RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 ARHGAP8P85298 464 aa23.59■■□□□ 1.37
ATPAF1-213ENST00000574428 NFE2L1Q14494 772 aa23.59■■□□□ 1.37
ATPAF1-213ENST00000574428 ACAP2Q15057 778 aa23.59■■□□□ 1.37
ATPAF1-213ENST00000574428 CCDC153Q494R4 210 aa23.59■■□□□ 1.37
ATPAF1-213ENST00000574428 PYCR3Q53H96 274 aa23.59■■□□□ 1.37
ATPAF1-213ENST00000574428 TECRLQ5HYJ1 363 aa23.59■■□□□ 1.37
ATPAF1-213ENST00000574428 HHATQ5VTY9 493 aa23.59■■□□□ 1.37
ATPAF1-213ENST00000574428 XKR5Q6UX68 686 aa23.59■■□□□ 1.37
ATPAF1-213ENST00000574428 FAM83HQ6ZRV2 1179 aaPredicted RBP23.59■■□□□ 1.37
ATPAF1-213ENST00000574428 CHST15Q7LFX5 561 aaPredicted RBP23.59■■□□□ 1.37
ATPAF1-213ENST00000574428 ISCA2Q86U28 154 aa23.59■■□□□ 1.37
ATPAF1-213ENST00000574428 AMZ2Q86W34 360 aa23.59■■□□□ 1.37
ATPAF1-213ENST00000574428 RGL4Q8IZJ4 473 aa23.59■■□□□ 1.37
ATPAF1-213ENST00000574428 TSACCQ96A04 125 aaPredicted RBP23.59■■□□□ 1.37
ATPAF1-213ENST00000574428 KLHDC7BQ96G42 594 aa23.59■■□□□ 1.37
ATPAF1-213ENST00000574428 SCARF2Q96GP6 870 aaPredicted RBP23.59■■□□□ 1.37
ATPAF1-213ENST00000574428 CARS2Q9HA77 564 aaKnown RBP23.59■■□□□ 1.37
ATPAF1-213ENST00000574428 TM9SF3Q9HD45 589 aa23.59■■□□□ 1.37
ATPAF1-213ENST00000574428 INTS9Q9NV88 658 aaKnown RBP23.59■■□□□ 1.37
ATPAF1-213ENST00000574428 KLQ9UEF7 1012 aa23.59■■□□□ 1.37
ATPAF1-213ENST00000574428 GPSM3Q9Y4H4 160 aa23.59■■□□□ 1.37
ATPAF1-213ENST00000574428 SLC5A10A0PJK1 596 aa23.58■■□□□ 1.37
ATPAF1-213ENST00000574428 MGAT4DA6NG13 374 aa23.58■■□□□ 1.37
ATPAF1-213ENST00000574428 GPC4O75487 556 aa23.58■■□□□ 1.37
ATPAF1-213ENST00000574428 WNT1P04628 370 aa23.58■■□□□ 1.37
ATPAF1-213ENST00000574428 CBSLP0DN79 551 aa23.58■■□□□ 1.37
ATPAF1-213ENST00000574428 ACP5P13686 325 aa23.58■■□□□ 1.37
ATPAF1-213ENST00000574428 CBSP35520 551 aa23.58■■□□□ 1.37
ATPAF1-213ENST00000574428 ATP6V0D1P61421 351 aa23.58■■□□□ 1.37
ATPAF1-213ENST00000574428 OR4D1Q15615 310 aa23.58■■□□□ 1.37
ATPAF1-213ENST00000574428 RD3Q7Z3Z2 195 aa23.58■■□□□ 1.37
ATPAF1-213ENST00000574428 MYO1HQ8N1T3 1032 aa23.58■■□□□ 1.37
ATPAF1-213ENST00000574428 TMEM151AQ8N4L1 468 aa23.58■■□□□ 1.37
ATPAF1-213ENST00000574428 OXR1Q8N573 874 aa23.58■■□□□ 1.37
ATPAF1-213ENST00000574428 HM13Q8TCT9 377 aa23.58■■□□□ 1.37
ATPAF1-213ENST00000574428 SKA2Q8WVK7 121 aaPredicted RBP23.58■■□□□ 1.37
ATPAF1-213ENST00000574428 TMEM159Q96B96 161 aa23.58■■□□□ 1.37
ATPAF1-213ENST00000574428 PDLIM5Q96HC4 596 aaKnown RBP23.58■■□□□ 1.37
ATPAF1-213ENST00000574428 COG4Q9H9E3 785 aa23.58■■□□□ 1.37
ATPAF1-213ENST00000574428 GPR27Q9NS67 375 aa23.58■■□□□ 1.37
ATPAF1-213ENST00000574428 TNFRSF10AO00220 468 aa23.57■■□□□ 1.36
ATPAF1-213ENST00000574428 HRO43593 1189 aa23.57■■□□□ 1.36
ATPAF1-213ENST00000574428 SBK3P0C264 359 aa23.57■■□□□ 1.36
ATPAF1-213ENST00000574428 CD38P28907 300 aa23.57■■□□□ 1.36
ATPAF1-213ENST00000574428 RACK1P63244 317 aaKnown RBP23.57■■□□□ 1.36
ATPAF1-213ENST00000574428 TSNQ15631 228 aaKnown RBP23.57■■□□□ 1.36
ATPAF1-213ENST00000574428 ALG11Q2TAA5 492 aa23.57■■□□□ 1.36
ATPAF1-213ENST00000574428 C1orf216Q8TAB5 229 aa23.57■■□□□ 1.36
ATPAF1-213ENST00000574428 DNASE2BQ8WZ79 361 aa23.57■■□□□ 1.36
ATPAF1-213ENST00000574428 MRPL46Q9H2W6 279 aaKnown RBP23.57■■□□□ 1.36
ATPAF1-213ENST00000574428 C11orf16Q9NQ32 467 aa23.57■■□□□ 1.36
ATPAF1-213ENST00000574428 PLEKHM1Q9Y4G2 1056 aa23.57■■□□□ 1.36
ATPAF1-213ENST00000574428 C17orf113A0A1B0GUU1 675 aa23.57■■□□□ 1.36
ATPAF1-213ENST00000574428 A0A1W2PR77 199 aa23.57■■□□□ 1.36
ATPAF1-213ENST00000574428 LIN7AO14910 233 aaPredicted RBP23.57■■□□□ 1.36
ATPAF1-213ENST00000574428 SLCO2B1O94956 709 aa23.57■■□□□ 1.36
ATPAF1-213ENST00000574428 GSTM1P09488 218 aa23.57■■□□□ 1.36
ATPAF1-213ENST00000574428 ENO3P13929 434 aaPredicted RBP23.57■■□□□ 1.36
ATPAF1-213ENST00000574428 PDHA2P29803 388 aa23.57■■□□□ 1.36
ATPAF1-213ENST00000574428 GSTM4Q03013 218 aa23.57■■□□□ 1.36
ATPAF1-213ENST00000574428 PTK2BQ14289 1009 aa23.57■■□□□ 1.36
ATPAF1-213ENST00000574428 WDR45BQ5MNZ6 344 aa23.57■■□□□ 1.36
ATPAF1-213ENST00000574428 CYHR1Q6ZMK1 362 aa23.57■■□□□ 1.36
ATPAF1-213ENST00000574428 TAX1BP1Q86VP1 789 aa23.57■■□□□ 1.36
ATPAF1-213ENST00000574428 MFSD2AQ8NA29 543 aa23.57■■□□□ 1.36
ATPAF1-213ENST00000574428 GLMNQ92990 594 aa23.57■■□□□ 1.36
ATPAF1-213ENST00000574428 KIAA1191Q96A73 305 aa23.57■■□□□ 1.36
ATPAF1-213ENST00000574428 MRPL57Q9BQC6 102 aaKnown RBP23.57■■□□□ 1.36
ATPAF1-213ENST00000574428 MECRQ9BV79 373 aa23.57■■□□□ 1.36
ATPAF1-213ENST00000574428 CAAP1Q9H8G2 361 aa23.57■■□□□ 1.36
ATPAF1-213ENST00000574428 WDR91A4D1P6 747 aa23.56■■□□□ 1.36
ATPAF1-213ENST00000574428 TNFRSF10CO14798 259 aa23.56■■□□□ 1.36
ATPAF1-213ENST00000574428 RBP1P09455 135 aa23.56■■□□□ 1.36
ATPAF1-213ENST00000574428 DHRS4L1P0CG22 281 aa23.56■■□□□ 1.36
ATPAF1-213ENST00000574428 ITPKAP23677 461 aa23.56■■□□□ 1.36
ATPAF1-213ENST00000574428 LSP1P33241 339 aa23.56■■□□□ 1.36
ATPAF1-213ENST00000574428 KCNC1P48547 511 aa23.56■■□□□ 1.36
ATPAF1-213ENST00000574428 SERPINB4P48594 390 aa23.56■■□□□ 1.36
ATPAF1-213ENST00000574428 DHPSP49366 369 aaPredicted RBP23.56■■□□□ 1.36
ATPAF1-213ENST00000574428 SRP54P61011 504 aaKnown RBP23.56■■□□□ 1.36
ATPAF1-213ENST00000574428 ANGPT1Q15389 498 aa23.56■■□□□ 1.36
ATPAF1-213ENST00000574428 TCEA2Q15560 299 aa23.56■■□□□ 1.36
ATPAF1-213ENST00000574428 PMS2CLQ68D20 193 aa23.56■■□□□ 1.36
ATPAF1-213ENST00000574428 FAM174AQ8TBP5 190 aa23.56■■□□□ 1.36
ATPAF1-213ENST00000574428 EXT2Q93063 718 aa23.56■■□□□ 1.36
ATPAF1-213ENST00000574428 OR2M4Q96R27 311 aa23.56■■□□□ 1.36
ATPAF1-213ENST00000574428 TFB2MQ9H5Q4 396 aaKnown RBP23.56■■□□□ 1.36
ATPAF1-213ENST00000574428 KLC4Q9NSK0 619 aa23.56■■□□□ 1.36
ATPAF1-213ENST00000574428 DNMT3AQ9Y6K1 912 aaPredicted RBP23.56■■□□□ 1.36
ATPAF1-213ENST00000574428 THADAQ6YHU6 1953 aa23.56■■□□□ 1.36
ATPAF1-213ENST00000574428 SPTY2D1-AS1A0A0U1RR47 76 aa23.55■■□□□ 1.36
ATPAF1-213ENST00000574428 ERICH4A6NGS2 130 aa23.55■■□□□ 1.36
ATPAF1-213ENST00000574428 EIF3FO00303 357 aaPredicted RBP23.55■■□□□ 1.36
ATPAF1-213ENST00000574428 FZD2Q14332 565 aa23.55■■□□□ 1.36
ATPAF1-213ENST00000574428 C11orf74Q86VG3 221 aa23.55■■□□□ 1.36
ATPAF1-213ENST00000574428 HID1Q8IV36 788 aa23.55■■□□□ 1.36
ATPAF1-213ENST00000574428 DYDC1Q8WWB3 177 aa23.55■■□□□ 1.36
ATPAF1-213ENST00000574428 NELL1Q92832 810 aa23.55■■□□□ 1.36
ATPAF1-213ENST00000574428 TIMM29Q9BSF4 260 aa23.55■■□□□ 1.36
ATPAF1-213ENST00000574428 ADAMTS6Q9UKP5 1117 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms