RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 PIDD1Q9HB75 910 aa13.81□□□□□ -0.2
VPS33B-208ENST00000574755 ZDHHC7Q9NXF8 308 aa13.81□□□□□ -0.2
VPS33B-208ENST00000574755 ZMYM5Q9UJ78 669 aa13.81□□□□□ -0.2
VPS33B-208ENST00000574755 IGLV3-16A0A075B6K0 115 aa13.8□□□□□ -0.2
VPS33B-208ENST00000574755 C5orf67F2Z3F1 127 aa13.8□□□□□ -0.2
VPS33B-208ENST00000574755 CASQ2O14958 399 aaPredicted RBP13.8□□□□□ -0.2
VPS33B-208ENST00000574755 SYNCRIPO60506 623 aaKnown RBP13.8□□□□□ -0.2
VPS33B-208ENST00000574755 ARHGEF15O94989 841 aa13.8□□□□□ -0.2
VPS33B-208ENST00000574755 CYP2A6P11509 494 aaPredicted RBP13.8□□□□□ -0.2
VPS33B-208ENST00000574755 HMOX2P30519 316 aa13.8□□□□□ -0.2
VPS33B-208ENST00000574755 HTR6P50406 440 aa13.8□□□□□ -0.2
VPS33B-208ENST00000574755 LBX1P52954 281 aa13.8□□□□□ -0.2
VPS33B-208ENST00000574755 HSPA14Q0VDF9 509 aa13.8□□□□□ -0.2
VPS33B-208ENST00000574755 GRIK2Q13002 908 aa13.8□□□□□ -0.2
VPS33B-208ENST00000574755 TRAF3Q13114 568 aa13.8□□□□□ -0.2
VPS33B-208ENST00000574755 GRAMD1BQ3KR37 738 aa13.8□□□□□ -0.2
VPS33B-208ENST00000574755 IRGCQ6NXR0 463 aa13.8□□□□□ -0.2
VPS33B-208ENST00000574755 Q6ZSR9 355 aa13.8□□□□□ -0.2
VPS33B-208ENST00000574755 PDSS2Q86YH6 399 aa13.8□□□□□ -0.2
VPS33B-208ENST00000574755 C7orf61Q8IZ16 206 aa13.8□□□□□ -0.2
VPS33B-208ENST00000574755 SKA2Q8WVK7 121 aaPredicted RBP13.8□□□□□ -0.2
VPS33B-208ENST00000574755 SPDL1Q96EA4 605 aa13.8□□□□□ -0.2
VPS33B-208ENST00000574755 TEX37Q96LM6 180 aa13.8□□□□□ -0.2
VPS33B-208ENST00000574755 LRGUKQ96M69 825 aa13.8□□□□□ -0.2
VPS33B-208ENST00000574755 TMEM79Q9BSE2 394 aa13.8□□□□□ -0.2
VPS33B-208ENST00000574755 MTG2Q9H4K7 406 aa13.8□□□□□ -0.2
VPS33B-208ENST00000574755 RDH14Q9HBH5 336 aa13.8□□□□□ -0.2
VPS33B-208ENST00000574755 CD300AQ9UGN4 299 aa13.8□□□□□ -0.2
VPS33B-208ENST00000574755 ST14Q9Y5Y6 855 aa13.8□□□□□ -0.2
VPS33B-208ENST00000574755 C5orf42Q9H799 3197 aa13.8□□□□□ -0.2
VPS33B-208ENST00000574755 TCF3P15923 654 aa13.8□□□□□ -0.2
VPS33B-208ENST00000574755 EN2P19622 333 aaPredicted RBP13.8□□□□□ -0.2
VPS33B-208ENST00000574755 VIPR1P32241 457 aa13.8□□□□□ -0.2
VPS33B-208ENST00000574755 DGKGP49619 791 aa13.8□□□□□ -0.2
VPS33B-208ENST00000574755 DHCR24Q15392 516 aa13.8□□□□□ -0.2
VPS33B-208ENST00000574755 MBOAT1Q6ZNC8 495 aa13.8□□□□□ -0.2
VPS33B-208ENST00000574755 ITFG1Q8TB96 612 aa13.8□□□□□ -0.2
VPS33B-208ENST00000574755 UCMAQ8WVF2 138 aa13.8□□□□□ -0.2
VPS33B-208ENST00000574755 SCAMP4Q969E2 229 aa13.8□□□□□ -0.2
VPS33B-208ENST00000574755 ZNF707Q96C28 371 aaPredicted RBP13.8□□□□□ -0.2
VPS33B-208ENST00000574755 HOPXQ9BPY8 73 aaPredicted RBP13.8□□□□□ -0.2
VPS33B-208ENST00000574755 BRINP2Q9C0B6 783 aa13.8□□□□□ -0.2
VPS33B-208ENST00000574755 COPS7BQ9H9Q2 264 aaPredicted RBP13.8□□□□□ -0.2
VPS33B-208ENST00000574755 GID8Q9NWU2 228 aa13.8□□□□□ -0.2
VPS33B-208ENST00000574755 IL36AQ9UHA7 158 aa13.8□□□□□ -0.2
VPS33B-208ENST00000574755 DPP7Q9UHL4 492 aa13.8□□□□□ -0.2
VPS33B-208ENST00000574755 TMPRSS11EQ9UL52 423 aa13.8□□□□□ -0.2
VPS33B-208ENST00000574755 LIN7AO14910 233 aaPredicted RBP13.79□□□□□ -0.2
VPS33B-208ENST00000574755 MTX2O75431 263 aa13.79□□□□□ -0.2
VPS33B-208ENST00000574755 SLC22A3O75751 556 aa13.79□□□□□ -0.2
VPS33B-208ENST00000574755 ATP1B2P14415 290 aaPredicted RBP13.79□□□□□ -0.2
VPS33B-208ENST00000574755 UFM1P61960 85 aa13.79□□□□□ -0.2
VPS33B-208ENST00000574755 MRPS35P82673 323 aaKnown RBP13.79□□□□□ -0.2
VPS33B-208ENST00000574755 CREB5Q02930 508 aa13.79□□□□□ -0.2
VPS33B-208ENST00000574755 RCAN2Q14206 197 aa13.79□□□□□ -0.2
VPS33B-208ENST00000574755 NR6A1Q15406 480 aa13.79□□□□□ -0.2
VPS33B-208ENST00000574755 SFT2D3Q587I9 215 aa13.79□□□□□ -0.2
VPS33B-208ENST00000574755 HSD11B1LQ7Z5J1 315 aa13.79□□□□□ -0.2
VPS33B-208ENST00000574755 PLCD3Q8N3E9 789 aa13.79□□□□□ -0.2
VPS33B-208ENST00000574755 CELF5Q8N6W0 485 aaKnown RBP13.79□□□□□ -0.2
VPS33B-208ENST00000574755 VPS33AQ96AX1 596 aa13.79□□□□□ -0.2
VPS33B-208ENST00000574755 DCUN1D1Q96GG9 259 aa13.79□□□□□ -0.2
VPS33B-208ENST00000574755 LRRC3BQ96PB8 259 aa13.79□□□□□ -0.2
VPS33B-208ENST00000574755 GPATCH1Q9BRR8 931 aaKnown RBP13.79□□□□□ -0.2
VPS33B-208ENST00000574755 FAM83DQ9H4H8 585 aa13.79□□□□□ -0.2
VPS33B-208ENST00000574755 PCDH12Q9NPG4 1184 aa13.79□□□□□ -0.2
VPS33B-208ENST00000574755 DUS2Q9NX74 493 aaKnown RBP13.79□□□□□ -0.2
VPS33B-208ENST00000574755 ARL15Q9NXU5 204 aa13.79□□□□□ -0.2
VPS33B-208ENST00000574755 KLHL42Q9P2K6 505 aa13.79□□□□□ -0.2
VPS33B-208ENST00000574755 SUN2Q9UH99 717 aa13.79□□□□□ -0.2
VPS33B-208ENST00000574755 MBD1Q9UIS9 605 aaPredicted RBP13.79□□□□□ -0.2
VPS33B-208ENST00000574755 A0A1W2PP18 115 aa13.79□□□□□ -0.2
VPS33B-208ENST00000574755 K7EPI3 171 aa13.79□□□□□ -0.2
VPS33B-208ENST00000574755 CYP17A1P05093 508 aa13.79□□□□□ -0.2
VPS33B-208ENST00000574755 CTSLP07711 333 aa13.79□□□□□ -0.2
VPS33B-208ENST00000574755 ANXA5P08758 320 aa13.79□□□□□ -0.2
VPS33B-208ENST00000574755 ADH5P11766 374 aa13.79□□□□□ -0.2
VPS33B-208ENST00000574755 XPAP23025 273 aaPredicted RBP13.79□□□□□ -0.2
VPS33B-208ENST00000574755 NFKBIAP25963 317 aa13.79□□□□□ -0.2
VPS33B-208ENST00000574755 RPIAP49247 311 aa13.79□□□□□ -0.2
VPS33B-208ENST00000574755 MRPL19P49406 292 aaKnown RBP13.79□□□□□ -0.2
VPS33B-208ENST00000574755 AQP4P55087 323 aa13.79□□□□□ -0.2
VPS33B-208ENST00000574755 TRAP1Q12931 704 aaKnown RBP13.79□□□□□ -0.2
VPS33B-208ENST00000574755 BOP1Q14137 746 aaKnown RBP13.79□□□□□ -0.2
VPS33B-208ENST00000574755 CAPRIN1Q14444 709 aaKnown RBP13.79□□□□□ -0.2
VPS33B-208ENST00000574755 ABRAXAS2Q15018 415 aa13.79□□□□□ -0.2
VPS33B-208ENST00000574755 POM121L1PQ3SYA9 428 aa13.79□□□□□ -0.2
VPS33B-208ENST00000574755 PDCD4Q53EL6 469 aaKnown RBP13.79□□□□□ -0.2
VPS33B-208ENST00000574755 TCEAL5Q5H9L2 206 aa13.79□□□□□ -0.2
VPS33B-208ENST00000574755 COQ5Q5HYK3 327 aa13.79□□□□□ -0.2
VPS33B-208ENST00000574755 RARS2Q5T160 578 aaKnown RBP13.79□□□□□ -0.2
VPS33B-208ENST00000574755 PRMT9Q6P2P2 845 aa13.79□□□□□ -0.2
VPS33B-208ENST00000574755 Q6ZVL8 140 aa13.79□□□□□ -0.2
VPS33B-208ENST00000574755 SFRP1Q8N474 314 aa13.79□□□□□ -0.2
VPS33B-208ENST00000574755 ZNF366Q8N895 744 aa13.79□□□□□ -0.2
VPS33B-208ENST00000574755 TSPEARQ8WU66 669 aa13.79□□□□□ -0.2
VPS33B-208ENST00000574755 MTIF3Q9H2K0 278 aaKnown RBP13.79□□□□□ -0.2
VPS33B-208ENST00000574755 CCDC154A6NI56 674 aa13.78□□□□□ -0.2
VPS33B-208ENST00000574755 UPK3BL1B0FP48 263 aa13.78□□□□□ -0.2
VPS33B-208ENST00000574755 UPK3BL2E5RIL1 263 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms