RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 MANEAQ5SRI9 462 aa6.17□□□□□ -1.42
NUP88-212ENST00000576708 CCDC122Q5T0U0 273 aa6.17□□□□□ -1.42
NUP88-212ENST00000576708 ZNF648Q5T619 568 aaPredicted RBP6.17□□□□□ -1.42
NUP88-212ENST00000576708 NCBP2-AS2Q69YL0 99 aa6.17□□□□□ -1.42
NUP88-212ENST00000576708 DENND5AQ6IQ26 1287 aa6.17□□□□□ -1.42
NUP88-212ENST00000576708 USP45Q70EL2 814 aa6.17□□□□□ -1.42
NUP88-212ENST00000576708 B4GALNT4Q76KP1 1039 aa6.17□□□□□ -1.42
NUP88-212ENST00000576708 PIM3Q86V86 326 aa6.17□□□□□ -1.42
NUP88-212ENST00000576708 SPPL2CQ8IUH8 684 aa6.17□□□□□ -1.42
NUP88-212ENST00000576708 BBS5Q8N3I7 341 aa6.17□□□□□ -1.42
NUP88-212ENST00000576708 TEX26Q8N6G2 289 aa6.17□□□□□ -1.42
NUP88-212ENST00000576708 NIPA2Q8N8Q9 360 aa6.17□□□□□ -1.42
NUP88-212ENST00000576708 LPCAT1Q8NF37 534 aa6.17□□□□□ -1.42
NUP88-212ENST00000576708 ARRDC2Q8TBH0 407 aa6.17□□□□□ -1.42
NUP88-212ENST00000576708 FAM71BQ8TC56 605 aa6.17□□□□□ -1.42
NUP88-212ENST00000576708 KIAA1524Q8TCG1 905 aa6.17□□□□□ -1.42
NUP88-212ENST00000576708 NSMCE1Q8WV22 266 aa6.17□□□□□ -1.42
NUP88-212ENST00000576708 TEKT4Q8WW24 435 aa6.17□□□□□ -1.42
NUP88-212ENST00000576708 HTR3CQ8WXA8 447 aa6.17□□□□□ -1.42
NUP88-212ENST00000576708 AP2M1Q96CW1 435 aa6.17□□□□□ -1.42
NUP88-212ENST00000576708 SGF29Q96ES7 293 aa6.17□□□□□ -1.42
NUP88-212ENST00000576708 MED8Q96G25 268 aa6.17□□□□□ -1.42
NUP88-212ENST00000576708 KIRREL1Q96J84 757 aa6.17□□□□□ -1.42
NUP88-212ENST00000576708 OR2M4Q96R27 311 aa6.17□□□□□ -1.42
NUP88-212ENST00000576708 WDR24Q96S15 920 aa6.17□□□□□ -1.42
NUP88-212ENST00000576708 CMKLR1Q99788 373 aa6.17□□□□□ -1.42
NUP88-212ENST00000576708 RIOK2Q9BVS4 552 aaKnown RBP6.17□□□□□ -1.42
NUP88-212ENST00000576708 PACSIN1Q9BY11 444 aa6.17□□□□□ -1.42
NUP88-212ENST00000576708 TRIM4Q9C037 500 aa6.17□□□□□ -1.42
NUP88-212ENST00000576708 BRD8Q9H0E9 1235 aa6.17□□□□□ -1.42
NUP88-212ENST00000576708 ARFGAP3Q9NP61 516 aa6.17□□□□□ -1.42
NUP88-212ENST00000576708 RBM22Q9NW64 420 aaKnown RBP eCLIP6.17□□□□□ -1.42
NUP88-212ENST00000576708 TRNAU1APQ9NX07 287 aaKnown RBP6.17□□□□□ -1.42
NUP88-212ENST00000576708 OCIAD1Q9NX40 245 aa6.17□□□□□ -1.42
NUP88-212ENST00000576708 IP6K2Q9UHH9 426 aa6.17□□□□□ -1.42
NUP88-212ENST00000576708 TMEFF2Q9UIK5 374 aaPredicted RBP6.17□□□□□ -1.42
NUP88-212ENST00000576708 PPIL1Q9Y3C6 166 aa6.17□□□□□ -1.42
NUP88-212ENST00000576708 SCN8AQ9UQD0 1980 aa6.17□□□□□ -1.42
NUP88-212ENST00000576708 CFAP46Q8IYW2 2715 aa6.16□□□□□ -1.42
NUP88-212ENST00000576708 IGHV1OR21-1A0A087WYE8 117 aa6.16□□□□□ -1.42
NUP88-212ENST00000576708 A0A0J9YYE9 177 aa6.16□□□□□ -1.42
NUP88-212ENST00000576708 SYCE3A1L190 88 aa6.16□□□□□ -1.42
NUP88-212ENST00000576708 BLACEA4D250 179 aa6.16□□□□□ -1.42
NUP88-212ENST00000576708 A8MU76 341 aa6.16□□□□□ -1.42
NUP88-212ENST00000576708 MYO1FO00160 1098 aa6.16□□□□□ -1.42
NUP88-212ENST00000576708 PSMD11O00231 422 aa6.16□□□□□ -1.42
NUP88-212ENST00000576708 MATN3O15232 486 aa6.16□□□□□ -1.42
NUP88-212ENST00000576708 SLC28A2O43868 658 aa6.16□□□□□ -1.42
NUP88-212ENST00000576708 ASMTLO95671 621 aa6.16□□□□□ -1.42
NUP88-212ENST00000576708 JCHAINP01591 159 aa6.16□□□□□ -1.42
NUP88-212ENST00000576708 TRBC1P01850 177 aa6.16□□□□□ -1.42
NUP88-212ENST00000576708 SERPING1P05155 500 aa6.16□□□□□ -1.42
NUP88-212ENST00000576708 HLA-DQB2P05538 268 aa6.16□□□□□ -1.42
NUP88-212ENST00000576708 ITGB6P18564 788 aa6.16□□□□□ -1.42
NUP88-212ENST00000576708 PAMP19021 973 aa6.16□□□□□ -1.42
NUP88-212ENST00000576708 TEAD1P28347 426 aa6.16□□□□□ -1.42
NUP88-212ENST00000576708 SERPINB6P35237 376 aa6.16□□□□□ -1.42
NUP88-212ENST00000576708 DEKP35659 375 aaKnown RBP6.16□□□□□ -1.42
NUP88-212ENST00000576708 GARSP41250 739 aaKnown RBP6.16□□□□□ -1.42
NUP88-212ENST00000576708 PPM1FP49593 454 aaPredicted RBP6.16□□□□□ -1.42
NUP88-212ENST00000576708 STC1P52823 247 aa6.16□□□□□ -1.42
NUP88-212ENST00000576708 LIMK2P53671 638 aa6.16□□□□□ -1.42
NUP88-212ENST00000576708 EPHB1P54762 984 aa6.16□□□□□ -1.42
NUP88-212ENST00000576708 UBASH3AP57075 661 aa6.16□□□□□ -1.42
NUP88-212ENST00000576708 ZBED6P86452 979 aa6.16□□□□□ -1.42
NUP88-212ENST00000576708 CHRNEQ04844 493 aa6.16□□□□□ -1.42
NUP88-212ENST00000576708 DPTQ07507 201 aa6.16□□□□□ -1.42
NUP88-212ENST00000576708 NR1D2Q14995 579 aa6.16□□□□□ -1.42
NUP88-212ENST00000576708 CLCA4Q14CN2 919 aa6.16□□□□□ -1.42
NUP88-212ENST00000576708 PAFAH1B3Q15102 231 aaKnown RBP6.16□□□□□ -1.42
NUP88-212ENST00000576708 TBR1Q16650 682 aa6.16□□□□□ -1.42
NUP88-212ENST00000576708 PYCR3Q53H96 274 aa6.16□□□□□ -1.42
NUP88-212ENST00000576708 ANKRD20A8PQ5CZ79 823 aa6.16□□□□□ -1.42
NUP88-212ENST00000576708 FIGNQ5HY92 759 aa6.16□□□□□ -1.42
NUP88-212ENST00000576708 HLA-DQA1Q5Y7H0 255 aa6.16□□□□□ -1.42
NUP88-212ENST00000576708 ALKBH5Q6P6C2 394 aaKnown RBP6.16□□□□□ -1.42
NUP88-212ENST00000576708 CYP2R1Q6VVX0 501 aa6.16□□□□□ -1.42
NUP88-212ENST00000576708 ATG4DQ86TL0 474 aaPredicted RBP6.16□□□□□ -1.42
NUP88-212ENST00000576708 PQLC3Q8N755 202 aa6.16□□□□□ -1.42
NUP88-212ENST00000576708 KCTD6Q8NC69 237 aa6.16□□□□□ -1.42
NUP88-212ENST00000576708 ABHD4Q8TB40 342 aa6.16□□□□□ -1.42
NUP88-212ENST00000576708 ZNF564Q8TBZ8 553 aaPredicted RBP6.16□□□□□ -1.42
NUP88-212ENST00000576708 SLC37A2Q8TED4 501 aa6.16□□□□□ -1.42
NUP88-212ENST00000576708 MAML1Q92585 1016 aa6.16□□□□□ -1.42
NUP88-212ENST00000576708 ART4Q93070 314 aa6.16□□□□□ -1.42
NUP88-212ENST00000576708 TDRD1Q9BXT4 1180 aaKnown RBP6.16□□□□□ -1.42
NUP88-212ENST00000576708 POLR1EQ9GZS1 481 aaKnown RBP6.16□□□□□ -1.42
NUP88-212ENST00000576708 DTLQ9NZJ0 730 aa6.16□□□□□ -1.42
NUP88-212ENST00000576708 ZNHIT2Q9UHR6 403 aa6.16□□□□□ -1.42
NUP88-212ENST00000576708 ACSL6Q9UKU0 697 aa6.16□□□□□ -1.42
NUP88-212ENST00000576708 CNOT6Q9ULM6 557 aaKnown RBP6.16□□□□□ -1.42
NUP88-212ENST00000576708 CAPN11Q9UMQ6 739 aa6.16□□□□□ -1.42
NUP88-212ENST00000576708 NENFQ9UMX5 172 aa6.16□□□□□ -1.42
NUP88-212ENST00000576708 KCNK6Q9Y257 313 aa6.16□□□□□ -1.42
NUP88-212ENST00000576708 ZNF462Q96JM2 2506 aa6.15□□□□□ -1.42
NUP88-212ENST00000576708 A0A1W2PQJ5 194 aa6.15□□□□□ -1.42
NUP88-212ENST00000576708 CAPN8A6NHC0 703 aa6.15□□□□□ -1.42
NUP88-212ENST00000576708 EFCAB7A8K855 629 aa6.15□□□□□ -1.42
NUP88-212ENST00000576708 KCNK1O00180 336 aa6.15□□□□□ -1.42
NUP88-212ENST00000576708 NRDCO43847 1150 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms