RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 DTX1Q86Y01 620 aa14.51□□□□□ -0.09
SS18-212ENST00000579061 CFAP206Q8IYR0 622 aa14.51□□□□□ -0.09
SS18-212ENST00000579061 PPHLN1Q8NEY8 458 aaKnown RBP14.51□□□□□ -0.09
SS18-212ENST00000579061 GPR150Q8NGU9 434 aa14.51□□□□□ -0.09
SS18-212ENST00000579061 ART4Q93070 314 aa14.51□□□□□ -0.09
SS18-212ENST00000579061 HDAC10Q969S8 669 aa14.51□□□□□ -0.09
SS18-212ENST00000579061 ZDHHC12Q96GR4 267 aa14.51□□□□□ -0.09
SS18-212ENST00000579061 C12orf66Q96MD2 445 aa14.51□□□□□ -0.09
SS18-212ENST00000579061 CCNL2Q96S94 520 aaPredicted RBP14.51□□□□□ -0.09
SS18-212ENST00000579061 ZPBPQ9BS86 351 aa14.51□□□□□ -0.09
SS18-212ENST00000579061 IL22Q9GZX6 179 aa14.51□□□□□ -0.09
SS18-212ENST00000579061 KCNF1Q9H3M0 494 aa14.51□□□□□ -0.09
SS18-212ENST00000579061 COG4Q9H9E3 785 aa14.51□□□□□ -0.09
SS18-212ENST00000579061 SLC39A1Q9NY26 324 aa14.51□□□□□ -0.09
SS18-212ENST00000579061 FOXJ2Q9P0K8 574 aa14.51□□□□□ -0.09
SS18-212ENST00000579061 RALYQ9UKM9 306 aaKnown RBP14.51□□□□□ -0.09
SS18-212ENST00000579061 COLEC10Q9Y6Z7 277 aa14.51□□□□□ -0.09
SS18-212ENST00000579061 MGAQ8IWI9 3026 aa14.5□□□□□ -0.09
SS18-212ENST00000579061 CCDC78A2IDD5 438 aa14.5□□□□□ -0.09
SS18-212ENST00000579061 F8W8V4 182 aa14.5□□□□□ -0.09
SS18-212ENST00000579061 STMND1H3BQB6 276 aa14.5□□□□□ -0.09
SS18-212ENST00000579061 K7ENP7 123 aa14.5□□□□□ -0.09
SS18-212ENST00000579061 CAPN5O15484 640 aaPredicted RBP14.5□□□□□ -0.09
SS18-212ENST00000579061 PRSS56P0CW18 603 aa14.5□□□□□ -0.09
SS18-212ENST00000579061 PPARGP37231 505 aaPredicted RBP14.5□□□□□ -0.09
SS18-212ENST00000579061 VAC14Q08AM6 782 aa14.5□□□□□ -0.09
SS18-212ENST00000579061 CYP1B1Q16678 543 aa14.5□□□□□ -0.09
SS18-212ENST00000579061 DCAF12Q5T6F0 453 aa14.5□□□□□ -0.09
SS18-212ENST00000579061 ARMC3Q5W041 872 aa14.5□□□□□ -0.09
SS18-212ENST00000579061 ZNF449Q6P9G9 518 aa14.5□□□□□ -0.09
SS18-212ENST00000579061 INO80CQ6PI98 192 aaPredicted RBP14.5□□□□□ -0.09
SS18-212ENST00000579061 CEACAM20Q6UY09 585 aa14.5□□□□□ -0.09
SS18-212ENST00000579061 ZFAND4Q86XD8 727 aa14.5□□□□□ -0.09
SS18-212ENST00000579061 FAM129CQ86XR2 697 aa14.5□□□□□ -0.09
SS18-212ENST00000579061 SLC35F6Q8N357 371 aa14.5□□□□□ -0.09
SS18-212ENST00000579061 OR4L1Q8NH43 312 aa14.5□□□□□ -0.09
SS18-212ENST00000579061 NAT14Q8WUY8 206 aa14.5□□□□□ -0.09
SS18-212ENST00000579061 RSC1A1Q92681 617 aa14.5□□□□□ -0.09
SS18-212ENST00000579061 PDLIM2Q96JY6 352 aa14.5□□□□□ -0.09
SS18-212ENST00000579061 RMDN2Q96LZ7 410 aa14.5□□□□□ -0.09
SS18-212ENST00000579061 TGM7Q96PF1 710 aa14.5□□□□□ -0.09
SS18-212ENST00000579061 UBL7Q96S82 380 aaPredicted RBP14.5□□□□□ -0.09
SS18-212ENST00000579061 ZNF768Q9H5H4 540 aaKnown RBP14.5□□□□□ -0.09
SS18-212ENST00000579061 KIR3DX1Q9H7L2 352 aa14.5□□□□□ -0.09
SS18-212ENST00000579061 IMP3Q9NV31 184 aaKnown RBP14.5□□□□□ -0.09
SS18-212ENST00000579061 SMARCAL1Q9NZC9 954 aa14.5□□□□□ -0.09
SS18-212ENST00000579061 BFARQ9NZS9 450 aa14.5□□□□□ -0.09
SS18-212ENST00000579061 SEMA5BQ9P283 1151 aa14.5□□□□□ -0.09
SS18-212ENST00000579061 SLC2A6Q9UGQ3 507 aa14.5□□□□□ -0.09
SS18-212ENST00000579061 PCDHB11Q9Y5F2 797 aa14.5□□□□□ -0.09
SS18-212ENST00000579061 B3GALT1Q9Y5Z6 326 aa14.5□□□□□ -0.09
SS18-212ENST00000579061 OR51F1A6NGY5 319 aa14.49□□□□□ -0.09
SS18-212ENST00000579061 PGRMC1O00264 195 aaKnown RBP14.49□□□□□ -0.09
SS18-212ENST00000579061 CES2O00748 559 aa14.49□□□□□ -0.09
SS18-212ENST00000579061 LIN7AO14910 233 aaPredicted RBP14.49□□□□□ -0.09
SS18-212ENST00000579061 KIF5CO60282 957 aa14.49□□□□□ -0.09
SS18-212ENST00000579061 GOT2P00505 430 aaKnown RBP14.49□□□□□ -0.09
SS18-212ENST00000579061 POLBP06746 335 aa14.49□□□□□ -0.09
SS18-212ENST00000579061 MAGEA6P43360 314 aa14.49□□□□□ -0.09
SS18-212ENST00000579061 PRAMEP78395 509 aa14.49□□□□□ -0.09
SS18-212ENST00000579061 GSE1Q14687 1217 aa14.49□□□□□ -0.09
SS18-212ENST00000579061 PLCL1Q15111 1095 aa14.49□□□□□ -0.09
SS18-212ENST00000579061 LRRC8BQ6P9F7 803 aa14.49□□□□□ -0.09
SS18-212ENST00000579061 CCDC81Q6ZN84 652 aa14.49□□□□□ -0.09
SS18-212ENST00000579061 LILRA3Q8N6C8 439 aaPredicted RBP14.49□□□□□ -0.09
SS18-212ENST00000579061 CLDN19Q8N6F1 224 aa14.49□□□□□ -0.09
SS18-212ENST00000579061 LSM14AQ8ND56 463 aaKnown RBP14.49□□□□□ -0.09
SS18-212ENST00000579061 SPDYE1Q8NFV5 336 aaPredicted RBP14.49□□□□□ -0.09
SS18-212ENST00000579061 ACTRT1Q8TDG2 376 aa14.49□□□□□ -0.09
SS18-212ENST00000579061 KLHL6Q8WZ60 621 aa14.49□□□□□ -0.09
SS18-212ENST00000579061 MAGOHBQ96A72 148 aaKnown RBP14.49□□□□□ -0.09
SS18-212ENST00000579061 ZNF778Q96MU6 729 aa14.49□□□□□ -0.09
SS18-212ENST00000579061 OR52A5Q9H2C5 316 aa14.49□□□□□ -0.09
SS18-212ENST00000579061 CPNE5Q9HCH3 593 aa14.49□□□□□ -0.09
SS18-212ENST00000579061 SIDT1Q9NXL6 827 aaKnown RBP14.49□□□□□ -0.09
SS18-212ENST00000579061 FAM8A1Q9UBU6 413 aa14.49□□□□□ -0.09
SS18-212ENST00000579061 KLHL3Q9UH77 587 aa14.49□□□□□ -0.09
SS18-212ENST00000579061 SLC24A2Q9UI40 661 aa14.49□□□□□ -0.09
SS18-212ENST00000579061 CFAP20Q9Y6A4 193 aaKnown RBP14.49□□□□□ -0.09
SS18-212ENST00000579061 LOC400499M0QZD8 3231 aa14.49□□□□□ -0.09
SS18-212ENST00000579061 IFRD1O00458 451 aaPredicted RBP14.48□□□□□ -0.09
SS18-212ENST00000579061 FTH1P02794 183 aa14.48□□□□□ -0.09
SS18-212ENST00000579061 OR56A5P0C7T3 313 aa14.48□□□□□ -0.09
SS18-212ENST00000579061 COILP38432 576 aaPredicted RBP14.48□□□□□ -0.09
SS18-212ENST00000579061 SESN2P58004 480 aaPredicted RBP14.48□□□□□ -0.09
SS18-212ENST00000579061 SARNPP82979 210 aaKnown RBP14.48□□□□□ -0.09
SS18-212ENST00000579061 RHDQ02161 417 aa14.48□□□□□ -0.09
SS18-212ENST00000579061 PLOD1Q02809 727 aaPredicted RBP14.48□□□□□ -0.09
SS18-212ENST00000579061 KCNJ11Q14654 390 aa14.48□□□□□ -0.09
SS18-212ENST00000579061 TGIF1Q15583 401 aa14.48□□□□□ -0.09
SS18-212ENST00000579061 FASTKD1Q53R41 847 aaKnown RBP14.48□□□□□ -0.09
SS18-212ENST00000579061 AARS2Q5JTZ9 985 aaKnown RBP14.48□□□□□ -0.09
SS18-212ENST00000579061 ARHGAP40Q5TG30 622 aa14.48□□□□□ -0.09
SS18-212ENST00000579061 CACHD1Q5VU97 1274 aa14.48□□□□□ -0.09
SS18-212ENST00000579061 ANKS6Q68DC2 871 aa14.48□□□□□ -0.09
SS18-212ENST00000579061 MICALCLQ6ZW33 695 aa14.48□□□□□ -0.09
SS18-212ENST00000579061 ZNF534Q76KX8 674 aa14.48□□□□□ -0.09
SS18-212ENST00000579061 OR6P1Q8NGX9 317 aa14.48□□□□□ -0.09
SS18-212ENST00000579061 UBXN4Q92575 508 aa14.48□□□□□ -0.09
SS18-212ENST00000579061 PMEPA1Q969W9 287 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms