GOLGA6L22	H0YM25	854 aa		9.37	□□□□□ -0.91
MSI2-208	ENST00000579466	MASP2	O00187	686 aa		9.37	□□□□□ -0.91
MSI2-208	ENST00000579466	MEN1	O00255	615 aa		9.37	□□□□□ -0.91
MSI2-208	ENST00000579466	SLC35G4	P0C7Q5	338 aa		9.37	□□□□□ -0.91
MSI2-208	ENST00000579466	MSH3	P20585	1137 aa		9.37	□□□□□ -0.91
MSI2-208	ENST00000579466	CYP2A7	P20853	494 aa		9.37	□□□□□ -0.91
MSI2-208	ENST00000579466	LPO	P22079	712 aa	Predicted RBP	9.37	□□□□□ -0.91
MSI2-208	ENST00000579466	PTPN3	P26045	913 aa		9.37	□□□□□ -0.91
MSI2-208	ENST00000579466	HNRNPH3	P31942	346 aa	Known RBP	9.37	□□□□□ -0.91
MSI2-208	ENST00000579466	HMGCL	P35914	325 aa		9.37	□□□□□ -0.91
MSI2-208	ENST00000579466	TNNT3	P45378	269 aa	Predicted RBP	9.37	□□□□□ -0.91
MSI2-208	ENST00000579466	VAV2	P52735	878 aa		9.37	□□□□□ -0.91
MSI2-208	ENST00000579466	WNT3A	P56704	352 aa		9.37	□□□□□ -0.91
MSI2-208	ENST00000579466	GSDMD	P57764	484 aa		9.37	□□□□□ -0.91
MSI2-208	ENST00000579466	DMPK	Q09013	629 aa		9.37	□□□□□ -0.91
MSI2-208	ENST00000579466	PRKAA1	Q13131	559 aa		9.37	□□□□□ -0.91
MSI2-208	ENST00000579466	NR1I3	Q14994	352 aa		9.37	□□□□□ -0.91
MSI2-208	ENST00000579466	ODF2	Q5BJF6	829 aa		9.37	□□□□□ -0.91
MSI2-208	ENST00000579466	FIGN	Q5HY92	759 aa		9.37	□□□□□ -0.91
MSI2-208	ENST00000579466	SIRPB2	Q5JXA9	342 aa		9.37	□□□□□ -0.91
MSI2-208	ENST00000579466	LDLRAP1	Q5SW96	308 aa		9.37	□□□□□ -0.91
MSI2-208	ENST00000579466	PLEKHS1	Q5SXH7	462 aa		9.37	□□□□□ -0.91
MSI2-208	ENST00000579466	IZUMO3	Q5VZ72	239 aa		9.37	□□□□□ -0.91
MSI2-208	ENST00000579466	PAPD7	Q5XG87	772 aa	Known RBP	9.37	□□□□□ -0.91
MSI2-208	ENST00000579466	SLC9A4	Q6AI14	798 aa		9.37	□□□□□ -0.91
MSI2-208	ENST00000579466	FAM198B	Q6UWH4	519 aa		9.37	□□□□□ -0.91
MSI2-208	ENST00000579466	DAAM2	Q86T65	1068 aa		9.37	□□□□□ -0.91
MSI2-208	ENST00000579466	BPHL	Q86WA6	291 aa	Predicted RBP	9.37	□□□□□ -0.91
MSI2-208	ENST00000579466	SYTL1	Q8IYJ3	562 aa		9.37	□□□□□ -0.91
MSI2-208	ENST00000579466	DSEL	Q8IZU8	1212 aa		9.37	□□□□□ -0.91
MSI2-208	ENST00000579466	CISD2	Q8N5K1	135 aa	Known RBP	9.37	□□□□□ -0.91
MSI2-208	ENST00000579466	LILRA3	Q8N6C8	439 aa	Predicted RBP	9.37	□□□□□ -0.91
MSI2-208	ENST00000579466	DDHD1	Q8NEL9	900 aa		9.37	□□□□□ -0.91
MSI2-208	ENST00000579466	OR4E2	Q8NGC2	313 aa		9.37	□□□□□ -0.91
MSI2-208	ENST00000579466	OR1L3	Q8NH93	324 aa		9.37	□□□□□ -0.91
MSI2-208	ENST00000579466	BRSK1	Q8TDC3	778 aa		9.37	□□□□□ -0.91
MSI2-208	ENST00000579466	PNPLA2	Q96AD5	504 aa		9.37	□□□□□ -0.91
MSI2-208	ENST00000579466	RMDN2	Q96LZ7	410 aa		9.37	□□□□□ -0.91
MSI2-208	ENST00000579466	OLFM3	Q96PB7	478 aa		9.37	□□□□□ -0.91
MSI2-208	ENST00000579466	CD180	Q99467	661 aa		9.37	□□□□□ -0.91
MSI2-208	ENST00000579466	BPIFA3	Q9BQP9	254 aa		9.37	□□□□□ -0.91
MSI2-208	ENST00000579466	ACTR5	Q9H9F9	607 aa	Predicted RBP	9.37	□□□□□ -0.91
MSI2-208	ENST00000579466	ASF1B	Q9NVP2	202 aa		9.37	□□□□□ -0.91
MSI2-208	ENST00000579466	SEMA5B	Q9P283	1151 aa		9.37	□□□□□ -0.91
MSI2-208	ENST00000579466	SAE1	Q9UBE0	346 aa	Predicted RBP	9.37	□□□□□ -0.91
MSI2-208	ENST00000579466	HYOU1	Q9Y4L1	999 aa		9.37	□□□□□ -0.91
MSI2-208	ENST00000579466	CROCC	Q5TZA2	2017 aa		9.37	□□□□□ -0.91
MSI2-208	ENST00000579466	CRYBG3	Q68DQ2	2970 aa		9.37	□□□□□ -0.91
MSI2-208	ENST00000579466	SEC16A	O15027	2179 aa		9.37	□□□□□ -0.91
MSI2-208	ENST00000579466	LRBA	P50851	2863 aa		9.37	□□□□□ -0.91
MSI2-208	ENST00000579466	LDB2	O43679	373 aa		9.36	□□□□□ -0.91
MSI2-208	ENST00000579466	CEACAM4	O75871	244 aa		9.36	□□□□□ -0.91
MSI2-208	ENST00000579466	PRAMEF1	O95521	474 aa		9.36	□□□□□ -0.91
MSI2-208	ENST00000579466	DDAH2	O95865	285 aa		9.36	□□□□□ -0.91
MSI2-208	ENST00000579466	H2AFZ	P0C0S5	128 aa		9.36	□□□□□ -0.91
MSI2-208	ENST00000579466	PVR	P15151	417 aa		9.36	□□□□□ -0.91
MSI2-208	ENST00000579466	CD68	P34810	354 aa	Predicted RBP	9.36	□□□□□ -0.91
MSI2-208	ENST00000579466	PREP	P48147	710 aa		9.36	□□□□□ -0.91
MSI2-208	ENST00000579466	FOXL2	P58012	376 aa		9.36	□□□□□ -0.91
MSI2-208	ENST00000579466	ZBED6	P86452	979 aa		9.36	□□□□□ -0.91
MSI2-208	ENST00000579466	SLC9A5	Q14940	896 aa		9.36	□□□□□ -0.91
MSI2-208	ENST00000579466	LONRF2	Q1L5Z9	754 aa		9.36	□□□□□ -0.91
MSI2-208	ENST00000579466	TEX44	Q53QW1	395 aa		9.36	□□□□□ -0.91
MSI2-208	ENST00000579466	CLEC17A	Q6ZS10	378 aa		9.36	□□□□□ -0.91
MSI2-208	ENST00000579466	H2AFV	Q71UI9	128 aa		9.36	□□□□□ -0.91
MSI2-208	ENST00000579466	ZBTB2	Q8N680	514 aa		9.36	□□□□□ -0.91
MSI2-208	ENST00000579466	TADA1	Q96BN2	335 aa		9.36	□□□□□ -0.91
MSI2-208	ENST00000579466	HAUS1	Q96CS2	278 aa		9.36	□□□□□ -0.91
MSI2-208	ENST00000579466	SNRNP40	Q96DI7	357 aa	Known RBP	9.36	□□□□□ -0.91
MSI2-208	ENST00000579466	SGSM3	Q96HU1	749 aa		9.36	□□□□□ -0.91
MSI2-208	ENST00000579466	NLN	Q9BYT8	704 aa		9.36	□□□□□ -0.91
MSI2-208	ENST00000579466	ILKAP	Q9H0C8	392 aa	Predicted RBP	9.36	□□□□□ -0.91
MSI2-208	ENST00000579466	PCMTD2	Q9NV79	361 aa		9.36	□□□□□ -0.91
MSI2-208	ENST00000579466	IL17C	Q9P0M4	197 aa		9.36	□□□□□ -0.91
MSI2-208	ENST00000579466	KLHL8	Q9P2G9	620 aa	Predicted RBP	9.36	□□□□□ -0.91
MSI2-208	ENST00000579466	UVRAG	Q9P2Y5	699 aa		9.36	□□□□□ -0.91
MSI2-208	ENST00000579466	FAM153A	Q9UHL3	310 aa		9.36	□□□□□ -0.91
MSI2-208	ENST00000579466	POMT2	Q9UKY4	750 aa		9.36	□□□□□ -0.91
MSI2-208	ENST00000579466	BTRC	Q9Y297	605 aa		9.36	□□□□□ -0.91
MSI2-208	ENST00000579466	PKP3	Q9Y446	797 aa		9.36	□□□□□ -0.91
MSI2-208	ENST00000579466	CELSR2	Q9HCU4	2923 aa		9.35	□□□□□ -0.91
MSI2-208	ENST00000579466	SNRNP200	O75643	2136 aa	Known RBP	9.35	□□□□□ -0.91
MSI2-208	ENST00000579466	SVIL	O95425	2214 aa		9.35	□□□□□ -0.91
MSI2-208	ENST00000579466		A0A1W2PQJ5	194 aa		9.35	□□□□□ -0.91
MSI2-208	ENST00000579466	SSU72P8	A0A1W2PR75	194 aa		9.35	□□□□□ -0.91
MSI2-208	ENST00000579466	C3orf70	A6NLC5	250 aa	Predicted RBP	9.35	□□□□□ -0.91
MSI2-208	ENST00000579466		C9J4A7	227 aa		9.35	□□□□□ -0.91
MSI2-208	ENST00000579466	GAPDHS	O14556	408 aa	Predicted RBP	9.35	□□□□□ -0.91
MSI2-208	ENST00000579466	STX7	O15400	261 aa	Known RBP	9.35	□□□□□ -0.91
MSI2-208	ENST00000579466	KCNJ13	O60928	360 aa		9.35	□□□□□ -0.91
MSI2-208	ENST00000579466	MBD3	O95983	291 aa		9.35	□□□□□ -0.91
MSI2-208	ENST00000579466	LDLR	P01130	860 aa		9.35	□□□□□ -0.91
MSI2-208	ENST00000579466	GYPC	P04921	128 aa		9.35	□□□□□ -0.91

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms