RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 PKNOX1P55347 436 aa27.93■■■□□ 2.06
CTDNEP1-210ENST00000574322 DPTQ07507 201 aa27.93■■■□□ 2.06
CTDNEP1-210ENST00000574322 TTC31Q49AM3 519 aaPredicted RBP27.93■■■□□ 2.06
CTDNEP1-210ENST00000574322 KHDC1Q4VXA5 237 aaKnown RBP27.93■■■□□ 2.06
CTDNEP1-210ENST00000574322 FAM46CQ5VWP2 391 aa27.93■■■□□ 2.06
CTDNEP1-210ENST00000574322 TMEM198Q66K66 360 aa27.93■■■□□ 2.06
CTDNEP1-210ENST00000574322 SULT1C3Q6IMI6 304 aa27.93■■■□□ 2.06
CTDNEP1-210ENST00000574322 EFL1Q7Z2Z2 1120 aaKnown RBP27.93■■■□□ 2.06
CTDNEP1-210ENST00000574322 PACS2Q86VP3 889 aa27.93■■■□□ 2.06
CTDNEP1-210ENST00000574322 FBXO27Q8NI29 283 aa27.93■■■□□ 2.06
CTDNEP1-210ENST00000574322 WRAP53Q9BUR4 548 aaKnown RBP27.93■■■□□ 2.06
CTDNEP1-210ENST00000574322 EIF2B4Q9UI10 523 aaKnown RBP27.93■■■□□ 2.06
CTDNEP1-210ENST00000574322 FTH1P02794 183 aa27.92■■■□□ 2.06
CTDNEP1-210ENST00000574322 ENO2P09104 434 aaPredicted RBP27.92■■■□□ 2.06
CTDNEP1-210ENST00000574322 PIK3R1P27986 724 aa27.92■■■□□ 2.06
CTDNEP1-210ENST00000574322 PHKG1Q16816 387 aa27.92■■■□□ 2.06
CTDNEP1-210ENST00000574322 MMAAQ8IVH4 418 aaKnown RBP27.92■■■□□ 2.06
CTDNEP1-210ENST00000574322 CHCHD4Q8N4Q1 142 aa27.92■■■□□ 2.06
CTDNEP1-210ENST00000574322 FAM13CQ8NE31 585 aa27.92■■■□□ 2.06
CTDNEP1-210ENST00000574322 LENG8Q96PV6 779 aaPredicted RBP27.92■■■□□ 2.06
CTDNEP1-210ENST00000574322 EPHX3Q9H6B9 360 aa27.92■■■□□ 2.06
CTDNEP1-210ENST00000574322 KCNK12Q9HB15 430 aa27.92■■■□□ 2.06
CTDNEP1-210ENST00000574322 CACNA2D2Q9NY47 1150 aa27.92■■■□□ 2.06
CTDNEP1-210ENST00000574322 ASB1Q9Y576 335 aa27.92■■■□□ 2.06
CTDNEP1-210ENST00000574322 STON1Q9Y6Q2 735 aa27.92■■■□□ 2.06
CTDNEP1-210ENST00000574322 THRAP10827 490 aa27.92■■■□□ 2.06
CTDNEP1-210ENST00000574322 FOXA1P55317 472 aa27.92■■■□□ 2.06
CTDNEP1-210ENST00000574322 CDKL1Q00532 357 aa27.92■■■□□ 2.06
CTDNEP1-210ENST00000574322 TTC23LQ6PF05 361 aa27.92■■■□□ 2.06
CTDNEP1-210ENST00000574322 ARHGAP24Q8N264 748 aa27.92■■■□□ 2.06
CTDNEP1-210ENST00000574322 RP9Q8TA86 221 aaKnown RBP27.92■■■□□ 2.06
CTDNEP1-210ENST00000574322 TWIST2Q8WVJ9 160 aa27.92■■■□□ 2.06
CTDNEP1-210ENST00000574322 CATSPER2Q96P56 530 aa27.92■■■□□ 2.06
CTDNEP1-210ENST00000574322 FBRSL1Q9HCM7 1045 aaKnown RBP27.92■■■□□ 2.06
CTDNEP1-210ENST00000574322 ZNF225Q9UK10 706 aa27.92■■■□□ 2.06
CTDNEP1-210ENST00000574322 COPG1Q9Y678 874 aaKnown RBP27.92■■■□□ 2.06
CTDNEP1-210ENST00000574322 A0A1B0GTL3 188 aa27.91■■■□□ 2.06
CTDNEP1-210ENST00000574322 SLC16A5O15375 505 aa27.91■■■□□ 2.06
CTDNEP1-210ENST00000574322 TAPBPO15533 448 aa27.91■■■□□ 2.06
CTDNEP1-210ENST00000574322 GPC4O75487 556 aa27.91■■■□□ 2.06
CTDNEP1-210ENST00000574322 C8GP07360 202 aa27.91■■■□□ 2.06
CTDNEP1-210ENST00000574322 CAMK2GQ13555 558 aaPredicted RBP27.91■■■□□ 2.06
CTDNEP1-210ENST00000574322 FBXO48Q5FWF7 155 aa27.91■■■□□ 2.06
CTDNEP1-210ENST00000574322 DET1Q7L5Y6 550 aa27.91■■■□□ 2.06
CTDNEP1-210ENST00000574322 SYVN1Q86TM6 617 aa27.91■■■□□ 2.06
CTDNEP1-210ENST00000574322 RASGRP3Q8IV61 690 aa27.91■■■□□ 2.06
CTDNEP1-210ENST00000574322 POU5F2Q8N7G0 328 aa27.91■■■□□ 2.06
CTDNEP1-210ENST00000574322 MCUR1Q96AQ8 359 aa27.91■■■□□ 2.06
CTDNEP1-210ENST00000574322 RHBDF1Q96CC6 855 aa27.91■■■□□ 2.06
CTDNEP1-210ENST00000574322 RTKNQ9BST9 563 aa27.91■■■□□ 2.06
CTDNEP1-210ENST00000574322 SLC12A9Q9BXP2 914 aa27.91■■■□□ 2.06
CTDNEP1-210ENST00000574322 CNOT6Q9ULM6 557 aaKnown RBP27.91■■■□□ 2.06
CTDNEP1-210ENST00000574322 ST14Q9Y5Y6 855 aa27.91■■■□□ 2.06
CTDNEP1-210ENST00000574322 ANKRD12Q6UB98 2062 aa27.91■■■□□ 2.06
CTDNEP1-210ENST00000574322 ANTXRLA6NF34 631 aa27.9■■■□□ 2.06
CTDNEP1-210ENST00000574322 MTX2O75431 263 aa27.9■■■□□ 2.06
CTDNEP1-210ENST00000574322 WFS1O76024 890 aa27.9■■■□□ 2.06
CTDNEP1-210ENST00000574322 RECQL5O94762 991 aaPredicted RBP27.9■■■□□ 2.06
CTDNEP1-210ENST00000574322 ATP6V1G2O95670 118 aa27.9■■■□□ 2.06
CTDNEP1-210ENST00000574322 SOD1P00441 154 aa27.9■■■□□ 2.06
CTDNEP1-210ENST00000574322 UROSP10746 265 aa27.9■■■□□ 2.06
CTDNEP1-210ENST00000574322 C6P13671 934 aa27.9■■■□□ 2.06
CTDNEP1-210ENST00000574322 P2RY2P41231 377 aa27.9■■■□□ 2.06
CTDNEP1-210ENST00000574322 SP140Q13342 867 aa27.9■■■□□ 2.06
CTDNEP1-210ENST00000574322 ASB11Q8WXH4 323 aa27.9■■■□□ 2.06
CTDNEP1-210ENST00000574322 RSPH9Q9H1X1 276 aaPredicted RBP27.9■■■□□ 2.06
CTDNEP1-210ENST00000574322 CKAP5Q14008 2032 aa27.9■■■□□ 2.06
CTDNEP1-210ENST00000574322 VPS4BO75351 444 aa27.89■■■□□ 2.06
CTDNEP1-210ENST00000574322 SLCO2B1O94956 709 aa27.89■■■□□ 2.06
CTDNEP1-210ENST00000574322 HNRNPH1P31943 449 aaKnown RBP27.89■■■□□ 2.06
CTDNEP1-210ENST00000574322 PRLHRP49683 370 aa27.89■■■□□ 2.06
CTDNEP1-210ENST00000574322 ATP4BP51164 291 aa27.89■■■□□ 2.06
CTDNEP1-210ENST00000574322 GALK1P51570 392 aa27.89■■■□□ 2.06
CTDNEP1-210ENST00000574322 RAP1GDS1P52306 607 aa27.89■■■□□ 2.06
CTDNEP1-210ENST00000574322 GPRIN3Q6ZVF9 776 aa27.89■■■□□ 2.06
CTDNEP1-210ENST00000574322 PHYKPLQ8IUZ5 450 aa27.89■■■□□ 2.06
CTDNEP1-210ENST00000574322 PHF6Q8IWS0 365 aaKnown RBP eCLIP27.89■■■□□ 2.06
CTDNEP1-210ENST00000574322 ASZ1Q8WWH4 475 aa27.89■■■□□ 2.06
CTDNEP1-210ENST00000574322 ESAMQ96AP7 390 aa27.89■■■□□ 2.06
CTDNEP1-210ENST00000574322 NUS1Q96E22 293 aa27.89■■■□□ 2.06
CTDNEP1-210ENST00000574322 C3orf30Q96M34 536 aa27.89■■■□□ 2.06
CTDNEP1-210ENST00000574322 CCT7Q99832 543 aa27.89■■■□□ 2.06
CTDNEP1-210ENST00000574322 TUBB1Q9H4B7 451 aa27.89■■■□□ 2.06
CTDNEP1-210ENST00000574322 TSR3Q9UJK0 312 aaKnown RBP27.89■■■□□ 2.06
CTDNEP1-210ENST00000574322 FADS3Q9Y5Q0 445 aa27.89■■■□□ 2.06
CTDNEP1-210ENST00000574322 GFYI3L273 518 aa27.89■■■□□ 2.05
CTDNEP1-210ENST00000574322 UBDO15205 165 aa27.89■■■□□ 2.05
CTDNEP1-210ENST00000574322 ASGR2P07307 311 aa27.89■■■□□ 2.05
CTDNEP1-210ENST00000574322 PGM1P36871 562 aa27.89■■■□□ 2.05
CTDNEP1-210ENST00000574322 TMEM115Q12893 351 aaPredicted RBP27.89■■■□□ 2.05
CTDNEP1-210ENST00000574322 WASHC2DQ5SRD0 308 aa27.89■■■□□ 2.05
CTDNEP1-210ENST00000574322 RASGEF1AQ8N9B8 481 aa27.89■■■□□ 2.05
CTDNEP1-210ENST00000574322 KCNA7Q96RP8 456 aa27.89■■■□□ 2.05
CTDNEP1-210ENST00000574322 CD244Q9BZW8 370 aa27.89■■■□□ 2.05
CTDNEP1-210ENST00000574322 PLK4O00444 970 aa27.88■■■□□ 2.05
CTDNEP1-210ENST00000574322 PIP5K1BO14986 540 aa27.88■■■□□ 2.05
CTDNEP1-210ENST00000574322 PRDX3P30048 256 aaKnown RBP27.88■■■□□ 2.05
CTDNEP1-210ENST00000574322 GGT5P36269 586 aa27.88■■■□□ 2.05
CTDNEP1-210ENST00000574322 KIR2DL1P43626 348 aaPredicted RBP27.88■■■□□ 2.05
CTDNEP1-210ENST00000574322 PSMD8P48556 350 aa27.88■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms